BLASTX nr result

ID: Glycyrrhiza24_contig00001953 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00001953
         (1903 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522620.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   771   0.0  
ref|XP_003526412.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   771   0.0  
gb|AFV30230.1| ATP-dependent RNA helicase [Medicago sativa]           764   0.0  
ref|XP_003588757.1| DEAD-box ATP-dependent RNA helicase [Medicag...   764   0.0  
gb|AFK41905.1| unknown [Medicago truncatula]                          759   0.0  

>ref|XP_003522620.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like [Glycine max]
          Length = 427

 Score =  771 bits (1992), Expect = 0.0
 Identities = 390/427 (91%), Positives = 391/427 (91%)
 Frame = +1

Query: 169  MGETXXXXXXXXXXXXXXXXXXXPDSAGAKVNGEAAKKGYVGIHSSGFRDFLLKPELLRA 348
            MGET                   PDSAGAKVNGEA KKGYVGIHSSGFRDFLLKPELLRA
Sbjct: 1    MGETKDEAYEEELLDYEEEDDKAPDSAGAKVNGEATKKGYVGIHSSGFRDFLLKPELLRA 60

Query: 349  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVPGQVSALVL 528
            IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVPGQVSALVL
Sbjct: 61   IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVPGQVSALVL 120

Query: 529  CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKVHKDLLKNECPHIVVGTPGRILAL 708
            CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKVHKDLLKNECPHIVVGTPGRILAL
Sbjct: 121  CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKVHKDLLKNECPHIVVGTPGRILAL 180

Query: 709  ARDKDLSLKNVRHFILDECDKMLESLDMRKDVQDIFKMTPHDKQVMMFSATLSKEIRPVC 888
             RDKDLSLKNVRHFILDECDKMLESLDMRKDVQDIFKMTPHDKQVMMFSATLSKEIRPVC
Sbjct: 181  TRDKDLSLKNVRHFILDECDKMLESLDMRKDVQDIFKMTPHDKQVMMFSATLSKEIRPVC 240

Query: 889  KKFMQDPMEIYVDDEAKLTLHGLVQHYIXXXXXXXXXXXXXXXDALDFNQVVIFVKSVSR 1068
            KKFMQDPMEIYVDDEAKLTLHGLVQHYI               DALDFNQVVIFVKSVSR
Sbjct: 241  KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLKEEEKNRKLNDLLDALDFNQVVIFVKSVSR 300

Query: 1069 AAELDKLLVECNFPSICIHSGMSQEERLKRYKGFKEGHTRILVATDLVGRGIDIERVNIV 1248
            AAELDKLLVECNFPSICIHSGMSQEERLKRYKGFKEGHTRILVATDLVGRGIDIERVNIV
Sbjct: 301  AAELDKLLVECNFPSICIHSGMSQEERLKRYKGFKEGHTRILVATDLVGRGIDIERVNIV 360

Query: 1249 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSCATDVDVLNNVQSRFEVDIKQLPEQID 1428
            INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSC+TDVDVLNNVQSRFEVDIKQLPEQID
Sbjct: 361  INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSCSTDVDVLNNVQSRFEVDIKQLPEQID 420

Query: 1429 TSTYMPS 1449
            TSTYMPS
Sbjct: 421  TSTYMPS 427


>ref|XP_003526412.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like isoform 1
            [Glycine max] gi|356515450|ref|XP_003526413.1| PREDICTED:
            DEAD-box ATP-dependent RNA helicase 56-like isoform 2
            [Glycine max]
          Length = 427

 Score =  771 bits (1992), Expect = 0.0
 Identities = 390/427 (91%), Positives = 391/427 (91%)
 Frame = +1

Query: 169  MGETXXXXXXXXXXXXXXXXXXXPDSAGAKVNGEAAKKGYVGIHSSGFRDFLLKPELLRA 348
            MGET                   PDSAGAKVNGEA KKGYVGIHSSGFRDFLLKPELLRA
Sbjct: 1    MGETKDEAYEEELLDYEEEDEKAPDSAGAKVNGEATKKGYVGIHSSGFRDFLLKPELLRA 60

Query: 349  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVPGQVSALVL 528
            IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVPGQVSALVL
Sbjct: 61   IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVPGQVSALVL 120

Query: 529  CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKVHKDLLKNECPHIVVGTPGRILAL 708
            CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKVHKDLLKNECPHIVVGTPGRILAL
Sbjct: 121  CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKVHKDLLKNECPHIVVGTPGRILAL 180

Query: 709  ARDKDLSLKNVRHFILDECDKMLESLDMRKDVQDIFKMTPHDKQVMMFSATLSKEIRPVC 888
             RDKDLSLKNVRHFILDECDKMLESLDMRKDVQDIFKMTPHDKQVMMFSATLSKEIRPVC
Sbjct: 181  TRDKDLSLKNVRHFILDECDKMLESLDMRKDVQDIFKMTPHDKQVMMFSATLSKEIRPVC 240

