BLASTX nr result

ID: Glycyrrhiza24_contig00002155 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00002155
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525988.1| PREDICTED: NADH dehydrogenase [ubiquinone] i...   157   6e-37
ref|XP_003522238.1| PREDICTED: NADH dehydrogenase [ubiquinone] i...   157   6e-37
ref|XP_003603142.1| NADH-ubiquinone oxidoreductase subunit-like ...   149   2e-34
gb|ACJ86164.1| unknown [Medicago truncatula]                          149   2e-34
gb|AAF01037.1| NADH ubiquinone oxidoreductase PSST subunit [Lupi...   145   3e-33

>ref|XP_003525988.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 7,
           mitochondrial-like isoform 1 [Glycine max]
           gi|356514591|ref|XP_003525989.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] iron-sulfur protein 7,
           mitochondrial-like isoform 2 [Glycine max]
          Length = 213

 Score =  157 bits (398), Expect = 6e-37
 Identities = 83/121 (68%), Positives = 85/121 (70%), Gaps = 7/121 (5%)
 Frame = +3

Query: 69  MALLSRTASRFPQLVSPQRVVXXXXXXXXXXXXXXXXXXXXXXXXX-------VGVSKTA 227
           MALLSR +SRFPQLVSPQRVV                                 GVSK A
Sbjct: 1   MALLSRASSRFPQLVSPQRVVSLHTTLPSLNASPSTATPTPYAPPPPPSASSPAGVSKAA 60

Query: 228 EYVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGGARYDLDRFGIIFRPSPRQSDCM 407
           E+VISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTG ARYDLDRFGIIFRPSPRQSDCM
Sbjct: 61  EFVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDCM 120

Query: 408 I 410
           I
Sbjct: 121 I 121


>ref|XP_003522238.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 7,
           mitochondrial-like [Glycine max]
          Length = 213

 Score =  157 bits (398), Expect = 6e-37
 Identities = 83/121 (68%), Positives = 85/121 (70%), Gaps = 7/121 (5%)
 Frame = +3

Query: 69  MALLSRTASRFPQLVSPQRVVXXXXXXXXXXXXXXXXXXXXXXXXX-------VGVSKTA 227
           MALLSR +SRFPQLVSPQRVV                                 GVSK A
Sbjct: 1   MALLSRASSRFPQLVSPQRVVSLHTTLPSLNASTSTPTPAPYAPPPPPSASPPAGVSKAA 60

Query: 228 EYVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGGARYDLDRFGIIFRPSPRQSDCM 407
           E+VISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTG ARYDLDRFGIIFRPSPRQSDCM
Sbjct: 61  EFVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDCM 120

Query: 408 I 410
           I
Sbjct: 121 I 121


>ref|XP_003603142.1| NADH-ubiquinone oxidoreductase subunit-like protein [Medicago
           truncatula] gi|355492190|gb|AES73393.1| NADH-ubiquinone
           oxidoreductase subunit-like protein [Medicago
           truncatula] gi|388521945|gb|AFK49034.1| unknown
           [Medicago truncatula]
          Length = 210

 Score =  149 bits (377), Expect = 2e-34
 Identities = 77/116 (66%), Positives = 82/116 (70%), Gaps = 3/116 (2%)
 Frame = +3

Query: 72  ALLSRTASRFPQLVSPQRVVXXXXXXXXXXXXXXXXXXXXXXXXX---VGVSKTAEYVIS 242
           A L+RT+SRF QL SPQR+                             VG+SKTAEYVIS
Sbjct: 3   AFLTRTSSRFSQLSSPQRIASLHTTLPSLSSTTPTPYAPPPPPSTTSPVGISKTAEYVIS 62

Query: 243 KVDDLMNWARRGSIWPMTFGLACCAVEMMHTGGARYDLDRFGIIFRPSPRQSDCMI 410
           KVD+LMNWAR GSIWPMTFGLACCAVEMMHTG ARYDLDRFGIIFRPSPRQSDCMI
Sbjct: 63  KVDNLMNWARTGSIWPMTFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDCMI 118


>gb|ACJ86164.1| unknown [Medicago truncatula]
          Length = 198

 Score =  149 bits (377), Expect = 2e-34
 Identities = 77/116 (66%), Positives = 82/116 (70%), Gaps = 3/116 (2%)
 Frame = +3

Query: 72  ALLSRTASRFPQLVSPQRVVXXXXXXXXXXXXXXXXXXXXXXXXX---VGVSKTAEYVIS 242
           A L+RT+SRF QL SPQR+                             VG+SKTAEYVIS
Sbjct: 3   AFLTRTSSRFSQLSSPQRIASLHTTLPSLSSTTPTPYAPPPLPSTTSPVGISKTAEYVIS 62

Query: 243 KVDDLMNWARRGSIWPMTFGLACCAVEMMHTGGARYDLDRFGIIFRPSPRQSDCMI 410
           KVD+LMNWAR GSIWPMTFGLACCAVEMMHTG ARYDLDRFGIIFRPSPRQSDCMI
Sbjct: 63  KVDNLMNWARTGSIWPMTFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDCMI 118


>gb|AAF01037.1| NADH ubiquinone oxidoreductase PSST subunit [Lupinus luteus]
          Length = 213

 Score =  145 bits (367), Expect = 3e-33
 Identities = 76/121 (62%), Positives = 82/121 (67%), Gaps = 7/121 (5%)
 Frame = +3

Query: 69  MALLSRTASRFPQL-------VSPQRVVXXXXXXXXXXXXXXXXXXXXXXXXXVGVSKTA 227
           MALL+RTA+R PQL       +S    +                          G+SKTA
Sbjct: 1   MALLTRTATRLPQLAPSSHRILSLHTTLPSLSPDTAATPAPYSRPPPPSTSSTAGISKTA 60

Query: 228 EYVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGGARYDLDRFGIIFRPSPRQSDCM 407
           E+VISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTG ARYDLDRFGIIFRPSPRQSDCM
Sbjct: 61  EFVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDCM 120

Query: 408 I 410
           I
Sbjct: 121 I 121


Top