BLASTX nr result

ID: Glycyrrhiza24_contig00002247 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00002247
         (2001 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534095.1| PREDICTED: eukaryotic peptide chain release ...   791   0.0  
ref|XP_003608854.1| Eukaryotic peptide chain release factor subu...   768   0.0  
ref|XP_003548305.1| PREDICTED: eukaryotic peptide chain release ...   781   0.0  
ref|XP_004140563.1| PREDICTED: eukaryotic peptide chain release ...   778   0.0  
ref|XP_002271656.1| PREDICTED: eukaryotic peptide chain release ...   778   0.0  

>ref|XP_003534095.1| PREDICTED: eukaryotic peptide chain release factor subunit 1-3-like
            [Glycine max]
          Length = 437

 Score =  791 bits (2042), Expect = 0.0
 Identities = 397/423 (93%), Positives = 405/423 (95%)
 Frame = -3

Query: 1864 MADAHETDKNIEVWXXXXXXXXXXXARGNGTSMISLIMPPRDQIARVTKMLGDEFGTASN 1685
            M D HETDKNIEVW           ARGNGTSMISLIMPPRDQI+RVTKMLGDEFGTASN
Sbjct: 1    MVDGHETDKNIEVWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN 60

Query: 1684 IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN 1505
            IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVT+DGKEKKVTIDFEPFRPIN
Sbjct: 61   IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPIN 120

Query: 1504 ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG 1325
            ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG
Sbjct: 121  ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG 180

Query: 1324 RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQS 1145
            RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQS
Sbjct: 181  RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQS 240

Query: 1144 DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKKLIGKYFEEISQDTG 965
            DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEK+LIGKYFEEISQDTG
Sbjct: 241  DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTG 300

Query: 964  KYVFGVDDTLKALEMGAVETLIVWENLDMTRYALKNSTTGEVVIKHLNKEQEADQSNFRD 785
            KYVFGVDDTLKALEMGAVETLIVWENLDM RY LKNS TGEVVIKHLNKEQ+ADQSNFRD
Sbjct: 301  KYVFGVDDTLKALEMGAVETLIVWENLDMNRYVLKNSATGEVVIKHLNKEQDADQSNFRD 360

Query: 784  PGSSADYEVLEKMSLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM 605
            P S+AD+EV EK+SLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM
Sbjct: 361  PESNADFEVQEKLSLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM 420

Query: 604  RTF 596
            R+F
Sbjct: 421  RSF 423


>ref|XP_003608854.1| Eukaryotic peptide chain release factor subunit 1-1 [Medicago
            truncatula] gi|355509909|gb|AES91051.1| Eukaryotic
            peptide chain release factor subunit 1-1 [Medicago
            truncatula]
          Length = 549

 Score =  768 bits (1984), Expect(2) = 0.0
 Identities = 397/525 (75%), Positives = 435/525 (82%)
 Frame = -3

Query: 1864 MADAHETDKNIEVWXXXXXXXXXXXARGNGTSMISLIMPPRDQIARVTKMLGDEFGTASN 1685
            MADAH+TDKNI VW           ARGNGTSMISLI+PPRDQI+RVTKML +E+GTASN
Sbjct: 1    MADAHDTDKNIGVWKIKQLMKNLEAARGNGTSMISLIIPPRDQISRVTKMLANEYGTASN 60

Query: 1684 IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN 1505
            IKSRVNRQSVLGAI+SAQQRLKLYNKVPPNGLVLY GTI+T+D KEKK T DFEPFRPIN
Sbjct: 61   IKSRVNRQSVLGAISSAQQRLKLYNKVPPNGLVLYCGTILTDDEKEKKETFDFEPFRPIN 120

Query: 1504 ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG 1325
            ASLYLCDNKFHTE LNE+LESDDK+GFIVMDGNGTLFGTLSGNTREVLHK++VDLPKKHG
Sbjct: 121  ASLYLCDNKFHTEPLNEILESDDKYGFIVMDGNGTLFGTLSGNTREVLHKYTVDLPKKHG 180

Query: 1324 RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQS 1145
            RGGQSALRFARLR EKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELS+S
Sbjct: 181  RGGQSALRFARLRTEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSKS 240

