BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00002473
         (810 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549326.1| PREDICTED: transcription initiation factor T...   436   e-120
ref|XP_003631761.1| PREDICTED: transcription initiation factor T...   417   e-114
ref|XP_003526182.1| PREDICTED: transcription initiation factor T...   415   e-114
ref|XP_002285276.2| PREDICTED: transcription initiation factor T...   414   e-113
ref|XP_002324907.1| predicted protein [Populus trichocarpa] gi|2...   414   e-113

>ref|XP_003549326.1| PREDICTED: transcription initiation factor TFIID subunit 5-like
            [Glycine max]
          Length = 657

 Score =  436 bits (1122), Expect = e-120
 Identities = 205/221 (92%), Positives = 211/221 (95%)
 Frame = -3

Query: 808  KLNANLVCYKGHNYPVWDVQFSPAGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDC 629
            KLNANLVCYKGHNYP+WDVQFSPAGHYFAS SHDRTARIWSMDRIQPLRIMAGHLSDVDC
Sbjct: 437  KLNANLVCYKGHNYPIWDVQFSPAGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDC 496

Query: 628  VQWHPNCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGT 449
            VQWH NCNYIATGSSDKTVRLWDVQSGECVR+FIGHRSMILSLAMSPDGRYMASGDEDGT
Sbjct: 497  VQWHVNCNYIATGSSDKTVRLWDVQSGECVRVFIGHRSMILSLAMSPDGRYMASGDEDGT 556

Query: 448  IMMWDLSSGCCVTPLIGHSSCVWTLAFSCEGSLLASGSADCTVKFWDVATGTKVPRNEEK 269
            IMMWDLSSGCCVTPL+GH+SCVW+LAFSCEGSLLASGSADCTVKFWDV TG KVPRNEEK
Sbjct: 557  IMMWDLSSGCCVTPLVGHTSCVWSLAFSCEGSLLASGSADCTVKFWDVTTGIKVPRNEEK 616

Query: 268  SGNTNRLRSLKSLPTKSTPVYSLHFSRRNILFAAGAPAKGG 146
            SGNTNRLRSLKSLPTKS  VYSL F RRN+LFAAGA AK G
Sbjct: 617  SGNTNRLRSLKSLPTKSASVYSLQFCRRNLLFAAGAIAKTG 657


>ref|XP_003631761.1| PREDICTED: transcription initiation factor TFIID subunit 5-like
            isoform 2 [Vitis vinifera] gi|296082065|emb|CBI21070.3|
            unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  417 bits (1072), Expect = e-114
 Identities = 200/222 (90%), Positives = 209/222 (94%), Gaps = 1/222 (0%)
 Frame = -3

Query: 808  KLNANLVCYKGHNYPVWDVQFSPAGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDC 629
            KLNANLVCYKGHNYPVWDVQFSP GHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDC
Sbjct: 455  KLNANLVCYKGHNYPVWDVQFSPMGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDC 514

Query: 628  VQWHPNCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGT 449
            VQWH NCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSM+LSLAMSPDG+YMASGDEDGT
Sbjct: 515  VQWHINCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMVLSLAMSPDGQYMASGDEDGT 574

Query: 448  IMMWDLSSGCCVTPLIGHSSCVWTLAFSCEGSLLASGSADCTVKFWDVATGTKVPRNEE- 272
            IMMWDLSSG CV PL+GH SCVW+LAFSCEGSLLASGSAD TVK WDV T TKVPR+EE 
Sbjct: 575  IMMWDLSSGRCVMPLMGHMSCVWSLAFSCEGSLLASGSADSTVKLWDVTTSTKVPRSEEN 634

Query: 271  KSGNTNRLRSLKSLPTKSTPVYSLHFSRRNILFAAGAPAKGG 146
            KSGNT+RLRSLK+LPTKSTPVYSL FSRRN+LFAAGA +K G
Sbjct: 635  KSGNTSRLRSLKTLPTKSTPVYSLRFSRRNLLFAAGALSKSG 676



 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 36/122 (29%), Positives = 60/122 (49%)
 Frame = -3

Query: 661 IMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMILSLAMSPDG 482
           +  GH   V    + P  ++I + S+D T+RLW  +    +  + GH   +  +  SP G
Sbjct: 420 LFQGHSGPVYSATFSPLGDFILSSSADSTIRLWSTKLNANLVCYKGHNYPVWDVQFSPMG 479

