BLASTX nr result
ID: Glycyrrhiza24_contig00001833
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00001833
(3689 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003609507.1| 116 kDa U5 small nuclear ribonucleoprotein c... 1815 0.0
ref|XP_003549705.1| PREDICTED: 116 kDa U5 small nuclear ribonucl... 1807 0.0
ref|XP_003542669.1| PREDICTED: 116 kDa U5 small nuclear ribonucl... 1801 0.0
ref|XP_002267199.1| PREDICTED: 116 kDa U5 small nuclear ribonucl... 1765 0.0
ref|XP_004139267.1| PREDICTED: 116 kDa U5 small nuclear ribonucl... 1761 0.0
>ref|XP_003609507.1| 116 kDa U5 small nuclear ribonucleoprotein component [Medicago
truncatula] gi|355510562|gb|AES91704.1| 116 kDa U5 small
nuclear ribonucleoprotein component [Medicago truncatula]
Length = 983
Score = 1815 bits (4702), Expect = 0.0
Identities = 907/989 (91%), Positives = 937/989 (94%)
Frame = -1
Query: 3578 MDDSLYDEFGNYIGPEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGHANGWMTTGDTT 3399
MDDSLYDEFGNYIGPEI EG +NGW+TT T
Sbjct: 1 MDDSLYDEFGNYIGPEIESDLDSDGDDPSDRDEPNEEDDRAAQSDGEGPSNGWLTT-TTD 59
Query: 3398 DVEMVDNQVVLAEDKKYYPTAEEVYGDDVETLVMDEDEQPLEMPIIKPVKNMKFEVGVKD 3219
D++ ++NQ+VLAEDKKYYPTAEEVYG+DVETLVMDED+QPLE PIIKPVKN KFEVGVKD
Sbjct: 60 DMDTLENQIVLAEDKKYYPTAEEVYGEDVETLVMDEDDQPLEQPIIKPVKNKKFEVGVKD 119
Query: 3218 SSTYVSSQFLLGLMSNPSLARNVALVGHLQHGKTVFMDMLVEQTHHMSTFDPQSEKHMRY 3039
SSTYVSSQF+LGLMSNPSL+RNVALVGHLQHGKTVFMDMLVEQTHHM+TFD QSEKHMRY
Sbjct: 120 SSTYVSSQFMLGLMSNPSLSRNVALVGHLQHGKTVFMDMLVEQTHHMATFDSQSEKHMRY 179
Query: 3038 TDTRIDEQERRISIKAVPMTLVLEDSNSKSYLCNIMDAPGHVNFSDEMTAALRLADGAVL 2859
TDTR+DEQERRISIKAVPM+LVLEDSN+KSYLCNIMDAPGHVNFSDEMTAALRLADGAVL
Sbjct: 180 TDTRVDEQERRISIKAVPMSLVLEDSNAKSYLCNIMDAPGHVNFSDEMTAALRLADGAVL 239
Query: 2858 IVDAAEGVMVNTERAIRHAIQDRLPIVVVINKVDRLITELKLPPKDAYHKIRHTLEVINN 2679
+VDA EGVMVNTERAIRHAIQ+RLPIVVV+NKVDRLITELKLPPKDAYHK+RHTLEVINN
Sbjct: 240 VVDAGEGVMVNTERAIRHAIQERLPIVVVMNKVDRLITELKLPPKDAYHKLRHTLEVINN 299
Query: 2678 HISAASSIAGDIQVIDPVAGNVCFASATAGWSFTLQSFAKLYGKLHGVPLEANKFASRLW 2499
HI+AASS+AGD+QVIDPVAGNVCFAS TAGWSFTLQSFAK+YGKLHGVPLEANKFASRLW
Sbjct: 300 HIAAASSVAGDVQVIDPVAGNVCFASGTAGWSFTLQSFAKMYGKLHGVPLEANKFASRLW 359
Query: 2498 GDFYYHPDTRTFKKKPPASGAERSFVEFVLEPLYKIYSQVIGEHKKSVETTLAELGVTLS 2319
GDFYYHPD+RTFKKKPP G ERSFVEFVLEPLYKIYSQVIGEHKKSVETTLAELGVTLS
Sbjct: 360 GDFYYHPDSRTFKKKPPVGGGERSFVEFVLEPLYKIYSQVIGEHKKSVETTLAELGVTLS 419
Query: 2318 NAAYRLNVRPLLRLACSSVFGSASGFTDMLVQHIPSPKDAAVKKVDHIYTGLKDSSIYKA 2139
NAAYRLNVRPLLRLACSSVFGSASGFTDMLVQHIPSP+DAAVKKVDHIYTG KDSSIYKA
Sbjct: 420 NAAYRLNVRPLLRLACSSVFGSASGFTDMLVQHIPSPRDAAVKKVDHIYTGPKDSSIYKA 479