Query: 1144 DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKKLIGKYFEEISQDTG 965
            DMFDPRLQAK+LNVVDVSYGGE GFNQAI+ S+EILSNVKFIQEK+LI KYFEEI QDTG
Sbjct: 241  DMFDPRLQAKLLNVVDVSYGGEMGFNQAIQQSSEILSNVKFIQEKRLIEKYFEEIGQDTG 300

Query: 964  KYVFGVDDTLKALEMGAVETLIVWENLDMTRYALKNSTTGEVVIKHLNKEQEADQSNFRD 785
            K V+GVDDTL+AL+ GAVETLIVWENLDMTRY LKNSTTGE+VIKH NK+QEA+QSNFRD
Sbjct: 301  KSVYGVDDTLQALDAGAVETLIVWENLDMTRYVLKNSTTGEIVIKHFNKQQEANQSNFRD 360

Query: 784  PGSSADYEVLEKMSLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM 605
            P +S+DYEV E +SL+EWFANEYK+FGCTLE VTNKSQEGSQFC+GFGGIGG+LRYQLDM
Sbjct: 361  PENSSDYEVQEMLSLVEWFANEYKQFGCTLEIVTNKSQEGSQFCKGFGGIGGMLRYQLDM 420

Query: 604  RTFXXXXXXXXXXXXSE*QSMKSFPLLVQERKVKVPAPVWEXXXXXXXXXXXXXXXXXXX 425
            RTF                    F     ER+ K+PAPVWE                   
Sbjct: 421  RTF------------------DDFSDDGSEREAKIPAPVWE--VAARAAAAPPLPHMSVV 460

Query: 424  XPGKFDCESSCLALKVLSDRSDSLTCSHVFQYLALRISAILLATA 290
              GKFD + SC A KV S+RS  LTCS + +  AL+I+A LLATA
Sbjct: 461  LHGKFDSKMSCFAPKVPSNRSYYLTCSPIIRSSALQITATLLATA 505



 Score = 38.5 bits (88), Expect(2) = 0.0
 Identities = 20/35 (57%), Positives = 26/35 (74%)
 Frame = -2

Query: 221 VLSARTQKGKNEIMLPKEHYLAPMKSLLDLFVYVT 117
           ++SA  Q  KN+++LPKEH LA  KSLL+L V VT
Sbjct: 515 LISACIQNCKNKVILPKEHNLASTKSLLNLSVDVT 549


>ref|XP_003548305.1| PREDICTED: eukaryotic peptide chain release factor subunit 1-3-like
            [Glycine max]
          Length = 437

 Score =  781 bits (2016), Expect = 0.0
 Identities = 393/423 (92%), Positives = 403/423 (95%)
 Frame = -3

Query: 1864 MADAHETDKNIEVWXXXXXXXXXXXARGNGTSMISLIMPPRDQIARVTKMLGDEFGTASN 1685
            MADAH TDKNIEVW           ARGNGTSMISLIMPPRDQI+RVTKMLGDEFGTASN
Sbjct: 1    MADAHGTDKNIEVWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN 60

Query: 1684 IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN 1505
            IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVT+DGKEKKVTIDFEPFRPIN
Sbjct: 61   IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPIN 120

Query: 1504 ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG 1325
            ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG
Sbjct: 121  ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG 180

Query: 1324 RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQS 1145
            RGGQSALRFARLRMEKRHNYVRKTAE ATQFYIN ATSQPNVSGLILAGSADFKTELSQS
Sbjct: 181  RGGQSALRFARLRMEKRHNYVRKTAEHATQFYINAATSQPNVSGLILAGSADFKTELSQS 240

Query: 1144 DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKKLIGKYFEEISQDTG 965
            DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEK+LIGKYFEEISQDTG
Sbjct: 241  DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTG 300

Query: 964  KYVFGVDDTLKALEMGAVETLIVWENLDMTRYALKNSTTGEVVIKHLNKEQEADQSNFRD 785
            KYVFGVDDTLKALEMGAVETLIVWENLDM RY LKNS TGEVVIKH NKEQ+++QSNFRD
Sbjct: 301  KYVFGVDDTLKALEMGAVETLIVWENLDMNRYVLKNSATGEVVIKHFNKEQDSNQSNFRD 360

Query: 784  PGSSADYEVLEKMSLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM 605
            P S+AD+EV EK+SLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM
Sbjct: 361  PESNADFEVQEKLSLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM 420