Query: 481 RYMASGDEDGTIMMWDLSSGCCVTPLIGHSSCVWTLAFSCEGSLLASGSADCTVKFWDVA 302
            Y AS   D T  +W +     +  + GH S V  + +    + +A+GS+D TV+ WDV 
Sbjct: 480 HYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHINCNYIATGSSDKTVRLWDVQ 539

Query: 301 TG 296
           +G
Sbjct: 540 SG 541


>ref|XP_003526182.1| PREDICTED: transcription initiation factor TFIID subunit 5-like
            [Glycine max]
          Length = 663

 Score =  415 bits (1067), Expect = e-114
 Identities = 195/221 (88%), Positives = 206/221 (93%)
 Frame = -3

Query: 808  KLNANLVCYKGHNYPVWDVQFSPAGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDC 629
            KLNANLVCYKGHNYPVWDVQFSP GHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDC
Sbjct: 443  KLNANLVCYKGHNYPVWDVQFSPVGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDC 502

Query: 628  VQWHPNCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGT 449
            VQWH NCNYIATGSSDKTVRLWDVQSGECVR+F+GHR MILSLAMSPDGRYMASGDEDGT
Sbjct: 503  VQWHANCNYIATGSSDKTVRLWDVQSGECVRVFVGHRGMILSLAMSPDGRYMASGDEDGT 562

Query: 448  IMMWDLSSGCCVTPLIGHSSCVWTLAFSCEGSLLASGSADCTVKFWDVATGTKVPRNEEK 269
            IMMWDLSSG C+TPLIGH+SCVW+LAFS EGS++ASGSADCTVK WDV T TKV R EEK
Sbjct: 563  IMMWDLSSGRCLTPLIGHTSCVWSLAFSSEGSVIASGSADCTVKLWDVNTSTKVSRAEEK 622

Query: 268  SGNTNRLRSLKSLPTKSTPVYSLHFSRRNILFAAGAPAKGG 146
             G+ NRLRSLK+LPTKSTPVYSL FSRRN+LFAAGA +K G
Sbjct: 623  GGSANRLRSLKTLPTKSTPVYSLRFSRRNLLFAAGALSKSG 663



 Score = 69.7 bits (169), Expect = 7e-10
 Identities = 36/122 (29%), Positives = 60/122 (49%)
 Frame = -3

Query: 661 IMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMILSLAMSPDG 482
           +  GH   V    + P  ++I + S+D T+RLW  +    +  + GH   +  +  SP G
Sbjct: 408 LFQGHSGPVYAASFSPVGDFILSSSADSTIRLWSTKLNANLVCYKGHNYPVWDVQFSPVG 467

Query: 481 RYMASGDEDGTIMMWDLSSGCCVTPLIGHSSCVWTLAFSCEGSLLASGSADCTVKFWDVA 302
            Y AS   D T  +W +     +  + GH S V  + +    + +A+GS+D TV+ WDV 
Sbjct: 468 HYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHANCNYIATGSSDKTVRLWDVQ 527

Query: 301 TG 296
           +G
Sbjct: 528 SG 529


>ref|XP_002285276.2| PREDICTED: transcription initiation factor TFIID subunit 5-like
            isoform 1 [Vitis vinifera]
          Length = 667

 Score =  414 bits (1064), Expect = e-113
 Identities = 198/221 (89%), Positives = 208/221 (94%)
 Frame = -3

Query: 808  KLNANLVCYKGHNYPVWDVQFSPAGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDC 629
            KLNANLVCYKGHNYPVWDVQFSP GHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDC
Sbjct: 448  KLNANLVCYKGHNYPVWDVQFSPMGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDC 507

Query: 628  VQWHPNCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGT 449
            VQWH NCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSM+LSLAMSPDG+YMASGDEDGT
Sbjct: 508  VQWHINCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMVLSLAMSPDGQYMASGDEDGT 567

Query: 448  IMMWDLSSGCCVTPLIGHSSCVWTLAFSCEGSLLASGSADCTVKFWDVATGTKVPRNEEK 269
            IMMWDLSSG CV PL+GH SCVW+LAFSCEGSLLASGSAD TVK WDV T TKVPR+EE 
Sbjct: 568  IMMWDLSSGRCVMPLMGHMSCVWSLAFSCEGSLLASGSADSTVKLWDVTTSTKVPRSEE- 626

