BLASTX nr result

ID: Glycyrrhiza24_contig00001834 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00001834
         (1183 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612246.1| RING-H2 finger protein ATL4M [Medicago trunc...   390   e-106
ref|NP_001237678.1| uncharacterized protein LOC100306109 [Glycin...   384   e-104
gb|AFK36061.1| unknown [Lotus japonicus]                              383   e-104
ref|XP_003517156.1| PREDICTED: LOW QUALITY PROTEIN: NEP1-interac...   383   e-104
ref|XP_002530631.1| RING-H2 finger protein ATL4M, putative [Rici...   357   2e-96

>ref|XP_003612246.1| RING-H2 finger protein ATL4M [Medicago truncatula]
            gi|355513581|gb|AES95204.1| RING-H2 finger protein ATL4M
            [Medicago truncatula] gi|388507050|gb|AFK41591.1| unknown
            [Medicago truncatula]
          Length = 234

 Score =  390 bits (1001), Expect = e-106
 Identities = 199/235 (84%), Positives = 212/235 (90%)
 Frame = -3

Query: 1001 MEFVPNPCPLRSSMFGSFGNLVERVKQIGTLAVAAVIGNIFSAILTFCFALVGTLLGAMT 822
            M+FVPNPCP RSS+FGSFGN V++VKQ GTLA++ +IGNIFSAILTFCFALVGTLLGA+T
Sbjct: 1    MDFVPNPCPSRSSLFGSFGNFVDKVKQFGTLAISVIIGNIFSAILTFCFALVGTLLGALT 60

Query: 821  GALIGQETESGFIRGAAVGAISGAVFSIEVFESSLVLWHSDESGIGCLLYLIDVIASLLN 642
            GALIGQETESGFIRGAAVGAISGAVFSIEVFESSLVLWHSDESGIGCLLYLIDVI SLL+
Sbjct: 61   GALIGQETESGFIRGAAVGAISGAVFSIEVFESSLVLWHSDESGIGCLLYLIDVIVSLLS 120

Query: 641  GRLVRERIGPAMLSAVQSQMGAVESSFDEVQNIFDTGGSKGLSGDSVEKIPIIKITGDNN 462
            GRLVRERIGPAMLSAVQSQMGAVE+SFDEVQNIFD GGSKGLS DSV KIP IKIT D N
Sbjct: 121  GRLVRERIGPAMLSAVQSQMGAVETSFDEVQNIFDIGGSKGLSVDSVSKIPKIKITAD-N 179

Query: 461  VDASGEKVSCSVCLQDFQLGETVRSXXXXXXXXXXXCIDKWLIRHGSCPLCRRDL 297
            ++ASGEKVSCSVCLQDFQLGETVRS           CID WL+RHGSCPLCRRDL
Sbjct: 180  IEASGEKVSCSVCLQDFQLGETVRSLPHCHHMFHLPCIDMWLLRHGSCPLCRRDL 234


>ref|NP_001237678.1| uncharacterized protein LOC100306109 [Glycine max]
            gi|255627575|gb|ACU14132.1| unknown [Glycine max]
          Length = 242

 Score =  384 bits (986), Expect = e-104
 Identities = 202/244 (82%), Positives = 213/244 (87%)
 Frame = -3

Query: 1001 MEFVPNPCPLRSSMFGSFGNLVERVKQIGTLAVAAVIGNIFSAILTFCFALVGTLLGAMT 822
            M+F  NPCPLRSS   +F N VERVKQ+GTLA +AVIGNIFSAILTFCFALVGTLLGA+T
Sbjct: 1    MDFALNPCPLRSS---TFVNFVERVKQLGTLAFSAVIGNIFSAILTFCFALVGTLLGALT 57

