BLASTX nr result

ID: Glycyrrhiza24_contig00001855 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00001855
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21000.3| unnamed protein product [Vitis vinifera]              198   4e-49
ref|XP_003603437.1| GTP-binding nuclear protein Ran-A1 [Medicago...   197   6e-49
emb|CBI36254.3| unnamed protein product [Vitis vinifera]              196   2e-48
gb|ABB02641.1| unknown [Solanum tuberosum]                            196   2e-48
ref|NP_001234016.1| GTP-binding nuclear protein Ran1 [Solanum ly...   196   2e-48

>emb|CBI21000.3| unnamed protein product [Vitis vinifera]
          Length = 254

 Score =  198 bits (503), Expect = 4e-49
 Identities = 90/90 (100%), Positives = 90/90 (100%)
 Frame = +3

Query: 117 NMALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNC 296
           NMALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNC
Sbjct: 33  NMALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNC 92

Query: 297 GKIRFYCWDTAGQEKFGGLRDGYYIHGQCA 386
           GKIRFYCWDTAGQEKFGGLRDGYYIHGQCA
Sbjct: 93  GKIRFYCWDTAGQEKFGGLRDGYYIHGQCA 122


>ref|XP_003603437.1| GTP-binding nuclear protein Ran-A1 [Medicago truncatula]
           gi|355492485|gb|AES73688.1| GTP-binding nuclear protein
           Ran-A1 [Medicago truncatula]
          Length = 778

 Score =  197 bits (502), Expect = 6e-49
 Identities = 91/93 (97%), Positives = 91/93 (97%)
 Frame = +3

Query: 108 IPQNMALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFF 287
           IP  MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFF
Sbjct: 554 IPFIMALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFF 613

Query: 288 TNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCA 386
           TNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCA
Sbjct: 614 TNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCA 646



 Score =  196 bits (497), Expect = 2e-48
 Identities = 89/89 (100%), Positives = 89/89 (100%)
 Frame = +3

Query: 120 MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 299
           MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 300 KIRFYCWDTAGQEKFGGLRDGYYIHGQCA 386
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCA
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCA 89



 Score =  194 bits (494), Expect = 5e-48
 Identities = 88/89 (98%), Positives = 89/89 (100%)
 Frame = +3

Query: 120 MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 299
           +ALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 277 LALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 336

Query: 300 KIRFYCWDTAGQEKFGGLRDGYYIHGQCA 386
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCA
Sbjct: 337 KIRFYCWDTAGQEKFGGLRDGYYIHGQCA 365


>emb|CBI36254.3| unnamed protein product [Vitis vinifera]
          Length = 267

 Score =  196 bits (498), Expect = 2e-48
 Identities = 89/90 (98%), Positives = 90/90 (100%)
 Frame = +3

Query: 117 NMALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNC 296
           +MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNC
Sbjct: 46  HMALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNC 105

Query: 297 GKIRFYCWDTAGQEKFGGLRDGYYIHGQCA 386
           GKIRFYCWDTAGQEKFGGLRDGYYIHGQCA
Sbjct: 106 GKIRFYCWDTAGQEKFGGLRDGYYIHGQCA 135


>gb|ABB02641.1| unknown [Solanum tuberosum]
          Length = 221

 Score =  196 bits (497), Expect = 2e-48
 Identities = 89/89 (100%), Positives = 89/89 (100%)
 Frame = +3

Query: 120 MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 299
           MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 300 KIRFYCWDTAGQEKFGGLRDGYYIHGQCA 386
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCA
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCA 89


>ref|NP_001234016.1| GTP-binding nuclear protein Ran1 [Solanum lycopersicum]
           gi|585777|sp|P38546.1|RAN1_SOLLC RecName:
           Full=GTP-binding nuclear protein Ran1; AltName:
           Full=Ras-related nuclear protein 1
           gi|453561|gb|AAC37402.1| Ran protein/TC4 protein
           [Solanum lycopersicum] gi|77745509|gb|ABB02653.1|
           Ran/TC4-like protein [Solanum tuberosum]
           gi|82623375|gb|ABB87102.1| Ran protein/TC4 protein-like
           [Solanum tuberosum]
          Length = 221

 Score =  196 bits (497), Expect = 2e-48
 Identities = 89/89 (100%), Positives = 89/89 (100%)
 Frame = +3

Query: 120 MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 299
           MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 300 KIRFYCWDTAGQEKFGGLRDGYYIHGQCA 386
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCA
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCA 89


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