Query: 2138 MVQCDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPDDEEDMTV 1959
M QCD SGPLMVN+TKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPDDEEDMTV
Sbjct: 480 MTQCDSSGPLMVNITKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPDDEEDMTV 539
Query: 1958 KEVTKLWVYQARDRMPIAEAPPGSWVLIEGVDASIMKTATLCNVDYDEDVYIFRPLQFNT 1779
KEVTKLWVYQARDRMPIAEAPPGSWVLIEGVDASIMKTATLCNVD+DEDVYIFRPL FNT
Sbjct: 540 KEVTKLWVYQARDRMPIAEAPPGSWVLIEGVDASIMKTATLCNVDFDEDVYIFRPLLFNT 599
Query: 1778 LSVVKTATEPLNPSELPKMVEGLRKISKSYPLAVTKVEESGEHTILGTGELYLDSIMKDL 1599
LSVVKTATEPLNPSELPKMVEGLRKISKSYPLAVTKVEESGEHTILGTGELYLDSIMKDL
Sbjct: 600 LSVVKTATEPLNPSELPKMVEGLRKISKSYPLAVTKVEESGEHTILGTGELYLDSIMKDL 659
Query: 1598 RELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENGV 1419
RELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENGV
Sbjct: 660 RELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENGV 719
Query: 1418 VSTDWNRKKLGEFFQTKYDWDLLAARSIWAFGPDKQGPNILLDDTLPTEVDKNLLNAVKD 1239
VSTDWNRKKLGEFFQTKYDWDLLAARSIWAFGPDKQGPNILLDDTLPTEVDK+LLNAVKD
Sbjct: 720 VSTDWNRKKLGEFFQTKYDWDLLAARSIWAFGPDKQGPNILLDDTLPTEVDKSLLNAVKD 779
Query: 1238 SIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMAT 1059
SIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMAT
Sbjct: 780 SIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMAT 839
Query: 1058 PRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFE 879
PRLMEP IQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAY+VKAFLPVIESFGFE
Sbjct: 840 PRLMEP-----IQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYLVKAFLPVIESFGFE 894
Query: 878 TDLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMS 699
TDLRYHTQGQAFC SVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMS
Sbjct: 895 TDLRYHTQGQAFCQSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMS 954
Query: 698 EDVSIGKFFDEAMMVELAQQAADLHQQMM 612
EDVSIGKFFDEAMMVELAQQAADLHQQM+
Sbjct: 955 EDVSIGKFFDEAMMVELAQQAADLHQQMI 983
>ref|XP_003549705.1| PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein component-like
[Glycine max]
Length = 988
Score = 1807 bits (4680), Expect = 0.0
Identities = 906/992 (91%), Positives = 935/992 (94%), Gaps = 3/992 (0%)
Frame = -1
Query: 3578 MDDSLYDEFGNYIGPEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE---GHANGWMTTG 3408
MDDSLYDEFGNYIGPEI G +NGWMTT
Sbjct: 1 MDDSLYDEFGNYIGPEIESDQDSDRDSDADADDNPDDQSDGGGTAHSDGEGPSNGWMTTI 60
Query: 3407 DTTDVEMVDNQVVLAEDKKYYPTAEEVYGDDVETLVMDEDEQPLEMPIIKPVKNMKFEVG 3228
+ ++NQVVLAEDKKYYPTAEEVYG+DVETLVMDEDEQPLE PIIKPV+N+KFEVG
