BLASTX nr result
ID: Glycyrrhiza24_contig00001759
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00001759
(1541 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD37021.1| putative non-LTR retrolelement reverse transcript... 74 7e-18
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas] 86 2e-17
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas] 86 3e-17
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas] 85 5e-17
emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ... 75 6e-17
>gb|AAD37021.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
thaliana]
Length = 732
Score = 73.6 bits (179), Expect(2) = 7e-18
Identities = 50/154 (32%), Positives = 78/154 (50%), Gaps = 5/154 (3%)
Frame = -1
Query: 1325 LSFAGHVMLAQASVRAIPCYIMQTSLLPASIYEEADKICRDFIWESSQDCSKRHLVSWEE 1146
LS AG V L +A + +IP + M T LP S + DK+ R F+W SS K+HL+SW+
Sbjct: 309 LSLAGRVTLTKAVLSSIPVHTMSTIALPKSTLDGLDKVSRSFLWGSSVTQRKQHLISWKR 368
Query: 1145 TCKPENEGGARLSKSPCLK*SLYDEA--RMENDCSS--SKVVG*SYAEKKYACCVQTIPR 978
CKP +EGG + K+ + +L + R+ D S ++++ +Y + T R
Sbjct: 369 VCKPRSEGGLGIRKAQDMNKALLSKVGWRLIQDYHSLWARIMRCNYRVQDVRDGAWTKVR 428
Query: 977 VVN*SFASLTWKAISSSWHRVA-ANLLCVIKDGQ 879
S S TW++++ V L VI DG+
Sbjct: 429 ----SVCSSTWRSVALGMREVVIPGLSWVIGDGR 458
Score = 44.7 bits (104), Expect(2) = 7e-18
Identities = 24/58 (41%), Positives = 33/58 (56%)
Frame = -3
Query: 1539 KVNFHKTHVFFSKNVSREKAHQISGEMNVQETDEIGSYLGAL*SIIGRRRNTMLFSSI 1366
KV+ K+ +FFS+NVSR+ IS E + T E+G YLG ++ RR N F I
Sbjct: 238 KVSLEKSKIFFSENVSRDLGKLISDESGISSTRELGKYLGM--PVLQRRINKDTFGDI 293
>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 86.3 bits (212), Expect(2) = 2e-17
Identities = 107/486 (22%), Positives = 181/486 (37%), Gaps = 20/486 (4%)
Frame = -2
Query: 1414 MIHYRKTKEHYAFLLNKMRKKLSGWKAXXXXXXXXXXXXXXXXSGLFLAILCKLPFYRLL 1235
M+ R ++ + +++KMR KLS WKA L A L +P Y +
Sbjct: 759 MLKERVSRNTFNAVIDKMRTKLSSWKASSLNMAGRRV--------LVQASLATVPTYTMQ 810
Query: 1234 SMRKLTKYAGTLYGKALRIVVSGI*SLGRKL--------VNRKMKGGLDFQNLHALNEAY 1079
M + K R + G + RKL + +GGL + N A+
Sbjct: 811 VMALPVSTCNEI-DKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFNRAF 869
Query: 1078 MMKLGWKMIVHPQKLWVEVMQKKNM-HVVFRLFPXXXXXXXXXXXXXXXXXXXXGWLRIY 902
+ K+ W++ + KLWV+V+++K + + F G ++
Sbjct: 870 LTKMAWQIFSNIDKLWVKVLREKYVKNADFLHLQSQSNCSWGWRSIMKGKDVLAGAIKWN 929
Query: 901 CALLRMVN*VRFWKD------P*VLGVPCILDVVEADVPSHEINFHVPCYGSLVGWTWDK 740
R +N FW D P CI D+ ++ S W
Sbjct: 930 VGNGRKIN---FWNDWWVGDGPLASNTDCINQPHMTDIKVEDL------ITSQRRWDTGA 980
Query: 739 FQHLILLDVREKI-ASICPS*AGDTDLSCWQPSSDGNFTLKSAYKVIASFVNVDACDSYI 563
+++ ++ + + A+ + D W S+ G T+ SAY +IA D +I
Sbjct: 981 LHNILPTNMIDMVRATPIAINSEQEDFLSWPHSTTGMVTVSSAYSLIAGHDGDDRSHDWI 1040
Query: 562 FKLV*EWEGPPRIKDLLWRLAHGRLLTNEERACFNSNIDTTCSRYLLESENFMHVLRDCK 383
++ +IK +W++ L+ N ER +C E E H+ R C
Sbjct: 1041 WRAT----CTEKIKLFMWKIVKNGLMVNVERKRRGLADAASCPVCGEEDETLDHLFRRCL 1096
Query: 382 QVLSFWSQLVEPDKWSQFASRRFYSWLKWNLSSQDVGHLLIPWSTMVGVTLDALWRDTNS 203
+ W V P + +SW+K SSQ WS + L LW+ N
Sbjct: 1097 LAEACWDSAVPPLTFQTSNHLHMHSWMKAACSSQQKDGYSTNWSLIFPYILWNLWKARNR 1156
Query: 202 LIFNHKSEIDDNLLQQVIHQARFIYFESQKAIPML----GLPHKKEVDIAWTPPPRLAFK 35
L+F++ ++L + + ES +A +L GL + + W+PP K
