BLASTX nr result

ID: Glycyrrhiza24_contig00001820 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00001820
         (1681 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546661.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2...   659   0.0  
ref|XP_003531811.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2...   648   0.0  
gb|AFK47453.1| unknown [Medicago truncatula]                          645   0.0  
ref|XP_003532904.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2...   583   e-164
ref|XP_002316157.1| predicted protein [Populus trichocarpa] gi|2...   574   e-161

>ref|XP_003546661.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Glycine max]
          Length = 417

 Score =  659 bits (1699), Expect = 0.0
 Identities = 328/421 (77%), Positives = 358/421 (85%)
 Frame = -1

Query: 1615 MGNSQAKKRDPQFSRNVVEGRIXXXXXXXXXXXXXXXXXXXXXXXXXXXPVSYEMHHGTG 1436
            MGNS AKKRD QFSRNVVEGR+                             +  ++ G+G
Sbjct: 1    MGNSHAKKRDTQFSRNVVEGRVPSPKNKTLSPSPSLEPPLPREPPPA---AAMSLNKGSG 57

Query: 1435 KLSTSTKEKYALIPDKFTSLEQVTTALRNEGLESSNLILGIDFTKSNEWTGRVSFNNRSL 1256
            KLS   KEKYALIPD FT+LEQVT ALR EGLESSNL+LGIDFTKSNEWTG VSFNNRSL
Sbjct: 58   KLSA--KEKYALIPDNFTTLEQVTIALRKEGLESSNLVLGIDFTKSNEWTGSVSFNNRSL 115

Query: 1255 HAIGDTPNPYERAISIIGKTLAPFDDDNLIPCFGFGDATTHDHEVFSFHADSSSCHGFEE 1076
            HAIG TPNPYE+AISIIGKTLAPFDDDNLIPCFGFGDATTHD EVFSFH+D+S CHGFEE
Sbjct: 116  HAIGSTPNPYEKAISIIGKTLAPFDDDNLIPCFGFGDATTHDQEVFSFHSDNSPCHGFEE 175

Query: 1075 VLACYQKVVPNLRLSGPTSYAPVIEAAIDIVEKTHGQFHVLVIVADGQVTTNAHSEDGEL 896
            VLACYQK+VPNLRLSGPTSYAPVIEAAIDIVEK+HGQFHVLVIVADGQVTT+A SEDGEL
Sbjct: 176  VLACYQKIVPNLRLSGPTSYAPVIEAAIDIVEKSHGQFHVLVIVADGQVTTSAASEDGEL 235

Query: 895  SPQEERTIKAIVDASSYPLSIVLVGVGDGPWEDMRKFDDKIPARDFDNFQFVNFTDIMSK 716
            SPQE RTIKAI DASSYPLSI+LVGVGDGPWEDM+KFDDKIPARDFDNFQFVNFTDIM+K
Sbjct: 236  SPQEARTIKAIADASSYPLSIILVGVGDGPWEDMKKFDDKIPARDFDNFQFVNFTDIMAK 295

Query: 715  NTSTSKKEAAFALAALMEIPFQFKAAIELGLLGRTTGRAKKMVPRPPPVAYSRPVRPAHF 536
             +S S+KEAAFALAALMEIPFQ+KAA ELGLLGR TGR+ K+VPRPPP  YS+ V PA  
Sbjct: 296  KSSPSEKEAAFALAALMEIPFQYKAATELGLLGRATGRSNKIVPRPPPAPYSQLVPPARV 355

Query: 535  LSHMPSSMEDERNQMVCDICLTNKKDLAFGCGHMSCRDCGSRLSDCHICRERITSRLRVF 356
            LS+ P+ M+DERNQM C ICLTNKKDLAFGCGHM+CRDCGSRL+DC ICR+RIT+RLRVF
Sbjct: 356  LSNTPTFMDDERNQMACAICLTNKKDLAFGCGHMTCRDCGSRLTDCPICRQRITNRLRVF 415

Query: 355  A 353
            +
Sbjct: 416  S 416


>ref|XP_003531811.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Glycine max]
          Length = 425

 Score =  648 bits (1672), Expect = 0.0
 Identities = 327/424 (77%), Positives = 353/424 (83%), Gaps = 3/424 (0%)
 Frame = -1