Sbjct: 61 S----DELENQVVLAEDKKYYPTAEEVYGEDVETLVMDEDEQPLEQPIIKPVRNIKFEVG 116
Query: 3227 VKDSSTYVSSQFLLGLMSNPSLARNVALVGHLQHGKTVFMDMLVEQTHHMSTFDPQSEKH 3048
VKDSSTYVSSQFLLGLMSNP+L RNVALVG+LQHGKTVFMDMLVEQTHHMSTFD QSEKH
Sbjct: 117 VKDSSTYVSSQFLLGLMSNPTLVRNVALVGNLQHGKTVFMDMLVEQTHHMSTFDSQSEKH 176
Query: 3047 MRYTDTRIDEQERRISIKAVPMTLVLEDSNSKSYLCNIMDAPGHVNFSDEMTAALRLADG 2868
MRYTDTRIDEQERRISIKA+PM+LVLEDSNSKSYLCNIMD PGHVNFSDEMTAALRLADG
Sbjct: 177 MRYTDTRIDEQERRISIKAIPMSLVLEDSNSKSYLCNIMDTPGHVNFSDEMTAALRLADG 236
Query: 2867 AVLIVDAAEGVMVNTERAIRHAIQDRLPIVVVINKVDRLITELKLPPKDAYHKIRHTLEV 2688
AVLIVDAAEGVMVNTERAIRHAIQ+RLPIVVVINKVDRLITELKLPPKDAYHK+RHTLEV
Sbjct: 237 AVLIVDAAEGVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPKDAYHKLRHTLEV 296
Query: 2687 INNHISAASSIAGDIQVIDPVAGNVCFASATAGWSFTLQSFAKLYGKLHGVPLEANKFAS 2508
IN HISAASSIAG +QV+DPVAGNVCFASATAGWSFTLQSFAKLYGKLHG+PLEANKFAS
Sbjct: 297 INTHISAASSIAGGVQVVDPVAGNVCFASATAGWSFTLQSFAKLYGKLHGIPLEANKFAS 356
Query: 2507 RLWGDFYYHPDTRTFKKKPPASGAERSFVEFVLEPLYKIYSQVIGEHKKSVETTLAELGV 2328
RLWGD+Y+HPDTRTFKKKPPASG ERSFVEFVLEPLYKIYSQVIGEHKKSVETTLAELGV
Sbjct: 357 RLWGDYYFHPDTRTFKKKPPASGGERSFVEFVLEPLYKIYSQVIGEHKKSVETTLAELGV 416
Query: 2327 TLSNAAYRLNVRPLLRLACSSVFGSASGFTDMLVQHIPSPKDAAVKKVDHIYTGLKDSSI 2148
TLSNAAYRLNVRPLLRLACSSVFG ASGFTDMLVQHIPSP+DAA+KKVDHIYTG KDSSI
Sbjct: 417 TLSNAAYRLNVRPLLRLACSSVFGPASGFTDMLVQHIPSPRDAAIKKVDHIYTGPKDSSI 476
Query: 2147 YKAMVQCDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPDDEED 1968
YKAM QCD GPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQ VRVLGEGYSPDDEED
Sbjct: 477 YKAMAQCDSYGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQAVRVLGEGYSPDDEED 536
Query: 1967 MTVKEVTKLWVYQARDRMPIAEAPPGSWVLIEGVDASIMKTATLCNVDYDEDVYIFRPLQ 1788
MTVKEVTKLWVYQARDRMP+AEAPPGSWVLIEGVDASIMKT+TLCNVDYDEDVYIFRPLQ
Sbjct: 537 MTVKEVTKLWVYQARDRMPVAEAPPGSWVLIEGVDASIMKTSTLCNVDYDEDVYIFRPLQ 596
Query: 1787 FNTLSVVKTATEPLNPSELPKMVEGLRKISKSYPLAVTKVEESGEHTILGTGELYLDSIM 1608
FNTLSVVKTATEPLNPSELPKMVEGLRKISKSYPLAVTKVEESGEHTILGTGELYLDSIM
Sbjct: 597 FNTLSVVKTATEPLNPSELPKMVEGLRKISKSYPLAVTKVEESGEHTILGTGELYLDSIM 656
Query: 1607 KDLRELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIE 1428
KDLRELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIE
Sbjct: 657 KDLRELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIE 716
Query: 1427 NGVVSTDWNRKKLGEFFQTKYDWDLLAARSIWAFGPDKQGPNILLDDTLPTEVDKNLLNA 1248
NGVVSTDW++KKLGEFFQTKYDWDLLAARSIWAFGPDKQGPNILLDDTLPTEV+K+L+NA
Sbjct: 717 NGVVSTDWSKKKLGEFFQTKYDWDLLAARSIWAFGPDKQGPNILLDDTLPTEVNKDLMNA 776