Query: 268  SGNTNRLRSLKSLPTKSTPVYSLHFSRRNILFAAGAPAKGG 146
            +GNT+RLRSLK+LPTKSTPVYSL FSRRN+LFAAGA +K G
Sbjct: 627  NGNTSRLRSLKTLPTKSTPVYSLRFSRRNLLFAAGALSKSG 667



 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 36/122 (29%), Positives = 60/122 (49%)
 Frame = -3

Query: 661 IMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMILSLAMSPDG 482
           +  GH   V    + P  ++I + S+D T+RLW  +    +  + GH   +  +  SP G
Sbjct: 413 LFQGHSGPVYSATFSPLGDFILSSSADSTIRLWSTKLNANLVCYKGHNYPVWDVQFSPMG 472

Query: 481 RYMASGDEDGTIMMWDLSSGCCVTPLIGHSSCVWTLAFSCEGSLLASGSADCTVKFWDVA 302
            Y AS   D T  +W +     +  + GH S V  + +    + +A+GS+D TV+ WDV 
Sbjct: 473 HYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHINCNYIATGSSDKTVRLWDVQ 532

Query: 301 TG 296
           +G
Sbjct: 533 SG 534


>ref|XP_002324907.1| predicted protein [Populus trichocarpa] gi|222866341|gb|EEF03472.1|
            predicted protein [Populus trichocarpa]
          Length = 675

 Score =  414 bits (1064), Expect = e-113
 Identities = 197/220 (89%), Positives = 206/220 (93%), Gaps = 1/220 (0%)
 Frame = -3

Query: 808  KLNANLVCYKGHNYPVWDVQFSPAGHYFASSSHDRTARIWSMDRIQPLRIMAGHLSDVDC 629
            KLNANLVCYKGHNYPVWDVQFSP G YFAS+SHDRTARIWSMDRIQPLRIMAGHLSDVDC
Sbjct: 454  KLNANLVCYKGHNYPVWDVQFSPVGQYFASASHDRTARIWSMDRIQPLRIMAGHLSDVDC 513

Query: 628  VQWHPNCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGT 449
            +QWH NCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMILSLAMSPDGRYMAS DEDGT
Sbjct: 514  LQWHANCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMILSLAMSPDGRYMASADEDGT 573

Query: 448  IMMWDLSSGCCVTPLIGHSSCVWTLAFSCEGSLLASGSADCTVKFWDVATGTKVPRNEE- 272
            IMMWDLSSG C++PLIGH+SCVW+LAFSCEGSLLASGSADCTVK WDV T TK PR EE 
Sbjct: 574  IMMWDLSSGRCISPLIGHNSCVWSLAFSCEGSLLASGSADCTVKLWDVTTSTKAPRTEES 633

Query: 271  KSGNTNRLRSLKSLPTKSTPVYSLHFSRRNILFAAGAPAK 152
            KSGNTNRLR LK+LPTKSTPVY+L FSRRN+LFAAGA AK
Sbjct: 634  KSGNTNRLRLLKTLPTKSTPVYTLRFSRRNLLFAAGALAK 673



 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 38/122 (31%), Positives = 61/122 (50%)
 Frame = -3

Query: 661 IMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQSGECVRIFIGHRSMILSLAMSPDG 482
           +  GH   V    + P  ++I + S+D TVRLW  +    +  + GH   +  +  SP G
Sbjct: 419 LFQGHSGPVHSATFSPLGDFILSSSADTTVRLWSTKLNANLVCYKGHNYPVWDVQFSPVG 478

Query: 481 RYMASGDEDGTIMMWDLSSGCCVTPLIGHSSCVWTLAFSCEGSLLASGSADCTVKFWDVA 302
           +Y AS   D T  +W +     +  + GH S V  L +    + +A+GS+D TV+ WDV 
Sbjct: 479 QYFASASHDRTARIWSMDRIQPLRIMAGHLSDVDCLQWHANCNYIATGSSDKTVRLWDVQ 538

Query: 301 TG 296
           +G
Sbjct: 539 SG 540