BLASTX nr result

ID: Glycyrrhiza24_contig00002200 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00002200
         (741 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW58221.1| histone H3.2 [Zea mays]                                235   6e-60
ref|XP_003621457.1| Histone H3 [Medicago truncatula] gi|35549647...   235   6e-60
tpg|DAA55311.1| TPA: histone H3.2 [Zea mays]                          233   3e-59
gb|AFW84465.1| putative vesicle-associated membrane protein fami...   231   9e-59
ref|XP_003630193.1| Histone H3 [Medicago truncatula] gi|35751981...   231   9e-59

>gb|AFW58221.1| histone H3.2 [Zea mays]
          Length = 171

 Score =  235 bits (600), Expect = 6e-60
 Identities = 126/145 (86%), Positives = 130/145 (89%)
 Frame = -3

Query: 733 HISNPISKHSAICITQ*DSRSFFSIPMARTKQTARKSTGGKAPRKQLATKAARKSAPATG 554
           H S+PIS   +       + S  S PMARTKQTARKSTGGKAPRKQLATKAARKSAPATG
Sbjct: 11  HSSHPISNFKSFDRAAPPALSQLS-PMARTKQTARKSTGGKAPRKQLATKAARKSAPATG 69

Query: 553 GVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQ 374
           GVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAV+ALQ
Sbjct: 70  GVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQ 129

Query: 373 EAAEAYLVGLFEDTNLCAIHAKRVT 299
           EAAEAYLVGLFEDTNLCAIHAKRVT
Sbjct: 130 EAAEAYLVGLFEDTNLCAIHAKRVT 154


>ref|XP_003621457.1| Histone H3 [Medicago truncatula] gi|355496472|gb|AES77675.1|
           Histone H3 [Medicago truncatula]
          Length = 235

 Score =  235 bits (600), Expect = 6e-60
 Identities = 121/125 (96%), Positives = 122/125 (97%)
 Frame = -3

Query: 673 SFFSIPMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRK 494
           +F   PMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRK
Sbjct: 94  NFSLFPMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRK 153

Query: 493 YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIH 314
           YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIH
Sbjct: 154 YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIH 213

Query: 313 AKRVT 299
           AKRVT
Sbjct: 214 AKRVT 218


>tpg|DAA55311.1| TPA: histone H3.2 [Zea mays]
          Length = 245

 Score =  233 bits (594), Expect = 3e-59
 Identities = 119/120 (99%), Positives = 120/120 (100%)
 Frame = -3

Query: 658 PMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKST 479
           PMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKST
Sbjct: 109 PMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKST 168

Query: 478 ELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVT 299
           ELLIRKLPFQRLVREIAQDFKTDLRFQSSAV+ALQEAAEAYLVGLFEDTNLCAIHAKRVT
Sbjct: 169 ELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVT 228


>gb|AFW84465.1| putative vesicle-associated membrane protein family protein [Zea
           mays]
          Length = 359

 Score =  231 bits (590), Expect = 9e-59
 Identities = 119/119 (100%), Positives = 119/119 (100%)
 Frame = -3

Query: 655 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 476
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 475 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVT 299
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVT
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVT 119


>ref|XP_003630193.1| Histone H3 [Medicago truncatula] gi|357519813|ref|XP_003630195.1|
           Histone H3 [Medicago truncatula]
           gi|355524215|gb|AET04669.1| Histone H3 [Medicago
           truncatula] gi|355524217|gb|AET04671.1| Histone H3
           [Medicago truncatula]
          Length = 213

 Score =  231 bits (590), Expect = 9e-59
 Identities = 119/119 (100%), Positives = 119/119 (100%)
 Frame = -3

Query: 655 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 476
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 475 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVT 299
           LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVT
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVT 119


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