BLASTX nr result

ID: Glycyrrhiza24_contig00002124 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00002124
         (833 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001235983.1| MYB transcription factor MYB139 [Glycine max...   251   2e-64
gb|AFK29427.1| R2R3MYB transcription factor, partial [Lotus japo...   231   2e-58
gb|AFK49370.1| unknown [Medicago truncatula]                          211   1e-52
ref|XP_003597326.1| Myb-like transcription factor [Medicago trun...   204   3e-50
gb|AFK29424.1| R2R3MYB transcription factor, partial [Lotus japo...   203   4e-50

>ref|NP_001235983.1| MYB transcription factor MYB139 [Glycine max]
           gi|110931722|gb|ABH02860.1| MYB transcription factor
           MYB139 [Glycine max]
          Length = 264

 Score =  251 bits (640), Expect = 2e-64
 Identities = 140/228 (61%), Positives = 153/228 (67%), Gaps = 13/228 (5%)
 Frame = -2

Query: 760 FVVGLSRTGKSCRLRWVNYLHPDLKRGKMTPQEERLVLELHSKWGNR---WSRIARKLPG 590
           F+  ++RTGKSCRLRWVNYLHP LKRGKMTPQEERLVLELHSKWGNR   WSRIARKLPG
Sbjct: 33  FIAKVNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHSKWGNRSPWWSRIARKLPG 92

Query: 589 RTDNEIKNYWRTYMRKKRAQEKKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 410
           RTDNEIKNYWRT MRKK AQEKKR                                    
Sbjct: 93  RTDNEIKNYWRTLMRKK-AQEKKR--------------GEAASSSPTPSSVDSSISSNNH 137

Query: 409 XXXSHASKEAGEESFYDTGGPN-MIGHAELQG--------YSMDDIWKDI-AVSEDHGIN 260
               HASK+AGEESFYDTGG N +I   + QG        +SMDDIWKDI  +SE+   N
Sbjct: 138 AVDPHASKKAGEESFYDTGGDNGVIAATQDQGQKGDQQGLFSMDDIWKDIDNMSEE---N 194

Query: 259 NINLQPVEVYEGHSEEGCNFSCPPLMPSPPSWDYNYYSSDPLWVMDIE 116
           N  LQPV VY+GHSEEGCNFSCPP +PSP SW+Y+  SSDPLWVMD E
Sbjct: 195 NTTLQPVSVYDGHSEEGCNFSCPPQVPSPSSWEYS--SSDPLWVMDEE 240


>gb|AFK29427.1| R2R3MYB transcription factor, partial [Lotus japonicus]
          Length = 202

 Score =  231 bits (588), Expect = 2e-58
 Identities = 129/216 (59%), Positives = 143/216 (66%), Gaps = 12/216 (5%)
 Frame = -2

Query: 721 LRWVNYLHPDLKRGKMTPQEERLVLELHSKWGNRWSRIARKLPGRTDNEIKNYWRTYMRK 542
           LRWVNYLHPDLKRGKMTPQEERLV ELHSKWGNRWSRIARKLPGRTDNEIKNYWRT+MRK
Sbjct: 1   LRWVNYLHPDLKRGKMTPQEERLVTELHSKWGNRWSRIARKLPGRTDNEIKNYWRTHMRK 60

Query: 541 KRAQEKKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSHASKEAGEE-SF 365
           K+AQEK++                                       SHASKEAGEE SF
Sbjct: 61  KKAQEKEK---------KRAAEAASSSSPADSSSCESSLTSNNHGVDSHASKEAGEEDSF 111

Query: 364 YDTGGPNMIGHAEL-----------QGYSMDDIWKDIAVSEDHGINNINLQPVEVYEGHS 218
           YDTGG + + +  +           QGYSMDDIWKDIA+SED    N NLQP  V++G+S
Sbjct: 112 YDTGGAHNMNNVHVIGEDHQDGGDDQGYSMDDIWKDIAMSED---ENFNLQP--VFDGYS 166

Query: 217 EEGCNFSCPPLMPSPPSWDYNYYSSDPLWVMDIEEE 110
           E+GCNFS PPL    PSWD   YSSDPLWVMD E+E
Sbjct: 167 EKGCNFSYPPLF--SPSWD---YSSDPLWVMDDEKE 197


>gb|AFK49370.1| unknown [Medicago truncatula]
          Length = 217

 Score =  211 bits (538), Expect = 1e-52
 Identities = 127/233 (54%), Positives = 140/233 (60%), Gaps = 10/233 (4%)
 Frame = -2

Query: 760 FVVGLSRTGKSCRLRWVNYLHPDLKRGKMTPQEERLVLELHSKWGNRWSRIARKLPGRTD 581
           FVVGL+RTGKSCRLRWVNYLHP LKRGKMTP EERLVLEL SKWGNRWSRIARKLPGRTD
Sbjct: 17  FVVGLNRTGKSCRLRWVNYLHPGLKRGKMTPHEERLVLELQSKWGNRWSRIARKLPGRTD 76

