BLASTX nr result

ID: Glycyrrhiza24_contig00002446 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00002446
         (647 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK46812.1| unknown [Medicago truncatula]                          102   6e-20
ref|NP_001235337.1| uncharacterized protein LOC100527385 [Glycin...   100   2e-19
ref|XP_003531332.1| PREDICTED: 60S acidic ribosomal protein P3-l...    98   2e-18
ref|XP_004148320.1| PREDICTED: 60S acidic ribosomal protein P3-2...    97   2e-18
emb|CAN65458.1| hypothetical protein VITISV_010073 [Vitis vinifera]    97   3e-18

>gb|AFK46812.1| unknown [Medicago truncatula]
          Length = 119

 Score =  102 bits (254), Expect = 6e-20
 Identities = 51/66 (77%), Positives = 58/66 (87%)
 Frame = +2

Query: 47  MGVFTFVLRKSGADWTAKQFSGDIEESSPSTYEIQRKLVKAALDADSSGAVQSSYSLISP 226
           MGVFTFVL K+GA+WTAKQ+SGDIE S+ ST+EIQRKLV+AAL  DS+G VQSSYS ISP
Sbjct: 1   MGVFTFVLNKTGAEWTAKQYSGDIEASAESTFEIQRKLVQAALAVDSNGGVQSSYSPISP 60

Query: 227 SSAVFQ 244
           SS VFQ
Sbjct: 61  SSGVFQ 66


>ref|NP_001235337.1| uncharacterized protein LOC100527385 [Glycine max]
           gi|255632230|gb|ACU16473.1| unknown [Glycine max]
          Length = 125

 Score =  100 bits (249), Expect = 2e-19
 Identities = 49/66 (74%), Positives = 59/66 (89%)
 Frame = +2

Query: 47  MGVFTFVLRKSGADWTAKQFSGDIEESSPSTYEIQRKLVKAALDADSSGAVQSSYSLISP 226
           MGVFTFV+RKSGA+W+AKQ SGDIE S+ STY++QRKLV+AAL  DSSG VQSS+S +SP
Sbjct: 1   MGVFTFVVRKSGAEWSAKQHSGDIEASADSTYDLQRKLVQAALAVDSSGGVQSSFSPVSP 60

Query: 227 SSAVFQ 244
           +SAVFQ
Sbjct: 61  TSAVFQ 66


>ref|XP_003531332.1| PREDICTED: 60S acidic ribosomal protein P3-like [Glycine max]
          Length = 120

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 47/66 (71%), Positives = 59/66 (89%)
 Frame = +2

Query: 47  MGVFTFVLRKSGADWTAKQFSGDIEESSPSTYEIQRKLVKAALDADSSGAVQSSYSLISP 226
           MGVFTFV+RKSG++W+AKQ SGDIE S+ ST+++QRKLV+AAL  DSSG VQSS+S +SP
Sbjct: 1   MGVFTFVVRKSGSEWSAKQHSGDIEASADSTFDLQRKLVQAALAVDSSGGVQSSFSPVSP 60

Query: 227 SSAVFQ 244
           +SAVFQ
Sbjct: 61  TSAVFQ 66


>ref|XP_004148320.1| PREDICTED: 60S acidic ribosomal protein P3-2-like isoform 1
           [Cucumis sativus] gi|449461183|ref|XP_004148321.1|
           PREDICTED: 60S acidic ribosomal protein P3-2-like
           isoform 2 [Cucumis sativus]
           gi|449507401|ref|XP_004163021.1| PREDICTED: 60S acidic
           ribosomal protein P3-2-like isoform 1 [Cucumis sativus]
           gi|449507403|ref|XP_004163022.1| PREDICTED: 60S acidic
           ribosomal protein P3-2-like isoform 2 [Cucumis sativus]
           gi|449507406|ref|XP_004163023.1| PREDICTED: 60S acidic
           ribosomal protein P3-2-like isoform 3 [Cucumis sativus]
           gi|449507410|ref|XP_004163024.1| PREDICTED: 60S acidic
           ribosomal protein P3-2-like isoform 4 [Cucumis sativus]
          Length = 121

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 47/66 (71%), Positives = 55/66 (83%)
 Frame = +2

Query: 47  MGVFTFVLRKSGADWTAKQFSGDIEESSPSTYEIQRKLVKAALDADSSGAVQSSYSLISP 226
           MGVFTFV R SG  WTA Q+SGD+E S+ STYE+QRKLV++AL  DSSG VQSS+S I+P
Sbjct: 1   MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITP 60

Query: 227 SSAVFQ 244
           SSAVFQ
Sbjct: 61  SSAVFQ 66


>emb|CAN65458.1| hypothetical protein VITISV_010073 [Vitis vinifera]
          Length = 121

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 45/66 (68%), Positives = 56/66 (84%)
 Frame = +2

Query: 47  MGVFTFVLRKSGADWTAKQFSGDIEESSPSTYEIQRKLVKAALDADSSGAVQSSYSLISP 226
           MGVFTFV R SG +WTAKQ +GD+EES+ STY++QRK V++AL ADSSG VQSS+S ++P
Sbjct: 1   MGVFTFVCRSSGKEWTAKQMNGDLEESAASTYDLQRKCVQSALSADSSGGVQSSFSYVTP 60

Query: 227 SSAVFQ 244
           SS VFQ
Sbjct: 61  SSGVFQ 66


Top