Query: 1615 MGNSQAKKRDPQFSRNVVEGRIXXXXXXXXXXXXXXXXXXXXXXXXXXXPVSYE---MHH 1445
            MGNS AKKRD QFSRNVV+GR+                           P       M  
Sbjct: 1    MGNSHAKKRDTQFSRNVVKGRVPSPKDKTLSSLQSPSSPSQSPSPSLEPPREPPPPVMFF 60

Query: 1444 GTGKLSTSTKEKYALIPDKFTSLEQVTTALRNEGLESSNLILGIDFTKSNEWTGRVSFNN 1265
             TG    S KEKYALIPD FT+LEQVTTALR EGLESSNL+LGIDFTKSNEWTG VSFNN
Sbjct: 61   NTGSGKLSAKEKYALIPDNFTTLEQVTTALRKEGLESSNLVLGIDFTKSNEWTGSVSFNN 120

Query: 1264 RSLHAIGDTPNPYERAISIIGKTLAPFDDDNLIPCFGFGDATTHDHEVFSFHADSSSCHG 1085
            +SLHAIG T NPYE+AISIIGKTLAPFDDDNLIPCFGFGDATTHD EVFSFH+D S CHG
Sbjct: 121  KSLHAIGSTANPYEKAISIIGKTLAPFDDDNLIPCFGFGDATTHDQEVFSFHSDHSPCHG 180

Query: 1084 FEEVLACYQKVVPNLRLSGPTSYAPVIEAAIDIVEKTHGQFHVLVIVADGQVTTNAHSED 905
            FEEVLACYQKVVPNLRLSGPTSYAPVIEAAIDIVEK+HGQFHVLVIVADGQVTT+A SE 
Sbjct: 181  FEEVLACYQKVVPNLRLSGPTSYAPVIEAAIDIVEKSHGQFHVLVIVADGQVTTSAASEH 240

Query: 904  GELSPQEERTIKAIVDASSYPLSIVLVGVGDGPWEDMRKFDDKIPARDFDNFQFVNFTDI 725
            GELSPQE RTIKAIVDASSYPLSI+LVGVGDGPWEDM+KFDDKIPARDFDNFQFVNFTDI
Sbjct: 241  GELSPQEARTIKAIVDASSYPLSIILVGVGDGPWEDMKKFDDKIPARDFDNFQFVNFTDI 300

Query: 724  MSKNTSTSKKEAAFALAALMEIPFQFKAAIELGLLGRTTGRAKKMVPRPPPVAYSRPVRP 545
            M+K +S S+KE AFALAALMEIPFQ+KAAIEL LLGR TGR+ K+VPRPPP  YSR V P
Sbjct: 301  MTKKSSPSEKETAFALAALMEIPFQYKAAIELELLGRATGRSNKIVPRPPPAPYSRLVPP 360

Query: 544  AHFLSHMPSSMEDERNQMVCDICLTNKKDLAFGCGHMSCRDCGSRLSDCHICRERITSRL 365
            A  LS+MP+ M+DERNQM C ICLTNKKDLAFGCGHM+CRDCGSRL++C ICR+RIT+RL
Sbjct: 361  ARVLSNMPTFMDDERNQMACAICLTNKKDLAFGCGHMTCRDCGSRLTNCPICRQRITNRL 420

Query: 364  RVFA 353
            RVF+
Sbjct: 421  RVFS 424


>gb|AFK47453.1| unknown [Medicago truncatula]
          Length = 407

 Score =  645 bits (1665), Expect = 0.0
 Identities = 328/424 (77%), Positives = 356/424 (83%), Gaps = 2/424 (0%)
 Frame = -1

Query: 1615 MGNSQAKKRDPQFSRNVVEGRIXXXXXXXXXXXXXXXXXXXXXXXXXXXPVSYEMH-HGT 1439
            MGNSQAKKR+ ++S NV E R                              S+ +H HG 
Sbjct: 1    MGNSQAKKREAEYSGNV-EAR--------------NTSKVLSPRFQQQEEASFNIHLHGK 45

Query: 1438 GKLSTSTKEKYALIPDKFTSLEQVTTALRNEGLESSNLILGIDFTKSNEWTGRVSFNNRS 1259
             KL+T  KEKYALIPD FT+LEQVT+ALR+EGLESSNLILGIDFTKSNEWTGR SFNN+S
Sbjct: 46   KKLAT--KEKYALIPDNFTTLEQVTSALRHEGLESSNLILGIDFTKSNEWTGRSSFNNKS 103

