BLASTX nr result

ID: Glycyrrhiza24_contig00002409 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00002409
         (1134 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241930.1| uncharacterized protein LOC100787981 [Glycin...   409   e-112
ref|XP_003519525.1| PREDICTED: uncharacterized protein LOC100500...   405   e-111
gb|AFK34561.1| unknown [Lotus japonicus]                              395   e-108
ref|XP_003617323.1| Reticulon-like protein B8 [Medicago truncatu...   367   2e-99
ref|XP_003617324.1| Reticulon-like protein B8 [Medicago truncatu...   366   5e-99

>ref|NP_001241930.1| uncharacterized protein LOC100787981 [Glycine max]
           gi|255638847|gb|ACU19727.1| unknown [Glycine max]
          Length = 245

 Score =  409 bits (1050), Expect = e-112
 Identities = 200/232 (86%), Positives = 214/232 (92%)
 Frame = +2

Query: 116 MSEKITAEKLLNTLVETLGEKQKSVSFFEEEKSTSVSSQFNRLFGRQKPVHHILGGGKSA 295
           MSEKITAEKLLNTLVETL EKQKS  FFEE+KS+SVSSQFNRLFGRQKPVHHILGGGKSA
Sbjct: 1   MSEKITAEKLLNTLVETLTEKQKSGLFFEEDKSSSVSSQFNRLFGRQKPVHHILGGGKSA 60

Query: 296 DVLLWRNKKISASVLTAATAIWVLFEWLNYNFLTLLFYALVLGMLVQFLWINASSLFSRK 475
           DVLLWRNKKISASVL+AATAIWVLFEWLNYNFLT+LF+ + LGML QFLW NAS LFSRK
Sbjct: 61  DVLLWRNKKISASVLSAATAIWVLFEWLNYNFLTILFFVVALGMLGQFLWTNASGLFSRK 120

Query: 476 PSKVPRFVLPEDFFVNIATAVGAEVNMGLRFLQDVACGGNLKKFLLVVMGLWTGAVVGSW 655
           PSKVPRFV P+  FVNIATAVGAEVN GLRFLQDV+CGGNLK+FL+V++ LW GAV+GSW
Sbjct: 121 PSKVPRFVFPDGIFVNIATAVGAEVNRGLRFLQDVSCGGNLKQFLIVIVSLWAGAVIGSW 180

Query: 656 CNFLTVMYIGFVAAHTLPVLYERYEDQVDNFVYKVLGQVQNQYQKLDAGLLS 811
           CNFLTVMYIGFVAAHTLPVLYERYEDQVDNFVYKV  Q+QN YQKLD GLLS
Sbjct: 181 CNFLTVMYIGFVAAHTLPVLYERYEDQVDNFVYKVFDQLQNHYQKLDTGLLS 232


>ref|XP_003519525.1| PREDICTED: uncharacterized protein LOC100500122 [Glycine max]
          Length = 245

 Score =  405 bits (1042), Expect = e-111
 Identities = 198/232 (85%), Positives = 213/232 (91%)
 Frame = +2

Query: 116 MSEKITAEKLLNTLVETLGEKQKSVSFFEEEKSTSVSSQFNRLFGRQKPVHHILGGGKSA 295
           MSEKITAE LLNTLVETL EKQKS SFFEE+KS+SVS QFNRLFGRQKPVHHILGGGKSA
Sbjct: 1   MSEKITAENLLNTLVETLTEKQKSGSFFEEDKSSSVSYQFNRLFGRQKPVHHILGGGKSA 60

Query: 296 DVLLWRNKKISASVLTAATAIWVLFEWLNYNFLTLLFYALVLGMLVQFLWINASSLFSRK 475
           DVLLWRNKKISASVL+AATAIWVLFEWLNYNF+T+LF+ + LGML QFLW N S LFSRK
Sbjct: 61  DVLLWRNKKISASVLSAATAIWVLFEWLNYNFITILFFVVALGMLGQFLWTNVSGLFSRK 120

