BLASTX nr result

ID: Glycyrrhiza24_contig00001762 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00001762
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP43505.2| katanin-like protein [Gossypium hirsutum]               77   1e-12
gb|AAP83637.1| katanin [Gossypium hirsutum]                            77   1e-12
ref|XP_003528370.1| PREDICTED: katanin p60 ATPase-containing sub...    77   2e-12
ref|XP_002284961.1| PREDICTED: katanin p60 ATPase-containing sub...    75   4e-12
emb|CAN76004.1| hypothetical protein VITISV_021762 [Vitis vinifera]    75   4e-12

>gb|AAP43505.2| katanin-like protein [Gossypium hirsutum]
          Length = 520

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 35/38 (92%), Positives = 37/38 (97%)
 Frame = +2

Query: 2   KDPVAMCDFEEALVKVQRSVSQADIERHEKWFNEFGSA 115
           KDPVAMCDFEEAL KVQRSVSQADIE+HEKWF+EFGSA
Sbjct: 483 KDPVAMCDFEEALAKVQRSVSQADIEKHEKWFSEFGSA 520


>gb|AAP83637.1| katanin [Gossypium hirsutum]
          Length = 520

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 35/38 (92%), Positives = 37/38 (97%)
 Frame = +2

Query: 2   KDPVAMCDFEEALVKVQRSVSQADIERHEKWFNEFGSA 115
           KDPVAMCDFEEAL KVQRSVSQADIE+HEKWF+EFGSA
Sbjct: 483 KDPVAMCDFEEALAKVQRSVSQADIEKHEKWFSEFGSA 520


>ref|XP_003528370.1| PREDICTED: katanin p60 ATPase-containing subunit-like [Glycine max]
          Length = 529

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 36/38 (94%), Positives = 36/38 (94%)
 Frame = +2

Query: 2   KDPVAMCDFEEALVKVQRSVSQADIERHEKWFNEFGSA 115
           KDPVAMCDFEEAL KVQRSVSQADIERHEKWF EFGSA
Sbjct: 492 KDPVAMCDFEEALGKVQRSVSQADIERHEKWFTEFGSA 529


>ref|XP_002284961.1| PREDICTED: katanin p60 ATPase-containing subunit [Vitis vinifera]
           gi|297743333|emb|CBI36200.3| unnamed protein product
           [Vitis vinifera]
          Length = 521

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 34/37 (91%), Positives = 36/37 (97%)
 Frame = +2

Query: 5   DPVAMCDFEEALVKVQRSVSQADIERHEKWFNEFGSA 115
           DPVAMCDFEEA+ KVQRSVSQADIERHEKWF+EFGSA
Sbjct: 485 DPVAMCDFEEAITKVQRSVSQADIERHEKWFSEFGSA 521


>emb|CAN76004.1| hypothetical protein VITISV_021762 [Vitis vinifera]
          Length = 512

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 34/37 (91%), Positives = 36/37 (97%)
 Frame = +2

Query: 5   DPVAMCDFEEALVKVQRSVSQADIERHEKWFNEFGSA 115
           DPVAMCDFEEA+ KVQRSVSQADIERHEKWF+EFGSA
Sbjct: 476 DPVAMCDFEEAITKVQRSVSQADIERHEKWFSEFGSA 512


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