Query: 1258 LHAIGDTPNPYERAISIIGKTLAPFDDDNLIPCFGFGDATTHDHEVFSFHADSSSCHGFE 1079
            LH+IG TPNPYE+AISIIGKTLAPFDDDNLIPC GFGDATTHD EVFSFHAD SSCHGFE
Sbjct: 104  LHSIGGTPNPYEKAISIIGKTLAPFDDDNLIPCLGFGDATTHDSEVFSFHADDSSCHGFE 163

Query: 1078 EVLACYQKVVPNLRLSGPTSYAPVIEAAIDIVEKTHGQFHVLVIVADGQVTTNAHSEDGE 899
            EVLACYQK+VPNL LSGPTSYAPVIEAA+DIVEKTHGQFHVLVIVADGQVT   ++E G+
Sbjct: 164  EVLACYQKIVPNLSLSGPTSYAPVIEAAMDIVEKTHGQFHVLVIVADGQVTRYGNNESGK 223

Query: 898  LSPQEERTIKAIVDASSYPLSIVLVGVGDGPWEDMRKFDDKIPARDFDNFQFVNFTDIMS 719
            LSPQEE+TIKAI DASSYPLSIVLVGVGDGPWEDM+KFDDK+PARDFDNFQFVNFTDIMS
Sbjct: 224  LSPQEEKTIKAIADASSYPLSIVLVGVGDGPWEDMKKFDDKLPARDFDNFQFVNFTDIMS 283

Query: 718  KNTSTSKKEAAFALAALMEIPFQFKAAIELGLLGRTTGRAKKMVPRPPPVAYSRPVRPAH 539
            K  S S KEAAFALAALMEIPFQ+KAA+ELGLLGR TGRAKKMVPRPPP  YSR + P H
Sbjct: 284  KKISPSAKEAAFALAALMEIPFQYKAALELGLLGRATGRAKKMVPRPPPAPYSRHMPPEH 343

Query: 538  FLSHMP-SSMEDERNQMVCDICLTNKKDLAFGCGHMSCRDCGSRLSDCHICRERITSRLR 362
            FLS MP SSM+D+RNQM C ICLTNKKDLAFGCGHM+CRDCGSRLSDC ICR+RIT+RLR
Sbjct: 344  FLSRMPTSSMDDQRNQMECAICLTNKKDLAFGCGHMTCRDCGSRLSDCPICRQRITNRLR 403

Query: 361  VFAG 350
            VF G
Sbjct: 404  VFTG 407


>ref|XP_003532904.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Glycine max]
          Length = 451

 Score =  583 bits (1502), Expect = e-164
 Identities = 280/358 (78%), Positives = 317/358 (88%)
 Frame = -1

Query: 1423 STKEKYALIPDKFTSLEQVTTALRNEGLESSNLILGIDFTKSNEWTGRVSFNNRSLHAIG 1244
            S  +KYALI D F++LEQVTTALR EGLESSNLILGIDFTKSNEWTGR+SFN RSLHAIG
Sbjct: 98   SAAKKYALIRDNFSTLEQVTTALRKEGLESSNLILGIDFTKSNEWTGRISFNKRSLHAIG 157

Query: 1243 DTPNPYERAISIIGKTLAPFDDDNLIPCFGFGDATTHDHEVFSFHADSSSCHGFEEVLAC 1064
             TPNPYE+AISIIGKTLAPFDDDNLIPCFGFGDATTHD EVFSFH+D S  HGFEEVLAC
Sbjct: 158  STPNPYEKAISIIGKTLAPFDDDNLIPCFGFGDATTHDQEVFSFHSDHSPYHGFEEVLAC 217

Query: 1063 YQKVVPNLRLSGPTSYAPVIEAAIDIVEKTHGQFHVLVIVADGQVTTNAHSEDGELSPQE 884
            YQK+VPNL+LSGPTSYAPVIEAAIDIVEK  GQFHVLVIVADGQVT +  + DGELSPQE
Sbjct: 218  YQKIVPNLKLSGPTSYAPVIEAAIDIVEKNRGQFHVLVIVADGQVTRSVDTSDGELSPQE 277

