BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00002207
         (998 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002883963.1| RNA-dependent RNA polymerase family protein ...   102   1e-19
ref|XP_002883965.1| RNA-dependent RNA polymerase family protein ...   102   2e-19
ref|XP_002310026.1| hypothetical protein POPTRDRAFT_562705 [Popu...   101   2e-19
ref|XP_002336366.1| rna-dependent RNA polymerase [Populus tricho...   101   3e-19
ref|NP_179582.2| RNA-dependent RNA polymerase family protein [Ar...   100   4e-19

>ref|XP_002883963.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297329803|gb|EFH60222.1| RNA-dependent
           RNA polymerase family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 981

 Score =  102 bits (254), Expect = 1e-19
 Identities = 45/62 (72%), Positives = 53/62 (85%)
 Frame = -1

Query: 704 VYRNPGMHFGDIHILHARYVEGLESYVGQSKYAIFFPCVGPRSIADEIAGGNFDGDVYRV 525
           VYRNPG+HFGDIHIL A YV+ LE YVG SKYA+FFP  GPRS+ DEIAGG+FDGD+Y +
Sbjct: 635 VYRNPGLHFGDIHILKATYVKALEEYVGNSKYAVFFPQKGPRSLGDEIAGGDFDGDMYFI 694

Query: 524 SK 519
           S+
Sbjct: 695 SR 696


>ref|XP_002883965.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297329805|gb|EFH60224.1| RNA-dependent
           RNA polymerase family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 934

 Score =  102 bits (253), Expect = 2e-19
 Identities = 44/62 (70%), Positives = 53/62 (85%)
 Frame = -1

Query: 704 VYRNPGMHFGDIHILHARYVEGLESYVGQSKYAIFFPCVGPRSIADEIAGGNFDGDVYRV 525
           VYRNPG+HFGDIH+L A YV+ LE YVG SKYA+FFP  GPRS+ DEIAGG+FDGD+Y +
Sbjct: 584 VYRNPGLHFGDIHVLKATYVKALEDYVGNSKYAVFFPQKGPRSLGDEIAGGDFDGDMYFI 643

Query: 524 SK 519
           S+
Sbjct: 644 SR 645


>ref|XP_002310026.1| hypothetical protein POPTRDRAFT_562705 [Populus trichocarpa]
           gi|222852929|gb|EEE90476.1| hypothetical protein
           POPTRDRAFT_562705 [Populus trichocarpa]
          Length = 406

 Score =  101 bits (252), Expect = 2e-19
 Identities = 44/62 (70%), Positives = 54/62 (87%)
 Frame = -1

Query: 704 VYRNPGMHFGDIHILHARYVEGLESYVGQSKYAIFFPCVGPRSIADEIAGGNFDGDVYRV 525
           VYRNPG+HFGDIHIL A YV  LE +VG +KYAIFFPC GPRS+ADE++GG+FDGD++ V
Sbjct: 333 VYRNPGLHFGDIHILKATYVRELEDFVGNAKYAIFFPCKGPRSLADEMSGGDFDGDMFFV 392

Query: 524 SK 519
           S+
Sbjct: 393 SR 394


>ref|XP_002336366.1| rna-dependent RNA polymerase [Populus trichocarpa]
           gi|222834816|gb|EEE73265.1| rna-dependent RNA polymerase
           [Populus trichocarpa]
          Length = 320

 Score =  101 bits (251), Expect = 3e-19
 Identities = 43/62 (69%), Positives = 54/62 (87%)
 Frame = -1

Query: 704 VYRNPGMHFGDIHILHARYVEGLESYVGQSKYAIFFPCVGPRSIADEIAGGNFDGDVYRV 525
           +YRNPG+HFGDIHIL A YV  LE +VG +KYAIFFPC GPRS+ADE++GG+FDGD++ V
Sbjct: 109 IYRNPGLHFGDIHILKATYVRELEDFVGNAKYAIFFPCKGPRSLADEMSGGDFDGDMFFV 168

Query: 524 SK 519
           S+
Sbjct: 169 SR 170


>ref|NP_179582.2| RNA-dependent RNA polymerase family protein [Arabidopsis thaliana]
           gi|322967571|sp|O82189.2|RDR4_ARATH RecName:
           Full=Probable RNA-dependent RNA polymerase 4;
           Short=AtRDRP4; AltName: Full=RNA-directed RNA polymerase
           4 gi|330251849|gb|AEC06943.1| RNA-dependent RNA
           polymerase family protein [Arabidopsis thaliana]
          Length = 927

 Score =  100 bits (250), Expect = 4e-19
 Identities = 44/62 (70%), Positives = 52/62 (83%)
 Frame = -1

Query: 704 VYRNPGMHFGDIHILHARYVEGLESYVGQSKYAIFFPCVGPRSIADEIAGGNFDGDVYRV 525
           VYRNPG+HFGDIHIL A YV+ LE YVG SKY +FFP  GPRS+ DEIAGG+FDGD+Y +
Sbjct: 631 VYRNPGLHFGDIHILKATYVKSLEQYVGNSKYGVFFPQKGPRSLGDEIAGGDFDGDMYFI 690

Query: 524 SK 519
           S+
Sbjct: 691 SR 692