BLASTX nr result

ID: Glycyrrhiza24_contig00002015 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00002015
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534543.1| PREDICTED: 50S ribosomal protein L5, chlorop...    91   7e-17
ref|XP_003552416.1| PREDICTED: 50S ribosomal protein L5, chlorop...    91   1e-16
gb|ACU24072.1| unknown [Glycine max]                                   91   1e-16
ref|XP_002278820.1| PREDICTED: 50S ribosomal protein L5, chlorop...    90   2e-16
emb|CAL07973.1| plastid ribosomal protein PRPL5 [Platanus x acer...    89   5e-16

>ref|XP_003534543.1| PREDICTED: 50S ribosomal protein L5, chloroplastic-like [Glycine
           max]
          Length = 267

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 41/44 (93%), Positives = 43/44 (97%)
 Frame = -3

Query: 388 SFLDRVVNLGLPRTRDFQGVNPNSFDGHGNFSIGIKDQSVFPEV 257
           SFLDRVVNLGLPRTRDFQGVNPNSFDGHGN+SIGIKDQ VFPE+
Sbjct: 158 SFLDRVVNLGLPRTRDFQGVNPNSFDGHGNYSIGIKDQGVFPEI 201



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 31/40 (77%), Positives = 37/40 (92%)
 Frame = -2

Query: 134 RLLALMGMPFREGGEPASTIPKKRMKSHHFEAKSKGRGKK 15
           +LLALMGMPFREG  PA+TI KK++KSHHF+AKSKGRG+K
Sbjct: 228 KLLALMGMPFREGSGPATTIRKKKLKSHHFDAKSKGRGRK 267


>ref|XP_003552416.1| PREDICTED: 50S ribosomal protein L5, chloroplastic-like [Glycine
           max]
          Length = 267

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 40/44 (90%), Positives = 43/44 (97%)
 Frame = -3

Query: 388 SFLDRVVNLGLPRTRDFQGVNPNSFDGHGNFSIGIKDQSVFPEV 257
           SFLDRV+NLGLPRTRDFQGVNPNSFDGHGN+SIGIKDQ VFPE+
Sbjct: 158 SFLDRVINLGLPRTRDFQGVNPNSFDGHGNYSIGIKDQGVFPEI 201



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 30/40 (75%), Positives = 37/40 (92%)
 Frame = -2

Query: 134 RLLALMGMPFREGGEPASTIPKKRMKSHHFEAKSKGRGKK 15
           +LLALMGMPFREG  PA+TI KK++KSHHF+AKSKGRG++
Sbjct: 228 KLLALMGMPFREGSGPATTIRKKKLKSHHFDAKSKGRGRR 267


>gb|ACU24072.1| unknown [Glycine max]
          Length = 267

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 40/44 (90%), Positives = 43/44 (97%)
 Frame = -3

Query: 388 SFLDRVVNLGLPRTRDFQGVNPNSFDGHGNFSIGIKDQSVFPEV 257
           SFLDRV+NLGLPRTRDFQGVNPNSFDGHGN+SIGIKDQ VFPE+
Sbjct: 158 SFLDRVINLGLPRTRDFQGVNPNSFDGHGNYSIGIKDQGVFPEI 201



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 30/40 (75%), Positives = 37/40 (92%)
 Frame = -2

Query: 134 RLLALMGMPFREGGEPASTIPKKRMKSHHFEAKSKGRGKK 15
           +LLALMGMPFREG  PA+TI KK++KSHHF+AKSKGRG++
Sbjct: 228 KLLALMGMPFREGSGPATTIRKKKLKSHHFDAKSKGRGRR 267


>ref|XP_002278820.1| PREDICTED: 50S ribosomal protein L5, chloroplastic [Vitis vinifera]
           gi|297745362|emb|CBI40442.3| unnamed protein product
           [Vitis vinifera]
          Length = 265

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 39/44 (88%), Positives = 44/44 (100%)
 Frame = -3

Query: 388 SFLDRVVNLGLPRTRDFQGVNPNSFDGHGNFSIGIKDQSVFPEV 257
           SFLDR++NLGLPRTRDFQGVNPNSFDGHGN+SIG+KDQSVFPE+
Sbjct: 156 SFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGMKDQSVFPEI 199



 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 24/40 (60%), Positives = 32/40 (80%)
 Frame = -2

Query: 134 RLLALMGMPFREGGEPASTIPKKRMKSHHFEAKSKGRGKK 15
           +LLALMGMPFREGG       KK++K+HHF++KSKGR ++
Sbjct: 226 QLLALMGMPFREGGGSTVVQRKKKLKAHHFDSKSKGRARR 265


>emb|CAL07973.1| plastid ribosomal protein PRPL5 [Platanus x acerifolia]
          Length = 182

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 38/44 (86%), Positives = 44/44 (100%)
 Frame = -3

Query: 388 SFLDRVVNLGLPRTRDFQGVNPNSFDGHGNFSIGIKDQSVFPEV 257
           SFLDR++NLGLPRTRDFQGVNPNSFDGHGN+SIGI++QSVFPE+
Sbjct: 76  SFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGIREQSVFPEI 119


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