BLASTX nr result

ID: Glycyrrhiza24_contig00001881 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00001881
         (1329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK40674.1| unknown [Lotus japonicus]                              406   e-111
ref|XP_003538726.1| PREDICTED: thylakoid lumenal protein At1g122...   398   e-108
ref|XP_003611267.1| Thylakoid lumenal protein [Medicago truncatu...   389   e-106
ref|XP_003611268.1| Thylakoid lumenal protein [Medicago truncatu...   369   e-100
ref|XP_002265958.2| PREDICTED: uncharacterized protein LOC100250...   366   8e-99

>gb|AFK40674.1| unknown [Lotus japonicus]
          Length = 273

 Score =  406 bits (1043), Expect = e-111
 Identities = 207/248 (83%), Positives = 224/248 (90%), Gaps = 1/248 (0%)
 Frame = +3

Query: 309  SSKISNIPHVHSKSSPVV-CQMNSDRDHHPQDSRKWGKLVSATLAAAVIAFSSDMSALAD 485
            +S++SN  H H KSSP+V CQMNS+RDH PQ+S+KWGKLVSATLAAAVIAFSSDMSALAD
Sbjct: 24   TSELSNSLHFHPKSSPIVLCQMNSNRDH-PQESKKWGKLVSATLAAAVIAFSSDMSALAD 82

Query: 486  LNKYEAELRGEFGIGSAAQFGSADLRKAVHVNENFRRANFTAADMRESDFSGSTFNGAYL 665
            LNK+EAE+RGEFGIGSAAQFGSADLRKAVHVNENFRRANFT+ADMRESDFSGSTFNGAYL
Sbjct: 83   LNKFEAEIRGEFGIGSAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGSTFNGAYL 142

Query: 666  EKAVAYKANFTGADLSDTLMDRMVLNEANLTNAILARTVLTRSDLGGAVIEGADFSDAVL 845
            EKAVAYKANF+GADLSDTLMDRMVLNEANLTNAIL RTVLTRSDLGG++IEGADFSDAVL
Sbjct: 143  EKAVAYKANFSGADLSDTLMDRMVLNEANLTNAILVRTVLTRSDLGGSIIEGADFSDAVL 202

Query: 846  DLPQKQALCKYASGTNPVTGVSTRLSLGCGNKRRNAYGXXXXXXXXXXXXXXXDRDGFCD 1025
            DL QK ALCKYASGTNPVTGVSTR+SLGCGNKRRNAYG               +RDGFCD
Sbjct: 203  DLTQKLALCKYASGTNPVTGVSTRVSLGCGNKRRNAYGTPSSPLLSAPPQKLLNRDGFCD 262

Query: 1026 DATGLCDA 1049
            +ATGLCD+
Sbjct: 263  EATGLCDS 270


>ref|XP_003538726.1| PREDICTED: thylakoid lumenal protein At1g12250, chloroplastic-like
            [Glycine max]
          Length = 260

 Score =  398 bits (1022), Expect = e-108
 Identities = 207/249 (83%), Positives = 217/249 (87%)
 Frame = +3

Query: 306  SSSKISNIPHVHSKSSPVVCQMNSDRDHHPQDSRKWGKLVSATLAAAVIAFSSDMSALAD 485
            SSS  S I H HSKS PVV +  ++ +     S KWGK+VSATLAAAVIAFSSDMSALAD
Sbjct: 17   SSSSTSKISHSHSKSFPVVVKSVANAE-----STKWGKVVSATLAAAVIAFSSDMSALAD 71

Query: 486  LNKYEAELRGEFGIGSAAQFGSADLRKAVHVNENFRRANFTAADMRESDFSGSTFNGAYL 665
            LNK+EAE+RGEFGIGSAAQFGSADLRKAVHVNENFRRANFTAADMRESDFSGSTFNGAYL
Sbjct: 72   LNKFEAEMRGEFGIGSAAQFGSADLRKAVHVNENFRRANFTAADMRESDFSGSTFNGAYL 131

Query: 666  EKAVAYKANFTGADLSDTLMDRMVLNEANLTNAILARTVLTRSDLGGAVIEGADFSDAVL 845
            EKAVAYKANF+GADLSDTLMDRMVLNEANLTNAIL RTVLTRSDLGGA+IEGADFSDAVL
Sbjct: 132  EKAVAYKANFSGADLSDTLMDRMVLNEANLTNAILLRTVLTRSDLGGAIIEGADFSDAVL 191