Query: 604  RTF 596
            R+F
Sbjct: 421  RSF 423


>ref|XP_004140563.1| PREDICTED: eukaryotic peptide chain release factor subunit 1-3-like
            [Cucumis sativus] gi|449487371|ref|XP_004157593.1|
            PREDICTED: eukaryotic peptide chain release factor
            subunit 1-3-like [Cucumis sativus]
          Length = 436

 Score =  778 bits (2010), Expect = 0.0
 Identities = 387/423 (91%), Positives = 406/423 (95%)
 Frame = -3

Query: 1864 MADAHETDKNIEVWXXXXXXXXXXXARGNGTSMISLIMPPRDQIARVTKMLGDEFGTASN 1685
            MADAHETDKNIE+W           ARGNGTSMISLIMPPRDQI+RVTKMLGDEFGTASN
Sbjct: 1    MADAHETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN 60

Query: 1684 IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN 1505
            IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN
Sbjct: 61   IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN 120

Query: 1504 ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG 1325
            ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG
Sbjct: 121  ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG 180

Query: 1324 RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQS 1145
            RGGQSALRFARLRMEKRHNYVRKTAELATQF+INPATSQPNV+GLILAGSADFKTELSQS
Sbjct: 181  RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQS 240

Query: 1144 DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKKLIGKYFEEISQDTG 965
            DMFDPRLQAKILNVVDVSYGGENGFNQAIELS+EILSNVKFIQEK+LIGKYFEEISQDTG
Sbjct: 241  DMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTG 300

Query: 964  KYVFGVDDTLKALEMGAVETLIVWENLDMTRYALKNSTTGEVVIKHLNKEQEADQSNFRD 785
            KYVFGVDDTLKALEMGAVE LIVWENLD+ RY LKN++TGE++IKHLNKEQEA+QSNFRD
Sbjct: 301  KYVFGVDDTLKALEMGAVEILIVWENLDINRYVLKNASTGEIIIKHLNKEQEANQSNFRD 360

Query: 784  PGSSADYEVLEKMSLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM 605
            P +S++ EV EKM+LLEWFANEYK+FGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLD+
Sbjct: 361  PATSSELEVQEKMALLEWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDI 420

Query: 604  RTF 596
            R+F
Sbjct: 421  RSF 423


>ref|XP_002271656.1| PREDICTED: eukaryotic peptide chain release factor subunit 1-3 [Vitis
            vinifera]
          Length = 437

 Score =  778 bits (2009), Expect = 0.0
 Identities = 389/423 (91%), Positives = 405/423 (95%)
 Frame = -3

Query: 1864 MADAHETDKNIEVWXXXXXXXXXXXARGNGTSMISLIMPPRDQIARVTKMLGDEFGTASN 1685
            MAD HETDKNIE+W           ARGNGTSMISLIMPPRDQI+RVTKMLGDEFGTASN
Sbjct: 1    MADGHETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN 60

Query: 1684 IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN 1505
            IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN
Sbjct: 61   IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN 120

Query: 1504 ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG 1325
            ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKF+VDLPKKHG
Sbjct: 121  ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG 180

Query: 1324 RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQS 1145
            RGGQSALRFARLRMEKRHNYVRKTAELATQF+INPATSQPNVSGLILAGSADFKTELSQS
Sbjct: 181  RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQS 240

Query: 1144 DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKKLIGKYFEEISQDTG 965
            DMFDPRLQAKILNVVDVSYGGENGFNQAIELS+EILSNVKFIQEK+LIGKYFEEISQDTG
Sbjct: 241  DMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTG 300

Query: 964  KYVFGVDDTLKALEMGAVETLIVWENLDMTRYALKNSTTGEVVIKHLNKEQEADQSNFRD 785
            KYVFGVDDTLKALEMGAVETLIVWENLD++RY LKN+ TGE+VIKHLNKEQE++QS+FRD
Sbjct: 301  KYVFGVDDTLKALEMGAVETLIVWENLDISRYVLKNNITGEIVIKHLNKEQESNQSHFRD 360

Query: 784  PGSSADYEVLEKMSLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM 605
              +SA+ EV EKMSLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM
Sbjct: 361  TATSAELEVQEKMSLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM 420

Query: 604  RTF 596
            R+F
Sbjct: 421  RSF 423


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