BLASTX nr result

ID: Glycyrrhiza24_contig00001883 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00001883
         (849 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003594628.1| YTH domain family protein [Medicago truncatu...    69   1e-09
ref|XP_003550796.1| PREDICTED: uncharacterized protein LOC100818...    65   1e-08
ref|XP_003528595.1| PREDICTED: uncharacterized protein LOC100777...    64   4e-08
ref|XP_003609844.1| YTH domain family protein [Medicago truncatu...    59   1e-06

>ref|XP_003594628.1| YTH domain family protein [Medicago truncatula]
           gi|355483676|gb|AES64879.1| YTH domain family protein
           [Medicago truncatula]
          Length = 658

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 38/71 (53%), Positives = 44/71 (61%)
 Frame = +2

Query: 2   SVTITPKQVETKQSSIANKEPIXXXXXXXXXXXXXXFAESSGFLKVGSIPLDAKALQPEK 181
           S+ ITPKQV TKQS I ++E I               A SSGFLKVGSI LD KALQP+K
Sbjct: 588 SIAITPKQVATKQSGIGSREQIDILTVGSVPVKVNGLAGSSGFLKVGSIQLDPKALQPQK 647

Query: 182 EDAAVKTGSQR 214
            DAA K+  Q+
Sbjct: 648 GDAAAKSSFQK 658


>ref|XP_003550796.1| PREDICTED: uncharacterized protein LOC100818167 [Glycine max]
          Length = 691

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 39/71 (54%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
 Frame = +2

Query: 2   SVTITPKQVETKQS--SIANKEPIXXXXXXXXXXXXXXFAESSGFLKVGSIPLDAKALQP 175
           SVTITPKQVETK S  S+ANKEP+              FAESSGFLK+G+IPLD + LQ 
Sbjct: 622 SVTITPKQVETKPSGISVANKEPLDVITVGSMQIRVNGFAESSGFLKIGTIPLDPRTLQL 681

Query: 176 EKEDAAVKTGS 208
           +   + VK GS
Sbjct: 682 D-GGSRVKNGS 691


>ref|XP_003528595.1| PREDICTED: uncharacterized protein LOC100777489 [Glycine max]
          Length = 753

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 39/71 (54%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
 Frame = +2

Query: 2   SVTITPKQVETKQS--SIANKEPIXXXXXXXXXXXXXXFAESSGFLKVGSIPLDAKALQP 175
           SVTITPKQVETK S  S+ANKEP+              FAESSG LK+GSIPLD + LQ 
Sbjct: 684 SVTITPKQVETKPSGISVANKEPLDVITVGSMQVKVNGFAESSGLLKIGSIPLDPRTLQL 743

Query: 176 EKEDAAVKTGS 208
           +     VK GS
Sbjct: 744 D-GGTRVKNGS 753


>ref|XP_003609844.1| YTH domain family protein [Medicago truncatula]
           gi|355510899|gb|AES92041.1| YTH domain family protein
           [Medicago truncatula]
          Length = 651

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 35/67 (52%), Positives = 40/67 (59%)
 Frame = +2

Query: 2   SVTITPKQVETKQSSIANKEPIXXXXXXXXXXXXXXFAESSGFLKVGSIPLDAKALQPEK 181
           SVTITP+QVETK S   N EPI              F+ESSG LKVGSIPLD ++LQ  K
Sbjct: 588 SVTITPRQVETKPS---NTEPIDVVTVGSMQVRVNGFSESSGVLKVGSIPLDPRSLQAGK 644

Query: 182 EDAAVKT 202
               +KT
Sbjct: 645 GTTYIKT 651


Top