Query: 821  GALIGQETESGFIRGAAVGAISGAVFSIEVFESSLVLWHSDESGIGCLLYLIDVIASLLN 642
            GALIGQETESGFIRGAAVGAISGAVFSIEVFESSLVLW SDESGIGC+LYLIDVIASLL+
Sbjct: 58   GALIGQETESGFIRGAAVGAISGAVFSIEVFESSLVLWQSDESGIGCVLYLIDVIASLLS 117

Query: 641  GRLVRERIGPAMLSAVQSQMGAVESSFDEVQNIFDTGGSKGLSGDSVEKIPIIKITGDNN 462
            GRLVRERIGPAMLSAVQSQMGAVE+SFDEVQNIFDTGGSKGLSGD VEKIP IKIT DNN
Sbjct: 118  GRLVRERIGPAMLSAVQSQMGAVEASFDEVQNIFDTGGSKGLSGDLVEKIPKIKITTDNN 177

Query: 461  VDASGEKVSCSVCLQDFQLGETVRSXXXXXXXXXXXCIDKWLIRHGSCPLCRRDL*FLYM 282
             DASG++VSCSVCLQDF LGETVRS           CIDKWL RHGSCPLCR+    LYM
Sbjct: 178  FDASGDRVSCSVCLQDFMLGETVRSLPHCHHMFHLPCIDKWLFRHGSCPLCRKGSVILYM 237

Query: 281  HSTD 270
             STD
Sbjct: 238  LSTD 241


>gb|AFK36061.1| unknown [Lotus japonicus]
          Length = 237

 Score =  383 bits (984), Expect = e-104
 Identities = 198/237 (83%), Positives = 210/237 (88%), Gaps = 2/237 (0%)
 Frame = -3

Query: 1001 MEFVPNPCPLRSSMFGSFGNLVERVKQIGTLAVAAVIGNIFSAILTFCFALVGTLLGAMT 822
            M+F+PNP P R S+FGSFGNLV++VKQI  LA++A+IGNI SAILTFCFALVGTLLG MT
Sbjct: 1    MDFLPNPSPSRPSLFGSFGNLVDKVKQICNLAISAIIGNILSAILTFCFALVGTLLGVMT 60

Query: 821  GALIGQETESGFIRGAAVGAISGAVFSIEVFESSLVLWHSDESGIGCLLYLIDVIASLLN 642
            GALIGQETESGFIRGAAVGAIS AVFSIEVFESSLVLWHSDESGIGCLLYLIDVI SLL+
Sbjct: 61   GALIGQETESGFIRGAAVGAISRAVFSIEVFESSLVLWHSDESGIGCLLYLIDVIGSLLS 120

Query: 641  GRLVRERIGPAMLSAVQSQMGAVESSFDEVQNIFDT--GGSKGLSGDSVEKIPIIKITGD 468
            GRLVRERIGPAMLSAVQSQMGAVE+ FDEVQNIFDT  GG+KGLSGDSVEKIP IKIT D
Sbjct: 121  GRLVRERIGPAMLSAVQSQMGAVETGFDEVQNIFDTGCGGAKGLSGDSVEKIPKIKITTD 180

Query: 467  NNVDASGEKVSCSVCLQDFQLGETVRSXXXXXXXXXXXCIDKWLIRHGSCPLCRRDL 297
            NN DASGE+VSCSVCLQDFQLGETVRS           CIDKWL RHGSCPLCRRDL
Sbjct: 181  NNADASGERVSCSVCLQDFQLGETVRSLPHCHHMFHLPCIDKWLFRHGSCPLCRRDL 237


>ref|XP_003517156.1| PREDICTED: LOW QUALITY PROTEIN: NEP1-interacting protein 1-like
            [Glycine max]
          Length = 256

 Score =  383 bits (983), Expect = e-104
 Identities = 199/240 (82%), Positives = 211/240 (87%)
 Frame = -3

