BLASTX nr result

ID: Glycyrrhiza24_contig00002448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00002448
         (1195 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003603006.1| Uroporphyrinogen-III synthase [Medicago trun...   441   e-121
ref|XP_003523593.1| PREDICTED: uroporphyrinogen-III synthase, ch...   439   e-121
ref|XP_003528245.1| PREDICTED: uroporphyrinogen-III synthase, ch...   427   e-117
ref|XP_002327111.1| predicted protein [Populus trichocarpa] gi|2...   350   5e-94
ref|XP_002282338.2| PREDICTED: uroporphyrinogen-III synthase, ch...   346   8e-93

>ref|XP_003603006.1| Uroporphyrinogen-III synthase [Medicago truncatula]
           gi|355492054|gb|AES73257.1| Uroporphyrinogen-III
           synthase [Medicago truncatula]
          Length = 308

 Score =  441 bits (1134), Expect = e-121
 Identities = 231/309 (74%), Positives = 255/309 (82%), Gaps = 7/309 (2%)
 Frame = +1

Query: 64  MAQFSVSPLCCA-TPSRLPLHRQ--IFVVSQRNSA----AASATDPNXXXXXXXXXNLTP 222
           MAQF VSP C + +P  L LHRQ   F +SQ   A    +ASATD +         NLTP
Sbjct: 1   MAQFCVSPFCSSPSPPCLQLHRQHQFFFISQPKIAPPPPSASATD-STFTIASTSSNLTP 59

Query: 223 RVVVTRERGKNAKLIAALAKHEINCLELPLIEHMRGPDLDRLPCVLSDNAFDWIVITSPE 402
           +VVVTRERGKN+KLI ALAKHEINCLELPLIEH+RGPD D+LP +L+D AFDW++ITSPE
Sbjct: 60  KVVVTRERGKNSKLITALAKHEINCLELPLIEHLRGPDFDKLPTLLTDYAFDWVIITSPE 119

Query: 403 AGSVFLEAWRAAAMPHVRICVVGSGTAGIFKEALQSSNQSLDIAFAPSKATGKVLATELP 582
           AGSVFLEAWRAA MP VRI VVGSGTA IFK+AL SSNQSLD+AF+PSKATGKVLATELP
Sbjct: 120 AGSVFLEAWRAAGMPRVRIGVVGSGTASIFKDALLSSNQSLDVAFSPSKATGKVLATELP 179

Query: 583 KIGNKSTVLYPASAKASNEIEEGLSSRGFDVTRMNTYTTVPVQHVDQMILKQXXXXXXXX 762
           +IGNK+T+LYPASAKASNEIEEGLSSRGF+VTRMNTYTTVPVQHVDQMILKQ        
Sbjct: 180 RIGNKTTILYPASAKASNEIEEGLSSRGFEVTRMNTYTTVPVQHVDQMILKQALAAPVVT 239

Query: 763 XXXXXXIHAWKNLLSDSDWSNSVACIGETTAAMARRLGFRNVYYPTQPGLEGWVETILEA 942
                 I AWKNLLSDSDWSNSVACIGETTAAMA RLGF+NVY+PTQPGLEGWVE+ILEA
Sbjct: 240 VASPSAIRAWKNLLSDSDWSNSVACIGETTAAMAGRLGFKNVYHPTQPGLEGWVESILEA 299

Query: 943 LGSYDELLR 969
           LGSYD+L R
Sbjct: 300 LGSYDDLSR 308


>ref|XP_003523593.1| PREDICTED: uroporphyrinogen-III synthase, chloroplastic-like
           [Glycine max]
          Length = 300

 Score =  439 bits (1130), Expect = e-121
 Identities = 226/302 (74%), Positives = 248/302 (82%)
 Frame = +1

Query: 64  MAQFSVSPLCCATPSRLPLHRQIFVVSQRNSAAASATDPNXXXXXXXXXNLTPRVVVTRE 243
           M  FS+SPL CA PS LP  R+IF+   R +AA+SATD           N  P+VVVTRE
Sbjct: 1   MPHFSLSPLSCA-PSPLPPRRRIFLAPPR-TAASSATDAASSSTSSSASNFAPKVVVTRE 58

Query: 244 RGKNAKLIAALAKHEINCLELPLIEHMRGPDLDRLPCVLSDNAFDWIVITSPEAGSVFLE 423
           RGKNAKLIAALAKHEINCLELPLIEH++GPDL RLP VL DNAFDW+VITSPEAGSVFLE
Sbjct: 59  RGKNAKLIAALAKHEINCLELPLIEHIQGPDLGRLPSVLGDNAFDWVVITSPEAGSVFLE 118

