BLASTX nr result

ID: Glycyrrhiza24_contig00001816 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00001816
         (1175 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P29500.1|TBB1_PEA RecName: Full=Tubulin beta-1 chain; AltName...   744   0.0  
gb|ACI03399.1| beta-tubulin [Prunus salicina var. cordata]            741   0.0  
ref|XP_003559023.1| PREDICTED: tubulin beta-1 chain-like [Brachy...   740   0.0  
ref|XP_003520939.1| PREDICTED: tubulin beta-2 chain-like [Glycin...   739   0.0  
ref|XP_003516925.1| PREDICTED: tubulin beta-2 chain-like [Glycin...   739   0.0  

>sp|P29500.1|TBB1_PEA RecName: Full=Tubulin beta-1 chain; AltName: Full=Beta-1-tubulin
            gi|20758|emb|CAA38613.1| beta-tubulin 1 [Pisum sativum]
          Length = 450

 Score =  744 bits (1921), Expect = 0.0
 Identities = 363/391 (92%), Positives = 373/391 (95%)
 Frame = +1

Query: 1    IQGGQCGNQIGSKFWEVVCAEHGIDPTGRYCGDTEELQLERINVYYNEAGGGRFVPRAVL 180
            IQGGQCGNQIG+KFWEVVCAEHGIDPTGRY GD++ LQLERI+VYYNEA GGRFVPRAVL
Sbjct: 7    IQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSD-LQLERIDVYYNEASGGRFVPRAVL 65

Query: 181  MDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAE 360
            MDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAE
Sbjct: 66   MDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAE 125

Query: 361  NCDCLQGFQLCHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNA 540
            NCDCLQGFQ+CH              ISKIREEYPDRMM+TFSVFPSPKVSDTVVEPYNA
Sbjct: 126  NCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNA 185

Query: 541  TLSVHQLVENADECMVLDNEALYDICFRILKLTNPSFGDLNHLISATMSGVTCCLRFPGQ 720
            TLSVHQLVENADE MVLDNEALYDICFRILKL+NPSFGDLNHLISATMSGVTCCLRFPGQ
Sbjct: 186  TLSVHQLVENADEVMVLDNEALYDICFRILKLSNPSFGDLNHLISATMSGVTCCLRFPGQ 245

Query: 721  LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRTLSVPELSQQMWDSKNMMCAADP 900
            LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRTLSVPEL+QQMWD+KNMMCAADP
Sbjct: 246  LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRTLSVPELTQQMWDAKNMMCAADP 305

Query: 901  RHGRYLTASAMFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMAS 1080
            RHGRYLTASAMFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMAS
Sbjct: 306  RHGRYLTASAMFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMAS 365

Query: 1081 TFIGNSTSIQEMFRRVSEQFTAMFKRKAFLH 1173
            TFIGNSTSIQEMFRRVSEQFTAMF+RKAFLH
Sbjct: 366  TFIGNSTSIQEMFRRVSEQFTAMFRRKAFLH 396


>gb|ACI03399.1| beta-tubulin [Prunus salicina var. cordata]
          Length = 446

 Score =  741 bits (1913), Expect = 0.0
 Identities = 361/391 (92%), Positives = 370/391 (94%)
 Frame = +1

Query: 1    IQGGQCGNQIGSKFWEVVCAEHGIDPTGRYCGDTEELQLERINVYYNEAGGGRFVPRAVL 180
            IQGGQCGNQIG+KFWEVVCAEHGID TGRY GD+E LQLER+NVYYNEA GGR+VPRAVL
Sbjct: 7    IQGGQCGNQIGAKFWEVVCAEHGIDSTGRYHGDSE-LQLERVNVYYNEASGGRYVPRAVL 65

Query: 181  MDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAE 360
            MDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAE
Sbjct: 66   MDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAE 125

Query: 361  NCDCLQGFQLCHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNA 540
            NCDCLQGFQ+CH              ISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNA
Sbjct: 126  NCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNA 185

