BLASTX nr result

ID: Glycyrrhiza24_contig00002233 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00002233
         (1182 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271949.1| PREDICTED: transcription factor TCP20-like [...   233   2e-84
ref|XP_002512905.1| transcription factor, putative [Ricinus comm...   249   7e-83
gb|ADL36832.1| TCP domain class transcription factor [Malus x do...   239   1e-80
ref|XP_002298640.1| predicted protein [Populus trichocarpa] gi|2...   239   3e-78
ref|XP_003553949.1| PREDICTED: transcription factor TCP20-like [...   228   7e-76

>ref|XP_002271949.1| PREDICTED: transcription factor TCP20-like [Vitis vinifera]
          Length = 296

 Score =  233 bits (595), Expect(3) = 2e-84
 Identities = 135/196 (68%), Positives = 140/196 (71%), Gaps = 2/196 (1%)
 Frame = +2

Query: 344 KKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEP 523
           KKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEP
Sbjct: 45  KKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEP 104

Query: 524 SIIAATGTGTIP-XXXXXXXXXXXXQGTSLSAGLHTQKIDELGG-XXXXXXXXXXWGMVG 697
           SIIAATGTGTIP             QGTS+SAGLH QKIDELGG           W MVG
Sbjct: 105 SIIAATGTGTIPASALAAAGGSVSQQGTSISAGLH-QKIDELGGSSIGSGSSRTSWAMVG 163

Query: 698 GNLGRPHHVATSGLLWPQHHVXXXXXXXXXXXPSNANLGSDSSNYLQKIGFPGFDLPVSV 877
            NLGRP HVAT   LWP               PS  NLG++SSNYLQKI FPGFDLP + 
Sbjct: 164 ANLGRP-HVATG--LWPP---VSGFGFQSSSGPSTTNLGNESSNYLQKIAFPGFDLPAT- 216

Query: 878 SAANNNMGPMSFTSIL 925
                N+GPMSFTSIL
Sbjct: 217 -----NLGPMSFTSIL 227



 Score = 64.3 bits (155), Expect(3) = 2e-84
 Identities = 34/44 (77%), Positives = 34/44 (77%)
 Frame = +1

Query: 121 MDPKGSKQPQEVPNFLSXXXXXXXXXXMGENKPAEVKDFQIVIA 252
           MDPKGSKQPQEVPNFLS          MGENKPAEVKDFQIVIA
Sbjct: 1   MDPKGSKQPQEVPNFLS-----LPQPNMGENKPAEVKDFQIVIA 39



 Score = 63.9 bits (154), Expect(3) = 2e-84
 Identities = 32/39 (82%), Positives = 36/39 (92%)
 Frame = +1

Query: 1018 NHQQIPGLELGLSQDGQHIGVLNPQALSQIYQQIGQTRV 1134
            ++QQ+PGLELGLSQDG HIGVLN QALSQIYQQ+GQ RV
Sbjct: 230  SNQQLPGLELGLSQDG-HIGVLNSQALSQIYQQMGQARV 267


>ref|XP_002512905.1| transcription factor, putative [Ricinus communis]
           gi|223547916|gb|EEF49408.1| transcription factor,
           putative [Ricinus communis]
          Length = 320

 Score =  249 bits (637), Expect(3) = 7e-83
 Identities = 139/197 (70%), Positives = 145/197 (73%), Gaps = 3/197 (1%)
 Frame = +2

Query: 344 KKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEP 523
           KKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEP
Sbjct: 69  KKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEP 128

Query: 524 SIIAATGTGTIP-XXXXXXXXXXXXQGTSLSAGLHTQKIDELGG--XXXXXXXXXXWGMV 694
           SIIAATGTGTIP             QGTSLSAGLH QKID+LGG            W MV
Sbjct: 129 SIIAATGTGTIPASALVAAGGSVSQQGTSLSAGLH-QKIDDLGGSSSITSSNSRTSWAMV 187

Query: 695 GGNLGRPHHVATSGLLWPQHHVXXXXXXXXXXXPSNANLGSDSSNYLQKIGFPGFDLPVS 874
           GGNLGRPHHVAT+G LWP               P  +NLG++SS+YLQKIGFPGFDLP  
Sbjct: 188 GGNLGRPHHVATTG-LWPPVGGFGFQSSSTTTGPVTSNLGNESSSYLQKIGFPGFDLP-- 244