Query: 424 AWRAAAMPHVRICVVGSGTAGIFKEALQSSNQSLDIAFAPSKATGKVLATELPKIGNKST 603
           AWR++ MPHV+I VVG+GTA IFKEALQSSN+S+DIAF PSKATGKVLATELPKIGNK T
Sbjct: 119 AWRSSGMPHVKIGVVGAGTASIFKEALQSSNRSIDIAFVPSKATGKVLATELPKIGNKCT 178

Query: 604 VLYPASAKASNEIEEGLSSRGFDVTRMNTYTTVPVQHVDQMILKQXXXXXXXXXXXXXXI 783
           VLYPASAKASNEIEEGLS+RGF+VTRMNTYTTVPVQHVD  +LK               I
Sbjct: 179 VLYPASAKASNEIEEGLSNRGFEVTRMNTYTTVPVQHVDHTVLKIALAAPVVTVASPSSI 238

Query: 784 HAWKNLLSDSDWSNSVACIGETTAAMARRLGFRNVYYPTQPGLEGWVETILEALGSYDEL 963
            AWKNLLSDS+W+NSVACIGETTA MAR LGF NVYYP QPG+EGWVE+ILEALGSYDEL
Sbjct: 239 RAWKNLLSDSEWNNSVACIGETTATMARSLGFTNVYYPAQPGIEGWVESILEALGSYDEL 298

Query: 964 LR 969
           LR
Sbjct: 299 LR 300


>ref|XP_003528245.1| PREDICTED: uroporphyrinogen-III synthase, chloroplastic-like
           [Glycine max]
          Length = 297

 Score =  427 bits (1099), Expect = e-117
 Identities = 223/297 (75%), Positives = 244/297 (82%), Gaps = 2/297 (0%)
 Frame = +1

Query: 64  MAQFSVSPLCCATPSRLPLHRQIFVVSQRNSAAASATD--PNXXXXXXXXXNLTPRVVVT 237
           MA FS+SPL CA PS LP  R+IF+   R +AA+SATD             N  P+VVVT
Sbjct: 1   MAHFSLSPLSCA-PSPLPPRRRIFLSPPR-AAASSATDVVSTSTSTSSSASNFAPKVVVT 58

Query: 238 RERGKNAKLIAALAKHEINCLELPLIEHMRGPDLDRLPCVLSDNAFDWIVITSPEAGSVF 417
           RERGKNAKLIAALAKHEINCLELPLIEHM+GPDLDRLP VL DNAFDW+VITSPEAGSVF
Sbjct: 59  RERGKNAKLIAALAKHEINCLELPLIEHMQGPDLDRLPSVLGDNAFDWVVITSPEAGSVF 118

Query: 418 LEAWRAAAMPHVRICVVGSGTAGIFKEALQSSNQSLDIAFAPSKATGKVLATELPKIGNK 597
           LEAWRA+ MPHV+I VVG+GTA IFKEALQSSN+SLDIAF PSKATGKVLATELPKIG+K
Sbjct: 119 LEAWRASGMPHVKIGVVGAGTASIFKEALQSSNRSLDIAFVPSKATGKVLATELPKIGSK 178

Query: 598 STVLYPASAKASNEIEEGLSSRGFDVTRMNTYTTVPVQHVDQMILKQXXXXXXXXXXXXX 777
            TVLYPASAKASNEIEEGLS+RGF+VTRMNTYTTVPVQHVD  +LK              
Sbjct: 179 CTVLYPASAKASNEIEEGLSNRGFEVTRMNTYTTVPVQHVDHTVLKIALAAPVVTVASPS 238

Query: 778 XIHAWKNLLSDSDWSNSVACIGETTAAMARRLGFRNVYYPTQPGLEGWVETILEALG 948
            I AWKNLLSDS+W+NSVACIGETTA MAR LGF NVY+PTQPG+EGWVE+ILEALG
Sbjct: 239 SIRAWKNLLSDSEWNNSVACIGETTATMARSLGFTNVYFPTQPGIEGWVESILEALG 295


>ref|XP_002327111.1| predicted protein [Populus trichocarpa] gi|222835426|gb|EEE73861.1|
           predicted protein [Populus trichocarpa]
          Length = 296

 Score =  350 bits (897), Expect = 5e-94
 Identities = 180/302 (59%), Positives = 230/302 (76%), Gaps = 3/302 (0%)
 Frame = +1

Query: 64  MAQFSVSPLCCATPSRLPLHRQIFVVSQRNSAAASATDPNXXXXXXXXXNLTPRVVVTRE 243
           ++ FS++P   ++ S L LHR+ F  S R SA+AS+T            N  P+VVVTRE
Sbjct: 5   VSPFSLAPSLSSSSSCLQLHRRFFSPSLRTSASASSTS-----------NSAPKVVVTRE 53