Query: 541  TLSVHQLVENADECMVLDNEALYDICFRILKLTNPSFGDLNHLISATMSGVTCCLRFPGQ 720
            TLSVHQLVENADECMVLDNEALYDICFR LKLT PSFGDLNHLISATMSGVTCCLRFPGQ
Sbjct: 186  TLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ 245

Query: 721  LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRTLSVPELSQQMWDSKNMMCAADP 900
            LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYR L+VPEL+QQMWDSKNMMCAADP
Sbjct: 246  LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADP 305

Query: 901  RHGRYLTASAMFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMAS 1080
            RHGRYLTASAMFRGKMSTKEVD+QMMNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMAS
Sbjct: 306  RHGRYLTASAMFRGKMSTKEVDDQMMNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMAS 365

Query: 1081 TFIGNSTSIQEMFRRVSEQFTAMFKRKAFLH 1173
            TFIGNSTSIQEMFRRVSEQFTAMF+RKAFLH
Sbjct: 366  TFIGNSTSIQEMFRRVSEQFTAMFRRKAFLH 396


>ref|XP_003559023.1| PREDICTED: tubulin beta-1 chain-like [Brachypodium distachyon]
          Length = 448

 Score =  740 bits (1910), Expect = 0.0
 Identities = 358/391 (91%), Positives = 368/391 (94%)
 Frame = +1

Query: 1    IQGGQCGNQIGSKFWEVVCAEHGIDPTGRYCGDTEELQLERINVYYNEAGGGRFVPRAVL 180
            IQGGQCGNQIG+KFWEVVCAEHGID TGRY GDT +LQLER+NVYYNEA  GRFVPRAVL
Sbjct: 7    IQGGQCGNQIGAKFWEVVCAEHGIDATGRYGGDTPDLQLERVNVYYNEASCGRFVPRAVL 66

Query: 181  MDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAE 360
            MDLEPGTMDS+RSGPYG IFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAE
Sbjct: 67   MDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAE 126

Query: 361  NCDCLQGFQLCHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNA 540
            NCDCLQGFQ+CH              ISKIREEYPDRMM+TFSVFPSPKVSDTVVEPYNA
Sbjct: 127  NCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNA 186

Query: 541  TLSVHQLVENADECMVLDNEALYDICFRILKLTNPSFGDLNHLISATMSGVTCCLRFPGQ 720
            TLSVHQLVENADECMVLDNEALYDICFR LKLT PSFGDLNHLISATMSGVTCCLRFPGQ
Sbjct: 187  TLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ 246

Query: 721  LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRTLSVPELSQQMWDSKNMMCAADP 900
            LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYR L+VPEL+QQMWDSKNMMCAADP
Sbjct: 247  LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADP 306

Query: 901  RHGRYLTASAMFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMAS 1080
            RHGRYLTASAMFRGKMSTKEVDEQM+NVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMAS
Sbjct: 307  RHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMAS 366

Query: 1081 TFIGNSTSIQEMFRRVSEQFTAMFKRKAFLH 1173
            TFIGNSTSIQEMFRRVSEQFTAMF+RKAFLH
Sbjct: 367  TFIGNSTSIQEMFRRVSEQFTAMFRRKAFLH 397


>ref|XP_003520939.1| PREDICTED: tubulin beta-2 chain-like [Glycine max]
          Length = 449

 Score =  739 bits (1909), Expect = 0.0
 Identities = 361/391 (92%), Positives = 370/391 (94%)
 Frame = +1

Query: 1    IQGGQCGNQIGSKFWEVVCAEHGIDPTGRYCGDTEELQLERINVYYNEAGGGRFVPRAVL 180
            IQGGQCGNQIG+KFWEVVCAEHGIDPTGRY GD+E LQLERINVYYNEA  GRFVPRAVL
Sbjct: 7    IQGGQCGNQIGAKFWEVVCAEHGIDPTGRYGGDSE-LQLERINVYYNEASCGRFVPRAVL 65