Query: 1247 VKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFL 1068
VKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDA+IA E LHRGSGQIIPTARRVAYSAFL
Sbjct: 777 VKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDAKIANESLHRGSGQIIPTARRVAYSAFL 836
Query: 1067 MATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESF 888
MATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESF
Sbjct: 837 MATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESF 896
Query: 887 GFETDLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRK 708
GFETDLRYHTQGQAFC+SVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRK
Sbjct: 897 GFETDLRYHTQGQAFCMSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRK 956
Query: 707 GMSEDVSIGKFFDEAMMVELAQQAADLHQQMM 612
GMSEDVSI KFFDEAMMVELAQQAADLHQQMM
Sbjct: 957 GMSEDVSINKFFDEAMMVELAQQAADLHQQMM 988
>ref|XP_003542669.1| PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein component-like
[Glycine max]
Length = 986
Score = 1801 bits (4666), Expect = 0.0
Identities = 902/990 (91%), Positives = 932/990 (94%), Gaps = 1/990 (0%)
Frame = -1
Query: 3578 MDDSLYDEFGNYIGPEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGH-ANGWMTTGDT 3402
MDDSLYDEFGNYIGPEI +NGWMTT
Sbjct: 1 MDDSLYDEFGNYIGPEIESDRDSDRDSDADDNPDDQSDAVGAAHSDGEDPSNGWMTTIS- 59
Query: 3401 TDVEMVDNQVVLAEDKKYYPTAEEVYGDDVETLVMDEDEQPLEMPIIKPVKNMKFEVGVK 3222
+ ++NQVVLAEDKKYYPTAEEVYG+DVETLVMDEDEQPLE PIIKPV+N+KFEVGVK
Sbjct: 60 ---DELENQVVLAEDKKYYPTAEEVYGEDVETLVMDEDEQPLEQPIIKPVRNIKFEVGVK 116
Query: 3221 DSSTYVSSQFLLGLMSNPSLARNVALVGHLQHGKTVFMDMLVEQTHHMSTFDPQSEKHMR 3042
DSSTYVSSQFLLGLMSNP+L RNVALVGHLQHGKTVFMDMLVEQTHHMSTFD QSEKHMR
Sbjct: 117 DSSTYVSSQFLLGLMSNPTLVRNVALVGHLQHGKTVFMDMLVEQTHHMSTFDSQSEKHMR 176
Query: 3041 YTDTRIDEQERRISIKAVPMTLVLEDSNSKSYLCNIMDAPGHVNFSDEMTAALRLADGAV 2862
YTDTRIDEQERRISIKAVPM+LVLEDSNSKSYLCNIMD PGHVNFSDEMTAALRLADGAV
Sbjct: 177 YTDTRIDEQERRISIKAVPMSLVLEDSNSKSYLCNIMDTPGHVNFSDEMTAALRLADGAV 236
Query: 2861 LIVDAAEGVMVNTERAIRHAIQDRLPIVVVINKVDRLITELKLPPKDAYHKIRHTLEVIN 2682
LIVDAAEGVMVNTERAIRHAIQ+RLPIVVVINKVDRLITELKLPPKDAYHK+RHTLEVIN
Sbjct: 237 LIVDAAEGVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPKDAYHKLRHTLEVIN 296
Query: 2681 NHISAASSIAGDIQVIDPVAGNVCFASATAGWSFTLQSFAKLYGKLHGVPLEANKFASRL 2502
HISAASSIAG +QV+DPVAGNVCFASATAGWSFTL SFAKLYGKLHG+PLEANKFASRL
Sbjct: 297 THISAASSIAGGVQVVDPVAGNVCFASATAGWSFTLHSFAKLYGKLHGIPLEANKFASRL 356
Query: 2501 WGDFYYHPDTRTFKKKPPASGAERSFVEFVLEPLYKIYSQVIGEHKKSVETTLAELGVTL 2322
WGD+Y+HPDTR FKKKPPASG ERSFVEFVLEPLYKIYSQVIGEHKKSVETTLAELGV+L
Sbjct: 357 WGDYYFHPDTRAFKKKPPASGGERSFVEFVLEPLYKIYSQVIGEHKKSVETTLAELGVSL 416