Query: 875 VSAANNNMGPMSFTSIL 925
                NNMGPMSFTSIL
Sbjct: 245 ----GNNMGPMSFTSIL 257



 Score = 63.2 bits (152), Expect(3) = 7e-83
 Identities = 32/39 (82%), Positives = 35/39 (89%)
 Frame = +1

Query: 1018 NHQQIPGLELGLSQDGQHIGVLNPQALSQIYQQIGQTRV 1134
            ++QQIPGLELGLSQDG HIGVLN QA SQIYQQ+GQ RV
Sbjct: 261  SNQQIPGLELGLSQDG-HIGVLNSQAFSQIYQQMGQARV 298



 Score = 43.9 bits (102), Expect(3) = 7e-83
 Identities = 28/63 (44%), Positives = 31/63 (49%), Gaps = 19/63 (30%)
 Frame = +1

Query: 121 MDPKGS--KQPQEVPNFLSXXXXXXXXXX-----------------MGENKPAEVKDFQI 243
           MDPK S  K P E+PNFL+                           MGENKPAE+KDFQI
Sbjct: 1   MDPKSSNSKNPHELPNFLTHPPQPALQQQQQPQQEQQHQNQKQQTNMGENKPAEIKDFQI 60

Query: 244 VIA 252
           VIA
Sbjct: 61  VIA 63


>gb|ADL36832.1| TCP domain class transcription factor [Malus x domestica]
          Length = 315

 Score =  239 bits (611), Expect(3) = 1e-80
 Identities = 139/196 (70%), Positives = 143/196 (72%), Gaps = 2/196 (1%)
 Frame = +2

Query: 344 KKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEP 523
           KKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEP
Sbjct: 65  KKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEP 124

Query: 524 SIIAATGTGTIP-XXXXXXXXXXXXQGTSLSAGLHTQKIDELGGXXXXXXXXXXWGMVGG 700
           SI+A TGTGTIP             QGTSLSAGLH QKIDELGG          W MVGG
Sbjct: 125 SIVATTGTGTIPASALAAAGGSVSQQGTSLSAGLH-QKIDELGG---SSGGRTSWAMVGG 180

Query: 701 NLGRPHHVATSGLLWPQHHVXXXXXXXXXXXPS-NANLGSDSSNYLQKIGFPGFDLPVSV 877
           NLGRP HVA  G LWP   V           PS   NLG++SSNYLQKIGFPGFDLPVS 
Sbjct: 181 NLGRP-HVAGVGGLWPP--VSSFGFQSSSGPPSATTNLGTESSNYLQKIGFPGFDLPVS- 236

Query: 878 SAANNNMGPMSFTSIL 925
                N+GPMSFTSIL
Sbjct: 237 -----NLGPMSFTSIL 247



 Score = 61.2 bits (147), Expect(3) = 1e-80
 Identities = 31/37 (83%), Positives = 33/37 (89%)
 Frame = +1

Query: 1024 QQIPGLELGLSQDGQHIGVLNPQALSQIYQQIGQTRV 1134
            QQ+PGLELGLSQDG HIGVLN QALSQIYQQ+G  RV
Sbjct: 256  QQLPGLELGLSQDG-HIGVLNSQALSQIYQQMGHARV 291



 Score = 48.5 bits (114), Expect(3) = 1e-80
 Identities = 27/58 (46%), Positives = 32/58 (55%), Gaps = 14/58 (24%)
 Frame = +1

Query: 121 MDPKGSKQPQEVPNFLSXXXXXXXXXX--------------MGENKPAEVKDFQIVIA 252
           MDPKGSKQ Q++P+FLS                        M +NKPAE+KDFQIVIA
Sbjct: 1   MDPKGSKQTQDIPSFLSLPPQSQPQPEQQQQPQQQPQPNNNMSDNKPAEIKDFQIVIA 58


>ref|XP_002298640.1| predicted protein [Populus trichocarpa] gi|222845898|gb|EEE83445.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score =  239 bits (609), Expect(3) = 3e-78
 Identities = 134/200 (67%), Positives = 143/200 (71%), Gaps = 6/200 (3%)
 Frame = +2

Query: 344 KKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEP 523
           KKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEP
Sbjct: 72  KKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEP 131

Query: 524 SIIAATGTGTIP-XXXXXXXXXXXXQGTSLSAGLHTQKIDELGGXXXXXXXXXXWGMVGG 700
           SIIAATGTGTIP             QG SLSAGLH QKID+LGG          W M+GG
Sbjct: 132 SIIAATGTGTIPASALAAAGGAISQQGASLSAGLH-QKIDDLGG---SSSSRASWAMLGG 187