Query: 889  KKFMQDPMEIYVDDEAKLTLHGLVQHYIXXXXXXXXXXXXXXXDALDFNQVVIFVKSVSR 1068
            KKFMQDPMEIYVDDEAKLTLHGLVQHYI               DALDFNQVVIFVKSVSR
Sbjct: 241  KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLKEEEKNRKLNDLLDALDFNQVVIFVKSVSR 300

Query: 1069 AAELDKLLVECNFPSICIHSGMSQEERLKRYKGFKEGHTRILVATDLVGRGIDIERVNIV 1248
            AAELDKLLVECNFPSICIHSGMSQEERLKRYKGFKEGHTRILVATDLVGRGIDIERVNIV
Sbjct: 301  AAELDKLLVECNFPSICIHSGMSQEERLKRYKGFKEGHTRILVATDLVGRGIDIERVNIV 360

Query: 1249 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSCATDVDVLNNVQSRFEVDIKQLPEQID 1428
            INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSC+TDVDVLNNVQSRFEVDIKQLPEQID
Sbjct: 361  INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSCSTDVDVLNNVQSRFEVDIKQLPEQID 420

Query: 1429 TSTYMPS 1449
            TSTYMPS
Sbjct: 421  TSTYMPS 427


>gb|AFV30230.1| ATP-dependent RNA helicase [Medicago sativa]
          Length = 427

 Score =  764 bits (1974), Expect = 0.0
 Identities = 385/427 (90%), Positives = 390/427 (91%)
 Frame = +1

Query: 169  MGETXXXXXXXXXXXXXXXXXXXPDSAGAKVNGEAAKKGYVGIHSSGFRDFLLKPELLRA 348
            MGET                   PDS GAKVNGE+ KKGYVGIHSSGFRDFLLKPELLRA
Sbjct: 1    MGETKEETYEEELLDYEEEDEKAPDSVGAKVNGESGKKGYVGIHSSGFRDFLLKPELLRA 60

Query: 349  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVPGQVSALVL 528
            IVDSGFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVLSTLQQIDPVPGQVSAL+L
Sbjct: 61   IVDSGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLSTLQQIDPVPGQVSALIL 120

Query: 529  CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKVHKDLLKNECPHIVVGTPGRILAL 708
            CHTRELAYQICHEFERFSTYL DLKVAVFYGGVNIKVHKDLLKNECPHIVVGTPGRILAL
Sbjct: 121  CHTRELAYQICHEFERFSTYLADLKVAVFYGGVNIKVHKDLLKNECPHIVVGTPGRILAL 180

Query: 709  ARDKDLSLKNVRHFILDECDKMLESLDMRKDVQDIFKMTPHDKQVMMFSATLSKEIRPVC 888
            ARDKDLSLKNVRHFILDECDKMLESLDMRKDVQDIFKMTPHDKQVMMFSATLSKEIRPVC
Sbjct: 181  ARDKDLSLKNVRHFILDECDKMLESLDMRKDVQDIFKMTPHDKQVMMFSATLSKEIRPVC 240

Query: 889  KKFMQDPMEIYVDDEAKLTLHGLVQHYIXXXXXXXXXXXXXXXDALDFNQVVIFVKSVSR 1068
            KKFMQDPMEIYVDDEAKLTLHGLVQHYI               DALDFNQVVIFVKSVSR
Sbjct: 241  KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLKEEEKNRKLYDLLDALDFNQVVIFVKSVSR 300

Query: 1069 AAELDKLLVECNFPSICIHSGMSQEERLKRYKGFKEGHTRILVATDLVGRGIDIERVNIV 1248
            AAELDKLLVECNFPSICIHSGMSQEERLKRYKGFKEGHTRILVATDLVGRGIDIERVNIV
Sbjct: 301  AAELDKLLVECNFPSICIHSGMSQEERLKRYKGFKEGHTRILVATDLVGRGIDIERVNIV 360

Query: 1249 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSCATDVDVLNNVQSRFEVDIKQLPEQID 1428
            INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSC++DVDVLNNVQSRFEVDIKQLPEQID
Sbjct: 361  INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSCSSDVDVLNNVQSRFEVDIKQLPEQID 420

Query: 1429 TSTYMPS 1449
            TSTYMPS
Sbjct: 421  TSTYMPS 427


>ref|XP_003588757.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
            gi|355477805|gb|AES59008.1| DEAD-box ATP-dependent RNA
            helicase [Medicago truncatula]
          Length = 427

 Score =  764 bits (1974), Expect = 0.0
 Identities = 385/427 (90%), Positives = 390/427 (91%)
 Frame = +1

Query: 169  MGETXXXXXXXXXXXXXXXXXXXPDSAGAKVNGEAAKKGYVGIHSSGFRDFLLKPELLRA 348
            MGET                   PDS GAKVNGE+ KKGYVGIHSSGFRDFLLKPELLRA
Sbjct: 1    MGETKEETYEEELLDYEEEDEKAPDSVGAKVNGESGKKGYVGIHSSGFRDFLLKPELLRA 60

Query: 349  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVPGQVSALVL 528
            IVDSGFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVLSTLQQIDPVPGQVSAL+L
Sbjct: 61   IVDSGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLSTLQQIDPVPGQVSALIL 120

Query: 529  CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKVHKDLLKNECPHIVVGTPGRILAL 708
            CHTRELAYQICHEFERFSTYL DLKVAVFYGGVNIKVHKDLLKNECPHIVVGTPGRILAL
Sbjct: 121  CHTRELAYQICHEFERFSTYLADLKVAVFYGGVNIKVHKDLLKNECPHIVVGTPGRILAL 180

Query: 709  ARDKDLSLKNVRHFILDECDKMLESLDMRKDVQDIFKMTPHDKQVMMFSATLSKEIRPVC 888
            ARDKDLSLKNVRHFILDECDKMLESLDMRKDVQDIFKMTPHDKQVMMFSATLSKEIRPVC
Sbjct: 181  ARDKDLSLKNVRHFILDECDKMLESLDMRKDVQDIFKMTPHDKQVMMFSATLSKEIRPVC 240

Query: 889  KKFMQDPMEIYVDDEAKLTLHGLVQHYIXXXXXXXXXXXXXXXDALDFNQVVIFVKSVSR 1068
            KKFMQDPMEIYVDDEAKLTLHGLVQHYI               DALDFNQVVIFVKSVSR
Sbjct: 241  KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLKEEEKNRKLNDLLDALDFNQVVIFVKSVSR 300

Query: 1069 AAELDKLLVECNFPSICIHSGMSQEERLKRYKGFKEGHTRILVATDLVGRGIDIERVNIV 1248
            AAELDKLLVECNFPSICIHSGMSQEERLKRYKGFKEGHTRILVATDLVGRGIDIERVNIV
Sbjct: 301  AAELDKLLVECNFPSICIHSGMSQEERLKRYKGFKEGHTRILVATDLVGRGIDIERVNIV 360

Query: 1249 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSCATDVDVLNNVQSRFEVDIKQLPEQID 1428
            INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSC++DVDVLNNVQSRFEVDIKQLPEQID
Sbjct: 361  INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSCSSDVDVLNNVQSRFEVDIKQLPEQID 420

Query: 1429 TSTYMPS 1449
            TSTYMPS
Sbjct: 421  TSTYMPS 427


>gb|AFK41905.1| unknown [Medicago truncatula]
          Length = 427

 Score =  759 bits (1959), Expect = 0.0
 Identities = 383/427 (89%), Positives = 388/427 (90%)
 Frame = +1

Query: 169  MGETXXXXXXXXXXXXXXXXXXXPDSAGAKVNGEAAKKGYVGIHSSGFRDFLLKPELLRA 348
            MGET                   PDS GAKVNGE+ KKGYVGIHSSGFRDFLLKPELLRA
Sbjct: 1    MGETKEETYEEELLDYEEEDEKAPDSVGAKVNGESGKKGYVGIHSSGFRDFLLKPELLRA 60

Query: 349  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVPGQVSALVL 528
            IVDSGFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVLSTLQQIDPVPGQVSAL+L
Sbjct: 61   IVDSGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLSTLQQIDPVPGQVSALIL 120

Query: 529  CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKVHKDLLKNECPHIVVGTPGRILAL 708
            CHTRELAYQICHEFE FSTYL DLKVAVFYGGVNIKVHKDLLKNECPHIVVGTPGRILAL
Sbjct: 121  CHTRELAYQICHEFEGFSTYLADLKVAVFYGGVNIKVHKDLLKNECPHIVVGTPGRILAL 180

Query: 709  ARDKDLSLKNVRHFILDECDKMLESLDMRKDVQDIFKMTPHDKQVMMFSATLSKEIRPVC 888
            ARDKDLSLKNVRHFILDECDKMLESLDMRKDVQDIFKMTP DKQVMMFSATLSKEIRPVC
Sbjct: 181  ARDKDLSLKNVRHFILDECDKMLESLDMRKDVQDIFKMTPRDKQVMMFSATLSKEIRPVC 240

Query: 889  KKFMQDPMEIYVDDEAKLTLHGLVQHYIXXXXXXXXXXXXXXXDALDFNQVVIFVKSVSR 1068
            KKFMQDPMEIYVDDEAKLTLHGLVQHYI               DALDFNQVVIFVKSVSR
Sbjct: 241  KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLKEEEKNRKLNDLLDALDFNQVVIFVKSVSR 300

Query: 1069 AAELDKLLVECNFPSICIHSGMSQEERLKRYKGFKEGHTRILVATDLVGRGIDIERVNIV 1248
            AAELDKLLVECNFPSICIHSGMSQEERLKRYKGFKEGHTRILVATDLVGRGIDIERVNIV
Sbjct: 301  AAELDKLLVECNFPSICIHSGMSQEERLKRYKGFKEGHTRILVATDLVGRGIDIERVNIV 360

Query: 1249 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSCATDVDVLNNVQSRFEVDIKQLPEQID 1428
            INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSC++DVDVLNNVQSRFEVDIKQLPEQID
Sbjct: 361  INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSCSSDVDVLNNVQSRFEVDIKQLPEQID 420

Query: 1429 TSTYMPS 1449
            TSTYMPS
Sbjct: 421  TSTYMPS 427


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