Query: 846  DLPQKQALCKYASGTNPVTGVSTRLSLGCGNKRRNAYGXXXXXXXXXXXXXXXDRDGFCD 1025
            DLPQKQALCKYASGTNPVTGVSTR+SLGCGNKRRNAYG               DRDGFCD
Sbjct: 192  DLPQKQALCKYASGTNPVTGVSTRVSLGCGNKRRNAYGSPSSPLLSAPPQKLLDRDGFCD 251

Query: 1026 DATGLCDAK 1052
            DATGLCDAK
Sbjct: 252  DATGLCDAK 260


>ref|XP_003611267.1| Thylakoid lumenal protein [Medicago truncatula]
            gi|355512602|gb|AES94225.1| Thylakoid lumenal protein
            [Medicago truncatula]
          Length = 262

 Score =  389 bits (999), Expect = e-106
 Identities = 197/249 (79%), Positives = 217/249 (87%)
 Frame = +3

Query: 306  SSSKISNIPHVHSKSSPVVCQMNSDRDHHPQDSRKWGKLVSATLAAAVIAFSSDMSALAD 485
            SSSK+S       KSS V+C+M+ + DH  + ++ WGKLVSATLAAAVI FSSDMSALAD
Sbjct: 21   SSSKVS-------KSSQVICKMSLNNDHPQESNKNWGKLVSATLAAAVIVFSSDMSALAD 73

Query: 486  LNKYEAELRGEFGIGSAAQFGSADLRKAVHVNENFRRANFTAADMRESDFSGSTFNGAYL 665
            LNK+EAE+RGEFGIGSAAQFGSADL+K VHVNENFRRANFT+ADMRESDFSGSTFNGAY+
Sbjct: 74   LNKFEAEVRGEFGIGSAAQFGSADLKKTVHVNENFRRANFTSADMRESDFSGSTFNGAYM 133

Query: 666  EKAVAYKANFTGADLSDTLMDRMVLNEANLTNAILARTVLTRSDLGGAVIEGADFSDAVL 845
            EKAVA+KANFTGADLSDTLMDRMVLNEANLTNAIL+RTVLTRSDLGGA+IEGADFSDAVL
Sbjct: 134  EKAVAFKANFTGADLSDTLMDRMVLNEANLTNAILSRTVLTRSDLGGAIIEGADFSDAVL 193

Query: 846  DLPQKQALCKYASGTNPVTGVSTRLSLGCGNKRRNAYGXXXXXXXXXXXXXXXDRDGFCD 1025
            DLPQK ALCKYASGTNPVTGVSTR+SLGCGNKRRNAYG               DRDGFCD
Sbjct: 194  DLPQKLALCKYASGTNPVTGVSTRVSLGCGNKRRNAYGTPSSPLLSAPPQKLLDRDGFCD 253

Query: 1026 DATGLCDAK 1052
            +A+GLCD+K
Sbjct: 254  EASGLCDSK 262


>ref|XP_003611268.1| Thylakoid lumenal protein [Medicago truncatula]
            gi|355512603|gb|AES94226.1| Thylakoid lumenal protein
            [Medicago truncatula]
          Length = 232

 Score =  369 bits (948), Expect = e-100
 Identities = 184/219 (84%), Positives = 199/219 (90%)
 Frame = +3

Query: 396  QDSRKWGKLVSATLAAAVIAFSSDMSALADLNKYEAELRGEFGIGSAAQFGSADLRKAVH 575
            + ++ WGKLVSATLAAAVI FSSDMSALADLNK+EAE+RGEFGIGSAAQFGSADL+K VH
Sbjct: 14   ESNKNWGKLVSATLAAAVIVFSSDMSALADLNKFEAEVRGEFGIGSAAQFGSADLKKTVH 73

Query: 576  VNENFRRANFTAADMRESDFSGSTFNGAYLEKAVAYKANFTGADLSDTLMDRMVLNEANL 755
            VNENFRRANFT+ADMRESDFSGSTFNGAY+EKAVA+KANFTGADLSDTLMDRMVLNEANL
Sbjct: 74   VNENFRRANFTSADMRESDFSGSTFNGAYMEKAVAFKANFTGADLSDTLMDRMVLNEANL 133

Query: 756  TNAILARTVLTRSDLGGAVIEGADFSDAVLDLPQKQALCKYASGTNPVTGVSTRLSLGCG 935
            TNAIL+RTVLTRSDLGGA+IEGADFSDAVLDLPQK ALCKYASGTNPVTGVSTR+SLGCG
Sbjct: 134  TNAILSRTVLTRSDLGGAIIEGADFSDAVLDLPQKLALCKYASGTNPVTGVSTRVSLGCG 193