Query: 2321 SNAAYRLNVRPLLRLACSSVFGSASGFTDMLVQHIPSPKDAAVKKVDHIYTGLKDSSIYK 2142
SNAAYRLNVRPLLRLACSSVFG ASGFTDMLVQHIPSP+DAA+KKVDHIY G KDSSIYK
Sbjct: 417 SNAAYRLNVRPLLRLACSSVFGPASGFTDMLVQHIPSPRDAAIKKVDHIYAGPKDSSIYK 476
Query: 2141 AMVQCDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPDDEEDMT 1962
AM QCD GP+MVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPDDEEDMT
Sbjct: 477 AMAQCDSYGPVMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPDDEEDMT 536
Query: 1961 VKEVTKLWVYQARDRMPIAEAPPGSWVLIEGVDASIMKTATLCNVDYDEDVYIFRPLQFN 1782
VKEVTKLWVYQARDRMP+AEAPPGSWVLIEGVDASIMKTATLCNVDYDEDVYIFRPLQFN
Sbjct: 537 VKEVTKLWVYQARDRMPVAEAPPGSWVLIEGVDASIMKTATLCNVDYDEDVYIFRPLQFN 596
Query: 1781 TLSVVKTATEPLNPSELPKMVEGLRKISKSYPLAVTKVEESGEHTILGTGELYLDSIMKD 1602
TLSVVKTATEPLNPSELPKMVEGLRKISKSYPLAVTKVEESGEHTILGTGELYLDSIMKD
Sbjct: 597 TLSVVKTATEPLNPSELPKMVEGLRKISKSYPLAVTKVEESGEHTILGTGELYLDSIMKD 656
Query: 1601 LRELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENG 1422
LRELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITM+AEPLERGLAEDIENG
Sbjct: 657 LRELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMVAEPLERGLAEDIENG 716
Query: 1421 VVSTDWNRKKLGEFFQTKYDWDLLAARSIWAFGPDKQGPNILLDDTLPTEVDKNLLNAVK 1242
VVSTDW++KKLG+FFQTKYDWDLLAARSIWAFGPDKQGPNILLDDTLPTEV+K+L+NAVK
Sbjct: 717 VVSTDWSKKKLGDFFQTKYDWDLLAARSIWAFGPDKQGPNILLDDTLPTEVNKDLMNAVK 776
Query: 1241 DSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMA 1062
DSIVQGFQWGAREGPLCDEPIRNVKFKIVDA+IA E LHRGSGQIIPTARRVAYSAFLMA
Sbjct: 777 DSIVQGFQWGAREGPLCDEPIRNVKFKIVDAKIATESLHRGSGQIIPTARRVAYSAFLMA 836
Query: 1061 TPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGF 882
TPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGF
Sbjct: 837 TPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGF 896
Query: 881 ETDLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGM 702
ETDLRYHTQGQAFC+SVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGM
Sbjct: 897 ETDLRYHTQGQAFCMSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGM 956
Query: 701 SEDVSIGKFFDEAMMVELAQQAADLHQQMM 612
SEDVSI KFFDEAMMVELAQQAADLHQQMM
Sbjct: 957 SEDVSINKFFDEAMMVELAQQAADLHQQMM 986
>ref|XP_002267199.1| PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein component
[Vitis vinifera] gi|147858113|emb|CAN81413.1|
hypothetical protein VITISV_031170 [Vitis vinifera]
Length = 988
Score = 1765 bits (4572), Expect = 0.0
Identities = 881/991 (88%), Positives = 925/991 (93%), Gaps = 2/991 (0%)
Frame = -1
Query: 3578 MDDSLYDEFGNYIGPEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGHA--NGWMTTGD 3405