Query: 701 NLGRPHHVATSGLLWPQHHVXXXXXXXXXXXPSNANLGSDS-----SNYLQKIGFPGFDL 865
           NLGRPHHV T+G LWP               PS  N+G+++     S+YLQK+GFPGFDL
Sbjct: 188 NLGRPHHVTTAG-LWPPVGGYGFQSSSNSTGPSTTNIGTEAAAAGGSSYLQKLGFPGFDL 246

Query: 866 PVSVSAANNNMGPMSFTSIL 925
           P       NNMGPMSFTSIL
Sbjct: 247 P------GNNMGPMSFTSIL 260



 Score = 61.2 bits (147), Expect(3) = 3e-78
 Identities = 30/37 (81%), Positives = 34/37 (91%)
 Frame = +1

Query: 1024 QQIPGLELGLSQDGQHIGVLNPQALSQIYQQIGQTRV 1134
            QQ+PGLELGLSQDG HIGVL+PQAL+QIYQQ+G  RV
Sbjct: 265  QQLPGLELGLSQDG-HIGVLSPQALNQIYQQMGHARV 300



 Score = 41.2 bits (95), Expect(3) = 3e-78
 Identities = 26/66 (39%), Positives = 31/66 (46%), Gaps = 22/66 (33%)
 Frame = +1

Query: 121 MDPKGS--KQPQEVPNFLSXXXXXXXXXX--------------------MGENKPAEVKD 234
           MDPKGS  K P E+P FL+                              MG+NKPAE+KD
Sbjct: 1   MDPKGSNSKNPHELPTFLTHTHPSPPHPPPQPHLQQPQQLHSQNQQQPNMGDNKPAEIKD 60

Query: 235 FQIVIA 252
           FQIV+A
Sbjct: 61  FQIVVA 66


>ref|XP_003553949.1| PREDICTED: transcription factor TCP20-like [Glycine max]
          Length = 330

 Score =  228 bits (580), Expect(3) = 7e-76
 Identities = 134/204 (65%), Positives = 142/204 (69%), Gaps = 10/204 (4%)
 Frame = +2

Query: 344 KKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEP 523
           ++QLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEP
Sbjct: 62  QQQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEP 121

Query: 524 SIIAATGTGTIP-XXXXXXXXXXXXQGTSLSAGLH--TQKIDELGGXXXXXXXXXXWGMV 694
           SIIAATGTGTIP             QG+SLS+ LH   QKIDEL G          W MV
Sbjct: 122 SIIAATGTGTIPASALAAAGNSLSPQGSSLSSALHHQHQKIDEL-GCGSGGSSRASWQMV 180

Query: 695 GGNLGRPH-HVATSGLLWPQH------HVXXXXXXXXXXXPSNANLGSDSSNYLQKIGFP 853
           GGNLGRPH  VAT+G LWP H                   PSNA L ++SSNYLQKI FP
Sbjct: 181 GGNLGRPHLGVATTG-LWPPHVSGFGFQTATTTTTTTSSGPSNATLATESSNYLQKIAFP 239

Query: 854 GFDLPVSVSAANNNMGPMSFTSIL 925
           GFDLP S +    NMG MSFTSIL
Sbjct: 240 GFDLPTSAT----NMGHMSFTSIL 259



 Score = 57.0 bits (136), Expect(3) = 7e-76
 Identities = 28/32 (87%), Positives = 31/32 (96%)
 Frame = +1

Query: 1024 QQIPGLELGLSQDGQHIGVLNPQALSQIYQQI 1119
            QQ+PGLELGLSQDG HIGVLNPQAL+QIYQQ+
Sbjct: 265  QQMPGLELGLSQDG-HIGVLNPQALNQIYQQM 295



 Score = 48.5 bits (114), Expect(3) = 7e-76
 Identities = 31/53 (58%), Positives = 33/53 (62%), Gaps = 9/53 (16%)
 Frame = +1

Query: 121 MDPKGSKQ--PQEV-PNFLSXXXXXXXXXX------MGENKPAEVKDFQIVIA 252
           MDPKGSKQ  PQEV P FLS                MGENKP+EVKDFQIV+A
Sbjct: 1   MDPKGSKQQQPQEVVPKFLSLPQHHYQQQGNSNNNNMGENKPSEVKDFQIVVA 53


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