Query: 181  MDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAE 360
            MDLEPGTMDS+RSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAE
Sbjct: 66   MDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAE 125

Query: 361  NCDCLQGFQLCHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNA 540
            NCDCLQGFQ+CH              ISKIREEYPDRMM+TFSVFPSPKVSDTVVEPYNA
Sbjct: 126  NCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNA 185

Query: 541  TLSVHQLVENADECMVLDNEALYDICFRILKLTNPSFGDLNHLISATMSGVTCCLRFPGQ 720
            TLSVHQLVENADECMVLDNEALYDICFR LKLT PSFGDLNHLISATMSGVTCCLRFPGQ
Sbjct: 186  TLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ 245

Query: 721  LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRTLSVPELSQQMWDSKNMMCAADP 900
            LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYR LSVPEL+QQMWDSKNMMCAADP
Sbjct: 246  LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALSVPELTQQMWDSKNMMCAADP 305

Query: 901  RHGRYLTASAMFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMAS 1080
            RHGRYLTASAMFRGKMSTKEVDEQM+NVQNKNSSYFVEWIP+NVKSTVCDIPPTGLKMAS
Sbjct: 306  RHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPHNVKSTVCDIPPTGLKMAS 365

Query: 1081 TFIGNSTSIQEMFRRVSEQFTAMFKRKAFLH 1173
            TFIGNSTSIQEMFRRVSEQFTAMF+RKAFLH
Sbjct: 366  TFIGNSTSIQEMFRRVSEQFTAMFRRKAFLH 396


>ref|XP_003516925.1| PREDICTED: tubulin beta-2 chain-like [Glycine max]
          Length = 449

 Score =  739 bits (1909), Expect = 0.0
 Identities = 361/391 (92%), Positives = 370/391 (94%)
 Frame = +1

Query: 1    IQGGQCGNQIGSKFWEVVCAEHGIDPTGRYCGDTEELQLERINVYYNEAGGGRFVPRAVL 180
            IQGGQCGNQIG+KFWEVVCAEHGIDPTGRY GD+E LQLERINVYYNEA  GRFVPRAVL
Sbjct: 7    IQGGQCGNQIGAKFWEVVCAEHGIDPTGRYGGDSE-LQLERINVYYNEASCGRFVPRAVL 65

Query: 181  MDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAE 360
            MDLEPGTMDS+RSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAE
Sbjct: 66   MDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAE 125

Query: 361  NCDCLQGFQLCHXXXXXXXXXXXXXXISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNA 540
            NCDCLQGFQ+CH              ISKIREEYPDRMM+TFSVFPSPKVSDTVVEPYNA
Sbjct: 126  NCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNA 185

Query: 541  TLSVHQLVENADECMVLDNEALYDICFRILKLTNPSFGDLNHLISATMSGVTCCLRFPGQ 720
            TLSVHQLVENADECMVLDNEALYDICFR LKLT PSFGDLNHLISATMSGVTCCLRFPGQ
Sbjct: 186  TLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQ 245

Query: 721  LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRTLSVPELSQQMWDSKNMMCAADP 900
            LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYR LSVPEL+QQMWDSKNMMCAADP
Sbjct: 246  LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALSVPELTQQMWDSKNMMCAADP 305

Query: 901  RHGRYLTASAMFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMAS 1080
            RHGRYLTASAMFRGKMSTKEVDEQM+NVQNKNSSYFVEWIP+NVKSTVCDIPPTGLKMAS
Sbjct: 306  RHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPHNVKSTVCDIPPTGLKMAS 365

Query: 1081 TFIGNSTSIQEMFRRVSEQFTAMFKRKAFLH 1173
            TFIGNSTSIQEMFRRVSEQFTAMF+RKAFLH
Sbjct: 366  TFIGNSTSIQEMFRRVSEQFTAMFRRKAFLH 396


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