Query: 476 PSKVPRFVLPEDFFVNIATAVGAEVNMGLRFLQDVACGGNLKKFLLVVMGLWTGAVVGSW 655
           PSKVPRFVLP+D FVNIAT VGAEVN GLRFLQDV+CGG+LK+FL+VV+ LW GAV+GSW
Sbjct: 121 PSKVPRFVLPDDIFVNIATVVGAEVNRGLRFLQDVSCGGSLKQFLIVVVSLWAGAVIGSW 180

Query: 656 CNFLTVMYIGFVAAHTLPVLYERYEDQVDNFVYKVLGQVQNQYQKLDAGLLS 811
           CNFLTVMYIGFVAAHTLPVLYERYEDQVDNFVYKV  Q+QN YQKLD GLLS
Sbjct: 181 CNFLTVMYIGFVAAHTLPVLYERYEDQVDNFVYKVFDQMQNHYQKLDTGLLS 232


>gb|AFK34561.1| unknown [Lotus japonicus]
          Length = 247

 Score =  395 bits (1016), Expect = e-108
 Identities = 195/234 (83%), Positives = 210/234 (89%), Gaps = 2/234 (0%)
 Frame = +2

Query: 116 MSEKITAEKLLNTLVETLG--EKQKSVSFFEEEKSTSVSSQFNRLFGRQKPVHHILGGGK 289
           MS+KITAE LLNTLVET+   E +KSVSFFEEEK  SVSSQFNRLFGRQKPVHH+LGGGK
Sbjct: 1   MSDKITAENLLNTLVETISHAEHKKSVSFFEEEKPNSVSSQFNRLFGRQKPVHHLLGGGK 60

Query: 290 SADVLLWRNKKISASVLTAATAIWVLFEWLNYNFLTLLFYALVLGMLVQFLWINASSLFS 469
           SADVLLWRNKKISA VLT ATAIWV+FEWLNYNFLTLLF+AL LGML QFLW NAS +F 
Sbjct: 61  SADVLLWRNKKISAGVLTGATAIWVVFEWLNYNFLTLLFFALALGMLAQFLWANASGVFG 120

Query: 470 RKPSKVPRFVLPEDFFVNIATAVGAEVNMGLRFLQDVACGGNLKKFLLVVMGLWTGAVVG 649
           RK SKVPRFVLPEDF VNIATAVG EVN GLR LQD +CGGNLK+FLLVV+ LW GAV+G
Sbjct: 121 RKSSKVPRFVLPEDFIVNIATAVGFEVNRGLRVLQDASCGGNLKQFLLVVVSLWAGAVIG 180

Query: 650 SWCNFLTVMYIGFVAAHTLPVLYERYEDQVDNFVYKVLGQVQNQYQKLDAGLLS 811
           SWCNFLTVMYIGFVAAHT PVLYERYEDQVD+FVYK LGQ++NQYQKLD+GLLS
Sbjct: 181 SWCNFLTVMYIGFVAAHTFPVLYERYEDQVDDFVYKFLGQMRNQYQKLDSGLLS 234


>ref|XP_003617323.1| Reticulon-like protein B8 [Medicago truncatula]
           gi|355518658|gb|AET00282.1| Reticulon-like protein B8
           [Medicago truncatula]
          Length = 290

 Score =  367 bits (943), Expect = 2e-99
 Identities = 184/237 (77%), Positives = 211/237 (89%), Gaps = 2/237 (0%)
 Frame = +2

Query: 107 TGTMSEKITAEKLLNTLVETLGEKQKSVSFFEEEKSTSVSSQFNRLFGRQKPVHHILGGG 286
           T TMSE  TAEKLLNTLVETL EKQKS SF  E K+ S++SQFN+LFGR+KPVHHILGGG
Sbjct: 46  TETMSENFTAEKLLNTLVETL-EKQKSGSFHVEVKANSMTSQFNKLFGREKPVHHILGGG 104