Query: 883  ERTIKAIVDASSYPLSIVLVGVGDGPWEDMRKFDDKIPARDFDNFQFVNFTDIMSKNTST 704
            E+TIKA+VDAS+YPL+IVLVGVGDGPWEDMRKFDDKIPARD+DNFQFVNFT+IMSKN S 
Sbjct: 278  EKTIKAVVDASAYPLAIVLVGVGDGPWEDMRKFDDKIPARDYDNFQFVNFTEIMSKNISP 337

Query: 703  SKKEAAFALAALMEIPFQFKAAIELGLLGRTTGRAKKMVPRPPPVAYSRPVRPAHFLSHM 524
            S+KEAAFALAALMEIPFQ+KA +E G+LGR TGRAK++VP+PPPV YSRP        + 
Sbjct: 338  SEKEAAFALAALMEIPFQYKATMEFGILGRVTGRAKRIVPKPPPVPYSRPAPSI----NT 393

Query: 523  PSSMEDERNQMVCDICLTNKKDLAFGCGHMSCRDCGSRLSDCHICRERITSRLRVFAG 350
             +S  D++NQ  C +CLTN +DLAFGCGHM+CR+CG +L++C +CRERITSRLRV++G
Sbjct: 394  AASSGDDQNQTACPVCLTNARDLAFGCGHMTCRECGHKLTNCPMCRERITSRLRVYSG 451


>ref|XP_002316157.1| predicted protein [Populus trichocarpa] gi|222865197|gb|EEF02328.1|
            predicted protein [Populus trichocarpa]
          Length = 396

 Score =  574 bits (1479), Expect = e-161
 Identities = 274/357 (76%), Positives = 316/357 (88%)
 Frame = -1

Query: 1423 STKEKYALIPDKFTSLEQVTTALRNEGLESSNLILGIDFTKSNEWTGRVSFNNRSLHAIG 1244
            S K+KY+ IPD F+SLEQVTTALR  GLESSNL++GIDFTKSNEWTG+VSFNNRSLHAIG
Sbjct: 41   SIKQKYSFIPDNFSSLEQVTTALREAGLESSNLVVGIDFTKSNEWTGKVSFNNRSLHAIG 100

Query: 1243 DTPNPYERAISIIGKTLAPFDDDNLIPCFGFGDATTHDHEVFSFHADSSSCHGFEEVLAC 1064
            DTPNPYE+AISIIGKT+APFD+DNLIPCFGFGDATTHD EVFSFH+D S CHGFEEVLAC
Sbjct: 101  DTPNPYEKAISIIGKTMAPFDEDNLIPCFGFGDATTHDQEVFSFHSDHSPCHGFEEVLAC 160

Query: 1063 YQKVVPNLRLSGPTSYAPVIEAAIDIVEKTHGQFHVLVIVADGQVTTNAHSEDGELSPQE 884
            Y+K+VPNLRLSGPTSY PVIEAAIDIVEK+ GQ+HVL+I+ADGQVT +  + DGE+SPQE
Sbjct: 161  YKKIVPNLRLSGPTSYGPVIEAAIDIVEKSGGQYHVLLIIADGQVTRSVDTGDGEMSPQE 220

Query: 883  ERTIKAIVDASSYPLSIVLVGVGDGPWEDMRKFDDKIPARDFDNFQFVNFTDIMSKNTST 704
            E+TIKAIVDASSYPLSI+LVGVGDGPWEDM++FDDK+PAR+FDNFQFVNFT IMSKN + 
Sbjct: 221  EQTIKAIVDASSYPLSIILVGVGDGPWEDMKRFDDKLPAREFDNFQFVNFTAIMSKNATI 280

Query: 703  SKKEAAFALAALMEIPFQFKAAIELGLLGRTTGRAKKMVPRPPPVAYSRPVRPAHFLSHM 524
            S+KE AFALAALMEIP Q+KAA+E G++GR+ G+AKK+VPRPPPV YSR        +H+
Sbjct: 281  SEKETAFALAALMEIPLQYKAAVEFGIIGRSMGQAKKIVPRPPPVPYSRRPVLDREPTHV 340

Query: 523  PSSMEDERNQMVCDICLTNKKDLAFGCGHMSCRDCGSRLSDCHICRERITSRLRVFA 353
             S + DER Q  C ICLTN+KDLAFGCGHM+CRDCGSR+S C ICR  ITSR+R+FA
Sbjct: 341  SSPVLDERTQ-ACPICLTNRKDLAFGCGHMTCRDCGSRVSSCPICRRPITSRIRLFA 396


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