BLASTX nr result

ID: Glycyrrhiza24_contig00001852 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00001852
         (686 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003599950.1| hypothetical protein MTR_3g049490 [Medicago ...    78   1e-12
ref|XP_003624492.1| Pentatricopeptide repeat-containing protein ...    72   1e-10

>ref|XP_003599950.1| hypothetical protein MTR_3g049490 [Medicago truncatula]
           gi|355488998|gb|AES70201.1| hypothetical protein
           MTR_3g049490 [Medicago truncatula]
          Length = 228

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 41/66 (62%), Positives = 46/66 (69%), Gaps = 4/66 (6%)
 Frame = -2

Query: 661 RRAPGRPKKQRRKANDELRNPHRISQQAK----TKRCKRCGKLGHNSRTCKGKTAADRVI 494
           RRAPGRPKK RRK NDE   P   S++ K    T RC+RC +LGHN+RTC GKT ADR I
Sbjct: 65  RRAPGRPKKARRKENDE---PKTASKKGKRNQVTLRCRRCKELGHNTRTCGGKTGADRRI 121

Query: 493 AKGGNK 476
             GGNK
Sbjct: 122 PVGGNK 127


>ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355499507|gb|AES80710.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 32/52 (61%), Positives = 37/52 (71%)
 Frame = -2

Query: 631  RRKANDELRNPHRISQQAKTKRCKRCGKLGHNSRTCKGKTAADRVIAKGGNK 476
            R KAN E  NPH++        CKRCG++GHN+R CKGKTAADR I KGGNK
Sbjct: 1041 RNKANGEPCNPHKLPIYHTALGCKRCGRVGHNNRICKGKTAADRAICKGGNK 1092


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