Query: 1001 MEFVPNPCPLRSSMFGSFGNLVERVKQIGTLAVAAVIGNIFSAILTFCFALVGTLLGAMT 822
            M+F PNPCPLRSS   SF NLVER+KQ+GTLAV+AVIGNIFSAILTFCFALVGTLLGA+T
Sbjct: 1    MDFAPNPCPLRSS---SFVNLVERIKQLGTLAVSAVIGNIFSAILTFCFALVGTLLGALT 57

Query: 821  GALIGQETESGFIRGAAVGAISGAVFSIEVFESSLVLWHSDESGIGCLLYLIDVIASLLN 642
            GALIGQETESGFIRGAAVGAISGAVFSIEVFESSLVLW SDESGIGC+LYLIDVI SLL+
Sbjct: 58   GALIGQETESGFIRGAAVGAISGAVFSIEVFESSLVLWQSDESGIGCVLYLIDVIVSLLS 117

Query: 641  GRLVRERIGPAMLSAVQSQMGAVESSFDEVQNIFDTGGSKGLSGDSVEKIPIIKITGDNN 462
            GRLVRERIGPAM SAVQSQMGAVE+SFDEVQNIFDTGGSKGLSGD V+KIP IKIT DNN
Sbjct: 118  GRLVRERIGPAMFSAVQSQMGAVETSFDEVQNIFDTGGSKGLSGDLVDKIPKIKITTDNN 177

Query: 461  VDASGEKVSCSVCLQDFQLGETVRSXXXXXXXXXXXCIDKWLIRHGSCPLCRRDL*FLYM 282
            VDASG++VSCSVCLQDF LGETVRS           CIDKWL RHGSCPLC +    LYM
Sbjct: 178  VDASGDRVSCSVCLQDFMLGETVRSLPHCHHMFHLPCIDKWLFRHGSCPLCXKGSVILYM 237


>ref|XP_002530631.1| RING-H2 finger protein ATL4M, putative [Ricinus communis]
            gi|223529804|gb|EEF31739.1| RING-H2 finger protein ATL4M,
            putative [Ricinus communis]
          Length = 235

 Score =  357 bits (917), Expect = 2e-96
 Identities = 183/235 (77%), Positives = 202/235 (85%)
 Frame = -3

Query: 1001 MEFVPNPCPLRSSMFGSFGNLVERVKQIGTLAVAAVIGNIFSAILTFCFALVGTLLGAMT 822
            MEF P P     S    FG+ VE++K++   AV+AVIGNIFSAI TF FALVGTLLGAMT
Sbjct: 1    MEFYPYPSRFSMSSLPFFGDFVEKIKEVCNFAVSAVIGNIFSAIFTFFFALVGTLLGAMT 60

Query: 821  GALIGQETESGFIRGAAVGAISGAVFSIEVFESSLVLWHSDESGIGCLLYLIDVIASLLN 642
            GALIGQETESGF+RGAAVGAISGAVFSIEVFESSL+LW SDESGIGCLLYLIDVIASLL+
Sbjct: 61   GALIGQETESGFVRGAAVGAISGAVFSIEVFESSLLLWQSDESGIGCLLYLIDVIASLLS 120

Query: 641  GRLVRERIGPAMLSAVQSQMGAVESSFDEVQNIFDTGGSKGLSGDSVEKIPIIKITGDNN 462
            GRLVRERIGPAMLSAVQSQMGAVE+SF+EVQNIFDTGG+KGL+GD+VEKIP IKIT +N 
Sbjct: 121  GRLVRERIGPAMLSAVQSQMGAVETSFEEVQNIFDTGGAKGLTGDTVEKIPKIKITSNNT 180

Query: 461  VDASGEKVSCSVCLQDFQLGETVRSXXXXXXXXXXXCIDKWLIRHGSCPLCRRDL 297
            +DASGEKV+CSVCLQDFQ+GETVRS           CIDKWL+RH SCPLCRRDL
Sbjct: 181  IDASGEKVACSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLLRHASCPLCRRDL 235


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