MDDSLYDEFGNYIGPEI + A NGW+T +
Sbjct: 1 MDDSLYDEFGNYIGPEIESDRESDGDDQDEDIPDKPDEEEMVSDVEDAVAASNGWITASN 60
Query: 3404 TTDVEMVDNQVVLAEDKKYYPTAEEVYGDDVETLVMDEDEQPLEMPIIKPVKNMKFEVGV 3225
D+ DNQ+VLAEDKKYYPTAEEVYG+DVETLVMDEDEQPLE PIIKPV+N+KFE+GV
Sbjct: 61 DVDM---DNQIVLAEDKKYYPTAEEVYGEDVETLVMDEDEQPLEQPIIKPVRNIKFELGV 117
Query: 3224 KDSSTYVSSQFLLGLMSNPSLARNVALVGHLQHGKTVFMDMLVEQTHHMSTFDPQSEKHM 3045
KDSSTYVS+QFLLGLMSNP+L RNVALVGHLQHGKT+FMDMLVEQTHH+STFD SEKHM
Sbjct: 118 KDSSTYVSTQFLLGLMSNPALVRNVALVGHLQHGKTLFMDMLVEQTHHISTFDSNSEKHM 177
Query: 3044 RYTDTRIDEQERRISIKAVPMTLVLEDSNSKSYLCNIMDAPGHVNFSDEMTAALRLADGA 2865
RYTDTRIDEQERRISIKAVPM+LVLEDSNSKSYLCNIMD PGHVNFSDEMTAALRLADGA
Sbjct: 178 RYTDTRIDEQERRISIKAVPMSLVLEDSNSKSYLCNIMDTPGHVNFSDEMTAALRLADGA 237
Query: 2864 VLIVDAAEGVMVNTERAIRHAIQDRLPIVVVINKVDRLITELKLPPKDAYHKIRHTLEVI 2685
VLIVDAAEGVMVNTERAIRHAIQ+RLPIVVVINKVDRLITELKLPPKDAYHK+RHTLE+I
Sbjct: 238 VLIVDAAEGVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPKDAYHKLRHTLELI 297
Query: 2684 NNHISAASSIAGDIQVIDPVAGNVCFASATAGWSFTLQSFAKLYGKLHGVPLEANKFASR 2505
NNHISAASS AG++Q+IDP AGNVCFASA+AGWSFTLQSFAKLY KLHGVP +ANKFASR
Sbjct: 298 NNHISAASSTAGNVQIIDPAAGNVCFASASAGWSFTLQSFAKLYVKLHGVPFDANKFASR 357
Query: 2504 LWGDFYYHPDTRTFKKKPPASGAERSFVEFVLEPLYKIYSQVIGEHKKSVETTLAELGVT 2325
LWGD YYHPD R F+KKPPASG ERSFV+FVLEPLYKIYSQVIGEHKKSVE+TLAELGVT
Sbjct: 358 LWGDMYYHPDARVFRKKPPASGGERSFVQFVLEPLYKIYSQVIGEHKKSVESTLAELGVT 417
Query: 2324 LSNAAYRLNVRPLLRLACSSVFGSASGFTDMLVQHIPSPKDAAVKKVDHIYTGLKDSSIY 2145
LSNAAY+LNVRPLLRLACSSVFGSA+GFTDMLVQHIPS KDAA KKVDHIYTG KDS+IY
Sbjct: 418 LSNAAYKLNVRPLLRLACSSVFGSATGFTDMLVQHIPSAKDAAAKKVDHIYTGPKDSAIY 477
Query: 2144 KAMVQCDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPDDEEDM 1965
+AM CD SGPLMVNVTKLYPKSDCSVFDAFGRVYSG+IQTGQT+RVLGEGYSP+DEEDM
Sbjct: 478 QAMEDCDSSGPLMVNVTKLYPKSDCSVFDAFGRVYSGEIQTGQTLRVLGEGYSPEDEEDM 537
Query: 1964 TVKEVTKLWVYQARDRMPIAEAPPGSWVLIEGVDASIMKTATLCNVDYDEDVYIFRPLQF 1785
TVKEVTKLWVYQAR R+PI++APPGSWVLIEGVDASIMKTATLCN+DYDEDVYIFRPL F
Sbjct: 538 TVKEVTKLWVYQARYRIPISKAPPGSWVLIEGVDASIMKTATLCNLDYDEDVYIFRPLLF 597
Query: 1784 NTLSVVKTATEPLNPSELPKMVEGLRKISKSYPLAVTKVEESGEHTILGTGELYLDSIMK 1605
NTL VVKTATEPLNPSELPKMVEGLRKISKSYPLA+TKVEESGEHTILGTGELYLDSIMK
Sbjct: 598 NTLPVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMK 657
Query: 1604 DLRELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIEN 1425
DLRELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLE+GLAEDIEN
Sbjct: 658 DLRELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLEKGLAEDIEN 717