Query: 936  NKRRNAYGXXXXXXXXXXXXXXXDRDGFCDDATGLCDAK 1052
            NKRRNAYG               DRDGFCD+A+GLCD+K
Sbjct: 194  NKRRNAYGTPSSPLLSAPPQKLLDRDGFCDEASGLCDSK 232


>ref|XP_002265958.2| PREDICTED: uncharacterized protein LOC100250522 isoform 2 [Vitis
            vinifera]
          Length = 596

 Score =  366 bits (939), Expect = 8e-99
 Identities = 191/251 (76%), Positives = 208/251 (82%), Gaps = 6/251 (2%)
 Frame = +3

Query: 318  ISNIP-HVHSKSSP--VVCQMNSDRDHHPQ---DSRKWGKLVSATLAAAVIAFSSDMSAL 479
            IS  P H+ S S P  VVC++   R ++ +   +S+KW +LVS  LAAAV+  S  M A+
Sbjct: 346  ISKSPNHLQSPSKPFTVVCRIELQRGNYCRANAESKKWQRLVSTALAAAVVTLSPVMPAV 405

Query: 480  ADLNKYEAELRGEFGIGSAAQFGSADLRKAVHVNENFRRANFTAADMRESDFSGSTFNGA 659
            ADLNKYEAE RGEFGIGSAAQFGSADLRKAVHVNENFRRANFT+ADMRESDFSGSTFNGA
Sbjct: 406  ADLNKYEAETRGEFGIGSAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGSTFNGA 465

Query: 660  YLEKAVAYKANFTGADLSDTLMDRMVLNEANLTNAILARTVLTRSDLGGAVIEGADFSDA 839
            YLEKAVAYKANFTGADLSDTLMDRMVLNEANLTNA+LARTVLTRSDLGGAVIEGADFSDA
Sbjct: 466  YLEKAVAYKANFTGADLSDTLMDRMVLNEANLTNAVLARTVLTRSDLGGAVIEGADFSDA 525

Query: 840  VLDLPQKQALCKYASGTNPVTGVSTRLSLGCGNKRRNAYGXXXXXXXXXXXXXXXDRDGF 1019
            V+DLPQKQALCKYASGTNP+TGVSTR SLGCGN RR+AYG               DRDGF
Sbjct: 526  VIDLPQKQALCKYASGTNPITGVSTRASLGCGNSRRSAYGSPSSPLLSAPPPKLLDRDGF 585

Query: 1020 CDDATGLCDAK 1052
            CD+ TGLCDAK
Sbjct: 586  CDEGTGLCDAK 596



 Score =  177 bits (449), Expect = 5e-42
 Identities = 117/225 (52%), Positives = 139/225 (61%), Gaps = 14/225 (6%)
 Frame = +3

Query: 318 ISNIP-HVHSKSSP--VVCQMNSDRDHHPQ-----DSRKWGKLVSATLAAAVIAFSSDMS 473
           IS  P H+ S S P  VVC++   R+++ +     +S+KW +LVS  LAAAV+  S  M 
Sbjct: 11  ISKSPNHLRSLSKPFTVVCRIERQRENNWRGEANAESKKWQRLVSTALAAAVVTLSPVMP 70

Query: 474 ALADLNKYEAELRGEFGIGSAAQFGSADLRKAVHVNENFRRANFTAADMRESDFSGSTFN 653
           A+ADLNKYE E RGEFGIGSAAQFGSADLRKAVHVNENFRRANFT+ADMRESDFSGSTFN
Sbjct: 71  AVADLNKYEVETRGEFGIGSAAQFGSADLRKAVHVNENFRRANFTSADMRESDFSGSTFN 130

Query: 654 GAYLEKAVAYKANFTGADLSDTLMDRMVLNEANLTNAILARTVLTRSDLGGAVIEGADFS 833
           G YLEKAVAYKA+ TG D       +MVL+ +  T   + R  L+     G   E    S
Sbjct: 131 GEYLEKAVAYKASLTGPDAPHARPYKMVLHPS--TGLCVLRGSLSEPLKLGPCTE----S 184

Query: 834 DAVLDLPQK------QALCKYASGTNPVTGVSTRLSLGCGNKRRN 950
           +A    PQK        LC  A G     G   +LS+ C N   N
Sbjct: 185 EAWGYTPQKILIIKGTYLCLQAVG----LGKPAKLSVICSNPGSN 225


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