BLASTX nr result
ID: Glycyrrhiza24_contig00002015
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00002015 (390 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003534543.1| PREDICTED: 50S ribosomal protein L5, chlorop... 91 7e-17 ref|XP_003552416.1| PREDICTED: 50S ribosomal protein L5, chlorop... 91 1e-16 gb|ACU24072.1| unknown [Glycine max] 91 1e-16 ref|XP_002278820.1| PREDICTED: 50S ribosomal protein L5, chlorop... 90 2e-16 emb|CAL07973.1| plastid ribosomal protein PRPL5 [Platanus x acer... 89 5e-16 >ref|XP_003534543.1| PREDICTED: 50S ribosomal protein L5, chloroplastic-like [Glycine max] Length = 267 Score = 91.3 bits (225), Expect = 7e-17 Identities = 41/44 (93%), Positives = 43/44 (97%) Frame = -3 Query: 388 SFLDRVVNLGLPRTRDFQGVNPNSFDGHGNFSIGIKDQSVFPEV 257 SFLDRVVNLGLPRTRDFQGVNPNSFDGHGN+SIGIKDQ VFPE+ Sbjct: 158 SFLDRVVNLGLPRTRDFQGVNPNSFDGHGNYSIGIKDQGVFPEI 201 Score = 69.7 bits (169), Expect = 2e-10 Identities = 31/40 (77%), Positives = 37/40 (92%) Frame = -2 Query: 134 RLLALMGMPFREGGEPASTIPKKRMKSHHFEAKSKGRGKK 15 +LLALMGMPFREG PA+TI KK++KSHHF+AKSKGRG+K Sbjct: 228 KLLALMGMPFREGSGPATTIRKKKLKSHHFDAKSKGRGRK 267 >ref|XP_003552416.1| PREDICTED: 50S ribosomal protein L5, chloroplastic-like [Glycine max] Length = 267 Score = 90.9 bits (224), Expect = 1e-16 Identities = 40/44 (90%), Positives = 43/44 (97%) Frame = -3 Query: 388 SFLDRVVNLGLPRTRDFQGVNPNSFDGHGNFSIGIKDQSVFPEV 257 SFLDRV+NLGLPRTRDFQGVNPNSFDGHGN+SIGIKDQ VFPE+ Sbjct: 158 SFLDRVINLGLPRTRDFQGVNPNSFDGHGNYSIGIKDQGVFPEI 201 Score = 68.6 bits (166), Expect = 5e-10 Identities = 30/40 (75%), Positives = 37/40 (92%) Frame = -2 Query: 134 RLLALMGMPFREGGEPASTIPKKRMKSHHFEAKSKGRGKK 15 +LLALMGMPFREG PA+TI KK++KSHHF+AKSKGRG++ Sbjct: 228 KLLALMGMPFREGSGPATTIRKKKLKSHHFDAKSKGRGRR 267 >gb|ACU24072.1| unknown [Glycine max] Length = 267 Score = 90.9 bits (224), Expect = 1e-16 Identities = 40/44 (90%), Positives = 43/44 (97%) Frame = -3 Query: 388 SFLDRVVNLGLPRTRDFQGVNPNSFDGHGNFSIGIKDQSVFPEV 257 SFLDRV+NLGLPRTRDFQGVNPNSFDGHGN+SIGIKDQ VFPE+ Sbjct: 158 SFLDRVINLGLPRTRDFQGVNPNSFDGHGNYSIGIKDQGVFPEI 201 Score = 68.6 bits (166), Expect = 5e-10 Identities = 30/40 (75%), Positives = 37/40 (92%) Frame = -2 Query: 134 RLLALMGMPFREGGEPASTIPKKRMKSHHFEAKSKGRGKK 15 +LLALMGMPFREG PA+TI KK++KSHHF+AKSKGRG++ Sbjct: 228 KLLALMGMPFREGSGPATTIRKKKLKSHHFDAKSKGRGRR 267 >ref|XP_002278820.1| PREDICTED: 50S ribosomal protein L5, chloroplastic [Vitis vinifera] gi|297745362|emb|CBI40442.3| unnamed protein product [Vitis vinifera] Length = 265 Score = 90.1 bits (222), Expect = 2e-16 Identities = 39/44 (88%), Positives = 44/44 (100%) Frame = -3 Query: 388 SFLDRVVNLGLPRTRDFQGVNPNSFDGHGNFSIGIKDQSVFPEV 257 SFLDR++NLGLPRTRDFQGVNPNSFDGHGN+SIG+KDQSVFPE+ Sbjct: 156 SFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGMKDQSVFPEI 199 Score = 55.5 bits (132), Expect = 4e-06 Identities = 24/40 (60%), Positives = 32/40 (80%) Frame = -2 Query: 134 RLLALMGMPFREGGEPASTIPKKRMKSHHFEAKSKGRGKK 15 +LLALMGMPFREGG KK++K+HHF++KSKGR ++ Sbjct: 226 QLLALMGMPFREGGGSTVVQRKKKLKAHHFDSKSKGRARR 265 >emb|CAL07973.1| plastid ribosomal protein PRPL5 [Platanus x acerifolia] Length = 182 Score = 88.6 bits (218), Expect = 5e-16 Identities = 38/44 (86%), Positives = 44/44 (100%) Frame = -3 Query: 388 SFLDRVVNLGLPRTRDFQGVNPNSFDGHGNFSIGIKDQSVFPEV 257 SFLDR++NLGLPRTRDFQGVNPNSFDGHGN+SIGI++QSVFPE+ Sbjct: 76 SFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGIREQSVFPEI 119