Query: 1424 GVVSTDWNRKKLGEFFQTKYDWDLLAARSIWAFGPDKQGPNILLDDTLPTEVDKNLLNAV 1245
GVVS DW+RKKLG+FFQTKYDWDLLAARSIWAFGPDKQGPNILLDDTL +EVDKNLLNAV
Sbjct: 718 GVVSIDWHRKKLGDFFQTKYDWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAV 777
Query: 1244 KDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLM 1065
KDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRG+GQIIPTARRVAYSAFLM
Sbjct: 778 KDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGTGQIIPTARRVAYSAFLM 837
Query: 1064 ATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFG 885
ATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFG
Sbjct: 838 ATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFG 897
Query: 884 FETDLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKG 705
FETDLRYHTQGQAFC SVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKG
Sbjct: 898 FETDLRYHTQGQAFCASVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKG 957
Query: 704 MSEDVSIGKFFDEAMMVELAQQAADLHQQMM 612
MSEDVSI KFFDEAM+VELAQQAADLHQQM+
Sbjct: 958 MSEDVSINKFFDEAMVVELAQQAADLHQQMI 988
>ref|XP_004139267.1| PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein component-like
[Cucumis sativus] gi|449493675|ref|XP_004159406.1|
PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein
component-like [Cucumis sativus]
Length = 988
Score = 1761 bits (4561), Expect = 0.0
Identities = 877/991 (88%), Positives = 923/991 (93%), Gaps = 2/991 (0%)
Frame = -1
Query: 3578 MDDSLYDEFGNYIGPEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE--GHANGWMTTGD 3405
MDDSLYDEFGNYIGPEI + G +NGW+TT +
Sbjct: 1 MDDSLYDEFGNYIGPEIDSDKDSDIEDEDENLMEKPEEDEGVSDGEDAGGASNGWITTSN 60
Query: 3404 TTDVEMVDNQVVLAEDKKYYPTAEEVYGDDVETLVMDEDEQPLEMPIIKPVKNMKFEVGV 3225
D+ DNQ+VLAEDKKYYPTAEEVYG+DVETLVMDEDE PLE PIIKPV+N+KFEVGV
Sbjct: 61 DVDM---DNQIVLAEDKKYYPTAEEVYGEDVETLVMDEDELPLEQPIIKPVRNVKFEVGV 117
Query: 3224 KDSSTYVSSQFLLGLMSNPSLARNVALVGHLQHGKTVFMDMLVEQTHHMSTFDPQSEKHM 3045
KDS TYVS+QFL+GLMSNP+L RNVALVGH+ HGKTVFMDML+EQTHHMSTFD + EKH+
Sbjct: 118 KDSRTYVSNQFLVGLMSNPTLVRNVALVGHVHHGKTVFMDMLIEQTHHMSTFDIKGEKHL 177
Query: 3044 RYTDTRIDEQERRISIKAVPMTLVLEDSNSKSYLCNIMDAPGHVNFSDEMTAALRLADGA 2865
RYTDTRIDEQER ISIKAVPM+LVLED NSKSYLCNIMD PGH NFSDEMTAALRLADGA
Sbjct: 178 RYTDTRIDEQERGISIKAVPMSLVLEDGNSKSYLCNIMDTPGHTNFSDEMTAALRLADGA 237
Query: 2864 VLIVDAAEGVMVNTERAIRHAIQDRLPIVVVINKVDRLITELKLPPKDAYHKIRHTLEVI 2685
VLIVDAAEGVMVNTERAIRHAIQ+RLPIVVVINKVDRLITELKLPP+DAY+K+RHTLE+I
Sbjct: 238 VLIVDAAEGVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPRDAYYKLRHTLEII 297
Query: 2684 NNHISAASSIAGDIQVIDPVAGNVCFASATAGWSFTLQSFAKLYGKLHGVPLEANKFASR 2505
NNHISAASS AG++QVIDP AGNVCFASATAGWSFTLQSFAKLY KLHG+P +A+KFA+R
Sbjct: 298 NNHISAASSTAGNVQVIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFATR 357
Query: 2504 LWGDFYYHPDTRTFKKKPPASGAERSFVEFVLEPLYKIYSQVIGEHKKSVETTLAELGVT 2325
LWGD+YYHPDTR FKKK PASG ERSFV+FVLEPLYKIYSQVIGEH+KSVETTLAELGVT
Sbjct: 358 LWGDYYYHPDTRGFKKKQPASGGERSFVQFVLEPLYKIYSQVIGEHRKSVETTLAELGVT 417
Query: 2324 LSNAAYRLNVRPLLRLACSSVFGSASGFTDMLVQHIPSPKDAAVKKVDHIYTGLKDSSIY 2145
LSNAAY+LNVRPLLRLACSSVFG ASGFTDMLVQHIPSP+DA+ +KVDHIYTG KDS IY
Sbjct: 418 LSNAAYKLNVRPLLRLACSSVFGGASGFTDMLVQHIPSPRDASSRKVDHIYTGPKDSMIY 477
Query: 2144 KAMVQCDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPDDEEDM 1965
KAM +CDPSGPLMVN+TKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPDDEEDM
Sbjct: 478 KAMKECDPSGPLMVNITKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPDDEEDM 537
Query: 1964 TVKEVTKLWVYQARDRMPIAEAPPGSWVLIEGVDASIMKTATLCNVDYDEDVYIFRPLQF 1785
VKEVTKLW+YQARDR+PIAEAPPGSWVLIEGVDASIMKTATL NVDYDEDVYIFRPLQF
Sbjct: 538 VVKEVTKLWLYQARDRVPIAEAPPGSWVLIEGVDASIMKTATLSNVDYDEDVYIFRPLQF 597
Query: 1784 NTLSVVKTATEPLNPSELPKMVEGLRKISKSYPLAVTKVEESGEHTILGTGELYLDSIMK 1605
NTL VVKTATEPLNPSELPKMVEGLRKISKSYPLA+TKVEESGEHTILGTGELYLDSIMK
Sbjct: 598 NTLPVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMK 657
Query: 1604 DLRELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIEN 1425
DLRELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIEN
Sbjct: 658 DLRELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIEN 717
Query: 1424 GVVSTDWNRKKLGEFFQTKYDWDLLAARSIWAFGPDKQGPNILLDDTLPTEVDKNLLNAV 1245
GVVS DW+RKKLG+FFQTKY+WDLLAARSIWAFGPDKQGPNILLDDTL +EVDKNLLNAV
Sbjct: 718 GVVSLDWSRKKLGDFFQTKYEWDLLAARSIWAFGPDKQGPNILLDDTLSSEVDKNLLNAV 777
Query: 1244 KDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLM 1065
KDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYS+FLM
Sbjct: 778 KDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSSFLM 837
Query: 1064 ATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFG 885
ATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADV QPGTPAYIVKAFLPVIESFG
Sbjct: 838 ATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVAQPGTPAYIVKAFLPVIESFG 897
Query: 884 FETDLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKG 705
FETDLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKG
Sbjct: 898 FETDLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKG 957
Query: 704 MSEDVSIGKFFDEAMMVELAQQAADLHQQMM 612
MSEDVSI KFFDEAMMVELAQQAADLHQQM+
Sbjct: 958 MSEDVSINKFFDEAMMVELAQQAADLHQQMI 988