Query: 244 RGKNAKLIAALAKHEINCLELPLIEHMRGPDLDRLPCVL-SDNAFDWIVITSPEAGSVFL 420
           RGKN KLI ALAK+ I+CLELPLI+H +GPD D+L  VL +D+AFDWI++TSPEAGSVFL
Sbjct: 54  RGKNGKLIKALAKYGISCLELPLIQHTQGPDSDKLSSVLCADSAFDWIIVTSPEAGSVFL 113

Query: 421 EAWRAAAMPHVRICVVGSGTAGIFKEALQSSNQSLDIAFAPSKATGKVLATELPKIGNK- 597
           EAW+ A  P V++ VVG+GTA IF+E +QSS +SLD+AF PSKATGKVLA+ELP+ GNK 
Sbjct: 114 EAWKVAGTPKVKLGVVGAGTASIFEEVMQSSERSLDVAFTPSKATGKVLASELPRNGNKR 173

Query: 598 STVLYPASAKASNEIEEGLSSRGFDVTRMNTYTTVPVQHVDQMILKQXXXXXXXXXXXXX 777
            TVLYPASAKASNEIE+GL +RGF+V R+NTYTTVPV HVD+M+LKQ             
Sbjct: 174 CTVLYPASAKASNEIEQGLYNRGFEVVRLNTYTTVPVGHVDEMVLKQAISAPVVAVASPS 233

Query: 778 XIHAWKNLLSDS-DWSNSVACIGETTAAMARRLGFRNVYYPTQPGLEGWVETILEALGSY 954
            + AW NL+ +S +W+NSVACIGETT + A+RLGF+ VY+P QPGLEGWV++ILEAL ++
Sbjct: 234 SVRAWANLIPESEEWNNSVACIGETTGSAAKRLGFKKVYFPRQPGLEGWVDSILEALRAH 293

Query: 955 DE 960
           ++
Sbjct: 294 ND 295


>ref|XP_002282338.2| PREDICTED: uroporphyrinogen-III synthase, chloroplastic-like [Vitis
           vinifera] gi|302142364|emb|CBI19567.3| unnamed protein
           product [Vitis vinifera]
          Length = 304

 Score =  346 bits (887), Expect = 8e-93
 Identities = 184/303 (60%), Positives = 220/303 (72%), Gaps = 2/303 (0%)
 Frame = +1

Query: 55  HVSMAQFSVSPLCCATPSRLPLHRQIFVVSQRNSAAASATDPNXXXXXXXXXNLTPRVVV 234
           H+S++  S  P   ++P  L LH +IF    R   ++S+T             L P+VVV
Sbjct: 3   HLSLSSLSPPPSSSSSPP-LRLHGRIFSPFCRVQVSSSSTS-----------YLQPKVVV 50

Query: 235 TRERGKNAKLIAALAKHEINCLELPLIEHMRGPDLDRLPCVLSDNAFDWIVITSPEAGSV 414
           TRE GKN KLI  LA+H INCLE PLI+H +GPDLDRL  VLSD AFDWI+ITSPEAG V
Sbjct: 51  TREHGKNGKLINVLAEHGINCLEFPLIQHTKGPDLDRLSSVLSDTAFDWIIITSPEAGLV 110

Query: 415 FLEAWRAAAMPHVRICVVGSGTAGIFKEALQSSNQSLDIAFAPSKATGKVLATELPKIGN 594
           FLEAW+AA  P V++ VVGSGT  +F+E +QSS QSL +AFAPSKATGKVLA+ELPK GN
Sbjct: 111 FLEAWKAAGAPCVKVGVVGSGTQSVFEEVMQSSKQSLRVAFAPSKATGKVLASELPKDGN 170

Query: 595 KS-TVLYPASAKASNEIEEGLSSRGFDVTRMNTYTTVPVQHVDQMILKQXXXXXXXXXXX 771
           ++ TVLYPASAKAS EIEEGLSSRGF+VTR+NTYTTVPV  VD+M+ KQ           
Sbjct: 171 RTCTVLYPASAKASGEIEEGLSSRGFEVTRLNTYTTVPVNDVDEMVFKQALSAPVVAVAS 230

Query: 772 XXXIHAWKNLLSDSD-WSNSVACIGETTAAMARRLGFRNVYYPTQPGLEGWVETILEALG 948
              + AW NLLS+S+ W N+VACIGETTA  A+R G RNVYYPT PGLEGWV++ILEAL 
Sbjct: 231 PSAVRAWVNLLSESERWGNAVACIGETTALAAKRSGLRNVYYPTNPGLEGWVDSILEALR 290

Query: 949 SYD 957
            +D
Sbjct: 291 VHD 293


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