BLASTX nr result

ID: Glycyrrhiza24_contig00002125 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00002125
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536478.1| PREDICTED: DNA-directed RNA polymerases I, I...   109   3e-22
ref|NP_001236044.1| uncharacterized protein LOC100305739 [Glycin...   107   8e-22
ref|XP_002318240.1| predicted protein [Populus trichocarpa] gi|2...   104   9e-21
gb|AFK33543.1| unknown [Lotus japonicus]                              103   1e-20
ref|XP_002322450.1| predicted protein [Populus trichocarpa] gi|2...   103   2e-20

>ref|XP_003536478.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC2-like [Glycine max]
          Length = 142

 Score =  109 bits (272), Expect = 3e-22
 Identities = 53/55 (96%), Positives = 55/55 (100%)
 Frame = -2

Query: 167 DTEEKEEDQPVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLE 3
           DTE+KEE+QPVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLE
Sbjct: 43  DTEDKEEEQPVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLE 97


>ref|NP_001236044.1| uncharacterized protein LOC100305739 [Glycine max]
           gi|255626491|gb|ACU13590.1| unknown [Glycine max]
          Length = 142

 Score =  107 bits (268), Expect = 8e-22
 Identities = 52/55 (94%), Positives = 55/55 (100%)
 Frame = -2

Query: 167 DTEEKEEDQPVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLE 3
           DTE+KEE+QPV+RPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLE
Sbjct: 43  DTEDKEEEQPVKRPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLE 97


>ref|XP_002318240.1| predicted protein [Populus trichocarpa] gi|222858913|gb|EEE96460.1|
           predicted protein [Populus trichocarpa]
          Length = 143

 Score =  104 bits (259), Expect = 9e-21
 Identities = 50/55 (90%), Positives = 54/55 (98%)
 Frame = -2

Query: 167 DTEEKEEDQPVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLE 3
           +TE+KEE +PVERPRKTSK+MTKYERARILGTRALQISMNAPVMVELEGETDPLE
Sbjct: 44  ETEDKEEQEPVERPRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLE 98


>gb|AFK33543.1| unknown [Lotus japonicus]
          Length = 144

 Score =  103 bits (257), Expect = 1e-20
 Identities = 51/55 (92%), Positives = 53/55 (96%)
 Frame = -2

Query: 167 DTEEKEEDQPVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLE 3
           +TEEKEE QPV+RPRKTSKYMTKYERARILGTRALQISMNAPVMVEL GETDPLE
Sbjct: 45  ETEEKEEVQPVQRPRKTSKYMTKYERARILGTRALQISMNAPVMVELAGETDPLE 99


>ref|XP_002322450.1| predicted protein [Populus trichocarpa] gi|222869446|gb|EEF06577.1|
           predicted protein [Populus trichocarpa]
          Length = 143

 Score =  103 bits (256), Expect = 2e-20
 Identities = 50/55 (90%), Positives = 53/55 (96%)
 Frame = -2

Query: 167 DTEEKEEDQPVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLE 3
           +TE+KEE  PVERPRKTSK+MTKYERARILGTRALQISMNAPVMVELEGETDPLE
Sbjct: 44  ETEDKEEQAPVERPRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLE 98


Top