Query: 580 NEIKNYWRTYMRKKRAQEKKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 401
           NEIKNYWRT+MRKK AQ+KKR                                       
Sbjct: 77  NEIKNYWRTHMRKK-AQDKKR---------------------------GSIQSTEHHVMN 108

Query: 400 SHASKEAGEESFYDTGGPN------MIGHAELQGYSMDDIWKDIAVSEDHGINNINLQPV 239
           SHASKEAGEESFYDTGG +      ++G    +  SMDDIWKDI +SE++ + N      
Sbjct: 109 SHASKEAGEESFYDTGGSSTSTQVKLVGEEHEKEISMDDIWKDIDLSEENSLQN------ 162

Query: 238 EVYEGHSEEGC----NFSCPPLMPSPPSWDYNYYSSDPLWVMDIEEESKMLFP 92
                  EE C    N SC P   S  SW+YN  S+D LWVM    E  MLFP
Sbjct: 163 -------EECCNINNNISCLPKTSS--SWEYN--STDSLWVMG---EESMLFP 201


>ref|XP_003597326.1| Myb-like transcription factor [Medicago truncatula]
           gi|355486374|gb|AES67577.1| Myb-like transcription
           factor [Medicago truncatula]
          Length = 243

 Score =  204 bits (518), Expect = 3e-50
 Identities = 123/229 (53%), Positives = 136/229 (59%), Gaps = 10/229 (4%)
 Frame = -2

Query: 748 LSRTGKSCRLRWVNYLHPDLKRGKMTPQEERLVLELHSKWGNRWSRIARKLPGRTDNEIK 569
           L+RTGKSCRLRWVNYLHP LKRGKMTP EERLVLEL SKWGNRWSRIARKLPGRTDNEIK
Sbjct: 47  LNRTGKSCRLRWVNYLHPGLKRGKMTPHEERLVLELQSKWGNRWSRIARKLPGRTDNEIK 106

Query: 568 NYWRTYMRKKRAQEKKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSHAS 389
           NYWRT+MRKK AQ+KKR                                       SHAS
Sbjct: 107 NYWRTHMRKK-AQDKKR---------------------------GSIQSTEHHVMNSHAS 138

Query: 388 KEAGEESFYDTGGPN------MIGHAELQGYSMDDIWKDIAVSEDHGINNINLQPVEVYE 227
           KEAGEESFYDTGG +      ++G    +  SMDDIWKDI +SE++ + N          
Sbjct: 139 KEAGEESFYDTGGSSTSTQVKLVGEEHEKEISMDDIWKDIDLSEENSLQN---------- 188

Query: 226 GHSEEGC----NFSCPPLMPSPPSWDYNYYSSDPLWVMDIEEESKMLFP 92
              EE C    N SC P   S  SW+YN  S+D LWVM    E  MLFP
Sbjct: 189 ---EECCNINNNISCLPKTSS--SWEYN--STDSLWVMG---EESMLFP 227


>gb|AFK29424.1| R2R3MYB transcription factor, partial [Lotus japonicus]
          Length = 195

 Score =  203 bits (516), Expect = 4e-50
 Identities = 121/226 (53%), Positives = 134/226 (59%), Gaps = 16/226 (7%)
 Frame = -2

Query: 721 LRWVNYLHPDLKRGKMTPQEERLVLELHSKWGNRWSRIARKLPGRTDNEIKNYWRTYMRK 542
           LRWVNYLHP LKRGK+TPQEER+VLEL SKWGNRWSRIA KLPGRTDNEIKN+WRT+MRK
Sbjct: 1   LRWVNYLHPGLKRGKLTPQEERMVLELQSKWGNRWSRIASKLPGRTDNEIKNFWRTHMRK 60

Query: 541 KRAQEKKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSHASKEAGEESFY 362
           K AQEKK+                                       SHASK+AGEESFY
Sbjct: 61  K-AQEKKK----------------GSSAVPSPTPSSISSNNNHGEDYSHASKKAGEESFY 103

Query: 361 DTGG---PNMIG-------------HAELQGYSMDDIWKDIAVSEDHGINNINLQPVEVY 230
           DTGG   P M+G             H   Q  SMDDIWKDI +SE+              
Sbjct: 104 DTGGYGHPAMVGSSSTQVKVGGGNHHDAEQEISMDDIWKDIDLSEE-------------- 149

Query: 229 EGHSEEGCNFSCPPLMPSPPSWDYNYYSSDPLWVMDIEEESKMLFP 92
             +SEEGCNFSCPP MPSP SW+   YSSDPLWVM+   E  M+FP
Sbjct: 150 --NSEEGCNFSCPP-MPSPSSWE---YSSDPLWVMN---EESMVFP 186


Top