Query: 287 KSADVLLWRNKKISASVLTAATAIWVLFEWLNYNFLTLLFYALVLGMLVQFLWINASSLF 466
           KSADVLLWR+KKISA+VLTAAT IW+LFEWLNYNFL+LL  ALVL M VQFLW NAS +F
Sbjct: 105 KSADVLLWRDKKISAAVLTAATTIWLLFEWLNYNFLSLLCLALVLVMSVQFLWTNASGVF 164

Query: 467 S--RKPSKVPRFVLPEDFFVNIATAVGAEVNMGLRFLQDVACGGNLKKFLLVVMGLWTGA 640
           S  RKPSK PR VLP+DFFVNIATAVGAEVN GLRFLQ+V+CGGNLK+F++VV+ LW GA
Sbjct: 165 SSDRKPSKAPRLVLPKDFFVNIATAVGAEVNRGLRFLQNVSCGGNLKQFVIVVVCLWAGA 224

Query: 641 VVGSWCNFLTVMYIGFVAAHTLPVLYERYEDQVDNFVYKVLGQVQNQYQKLDAGLLS 811
           V+G+W NF TV+YIGFVAAHTLPVLYE+Y+DQ+DNFVYKVL Q+QNQY+K+D+GLLS
Sbjct: 225 VIGNWFNFFTVVYIGFVAAHTLPVLYEKYDDQIDNFVYKVLDQMQNQYRKVDSGLLS 281


>ref|XP_003617324.1| Reticulon-like protein B8 [Medicago truncatula]
           gi|355518659|gb|AET00283.1| Reticulon-like protein B8
           [Medicago truncatula]
          Length = 287

 Score =  366 bits (940), Expect = 5e-99
 Identities = 183/235 (77%), Positives = 210/235 (89%), Gaps = 2/235 (0%)
 Frame = +2

Query: 113 TMSEKITAEKLLNTLVETLGEKQKSVSFFEEEKSTSVSSQFNRLFGRQKPVHHILGGGKS 292
           TMSE  TAEKLLNTLVETL EKQKS SF  E K+ S++SQFN+LFGR+KPVHHILGGGKS
Sbjct: 45  TMSENFTAEKLLNTLVETL-EKQKSGSFHVEVKANSMTSQFNKLFGREKPVHHILGGGKS 103

Query: 293 ADVLLWRNKKISASVLTAATAIWVLFEWLNYNFLTLLFYALVLGMLVQFLWINASSLFS- 469
           ADVLLWR+KKISA+VLTAAT IW+LFEWLNYNFL+LL  ALVL M VQFLW NAS +FS 
Sbjct: 104 ADVLLWRDKKISAAVLTAATTIWLLFEWLNYNFLSLLCLALVLVMSVQFLWTNASGVFSS 163

Query: 470 -RKPSKVPRFVLPEDFFVNIATAVGAEVNMGLRFLQDVACGGNLKKFLLVVMGLWTGAVV 646
            RKPSK PR VLP+DFFVNIATAVGAEVN GLRFLQ+V+CGGNLK+F++VV+ LW GAV+
Sbjct: 164 DRKPSKAPRLVLPKDFFVNIATAVGAEVNRGLRFLQNVSCGGNLKQFVIVVVCLWAGAVI 223

Query: 647 GSWCNFLTVMYIGFVAAHTLPVLYERYEDQVDNFVYKVLGQVQNQYQKLDAGLLS 811
           G+W NF TV+YIGFVAAHTLPVLYE+Y+DQ+DNFVYKVL Q+QNQY+K+D+GLLS
Sbjct: 224 GNWFNFFTVVYIGFVAAHTLPVLYEKYDDQIDNFVYKVLDQMQNQYRKVDSGLLS 278


Top