Sbjct: 1157 LVFDNNITAPSDILNR-------SFMESSEARCLLAKRTGLQTAFQTWVVWSPPAAGFTK 1209
Query: 34 LNVDGS 17
LN DG+
Sbjct: 1210 LNSDGA 1215
Score = 30.8 bits (68), Expect(2) = 2e-17
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -3
Query: 1539 KVNFHKTHVFFSKNVSREKAHQISGEMNVQETDEIGSYLG 1420
KVNF K+ +F S NV+ I + V + +G+YLG
Sbjct: 717 KVNFSKSLLFCSSNVNAGLKRAIGSILQVPVAESLGTYLG 756
>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 85.5 bits (210), Expect(2) = 3e-17
Identities = 107/486 (22%), Positives = 181/486 (37%), Gaps = 20/486 (4%)
Frame = -2
Query: 1414 MIHYRKTKEHYAFLLNKMRKKLSGWKAXXXXXXXXXXXXXXXXSGLFLAILCKLPFYRLL 1235
M+ R ++ + +++KMR KLS WKA L A L +P Y +
Sbjct: 759 MLKERVSRNTFNAVIDKMRTKLSSWKASSLNMAGRRV--------LVQASLATVPTYTMQ 810
Query: 1234 SMRKLTKYAGTLYGKALRIVVSGI*SLGRKL--------VNRKMKGGLDFQNLHALNEAY 1079
M + K R + G + RKL + +GGL + N A+
Sbjct: 811 VMALPVSTCNEI-DKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFNRAF 869
Query: 1078 MMKLGWKMIVHPQKLWVEVMQKKNM-HVVFRLFPXXXXXXXXXXXXXXXXXXXXGWLRIY 902
+ K+ W++ + KLWV+V+++K + + F G ++
Sbjct: 870 LTKMAWQIFSNIDKLWVKVLREKYVKNADFLHLQSQSNCSWGWRSIMKGKDVLAGAIKWN 929
Query: 901 CALLRMVN*VRFWKD------P*VLGVPCILDVVEADVPSHEINFHVPCYGSLVGWTWDK 740
R +N FW D P CI D+ ++ S W
Sbjct: 930 VGNGRKIN---FWNDWWVGDGPLASNTDCINQPHMTDIKVEDL------ITSQRRWDTGA 980
Query: 739 FQHLILLDVREKI-ASICPS*AGDTDLSCWQPSSDGNFTLKSAYKVIASFVNVDACDSYI 563
+++ ++ + + A+ + D W S+ G T+ SAY +IA D +I
Sbjct: 981 LHNILPTNMIDMVRATPIAINSEQEDFLSWPHSTTGMVTVSSAYSLIAGHDGDDRSHDWI 1040
Query: 562 FKLV*EWEGPPRIKDLLWRLAHGRLLTNEERACFNSNIDTTCSRYLLESENFMHVLRDCK 383
++ +IK +W++ L+ N ER +C E E H+ R C
Sbjct: 1041 WRAT----CTEKIKLFMWKIVKNGLMVNVERKRRGLADAASCPVCGEEDETLDHLFRRCL 1096
Query: 382 QVLSFWSQLVEPDKWSQFASRRFYSWLKWNLSSQDVGHLLIPWSTMVGVTLDALWRDTNS 203
+ W V P + +SW+K SSQ WS + L LW+ N
Sbjct: 1097 LAEACWDSAVPPLTFQTSNHLHMHSWMKAACSSQQKDGYGTNWSLIFPYILWNLWKARNR 1156
Query: 202 LIFNHKSEIDDNLLQQVIHQARFIYFESQKAIPML----GLPHKKEVDIAWTPPPRLAFK 35
L+F++ ++L + + ES +A +L GL + + W+PP K
Sbjct: 1157 LVFDNNITAPSDILNR-------SFMESSEARCLLAKRTGLQTAFQTWVVWSPPAAGFTK 1209
Query: 34 LNVDGS 17
LN DG+
Sbjct: 1210 LNSDGA 1215
Score = 30.8 bits (68), Expect(2) = 3e-17
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -3
Query: 1539 KVNFHKTHVFFSKNVSREKAHQISGEMNVQETDEIGSYLG 1420
KVNF K+ +F S NV+ I + V + +G+YLG
Sbjct: 717 KVNFSKSLLFCSSNVNAGLKRAIGSILQVPVAESLGTYLG 756
>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
Length = 1898
Score = 84.7 bits (208), Expect(2) = 5e-17
Identities = 106/486 (21%), Positives = 181/486 (37%), Gaps = 20/486 (4%)
Frame = -2
Query: 1414 MIHYRKTKEHYAFLLNKMRKKLSGWKAXXXXXXXXXXXXXXXXSGLFLAILCKLPFYRLL 1235
M+ R ++ + +++KMR KLS WKA L A L +P Y +
Sbjct: 1291 MLKERVSRNTFNAVIDKMRTKLSSWKASSLNMAGRRV--------LVQASLATVPTYTMQ 1342
Query: 1234 SMRKLTKYAGTLYGKALRIVVSGI*SLGRKL--------VNRKMKGGLDFQNLHALNEAY 1079
M + K R + G + RKL + +GGL + N A+
Sbjct: 1343 VMALPVSTCNEI-DKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFNRAF 1401
Query: 1078 MMKLGWKMIVHPQKLWVEVMQKKNM-HVVFRLFPXXXXXXXXXXXXXXXXXXXXGWLRIY 902
+ K+ W++ + KLWV+V+++K + + F G ++
Sbjct: 1402 LTKMAWQIFSNIDKLWVKVLREKYVKNADFLHLQSQSNCSWGWRSIMKGKDVLAGAIKWN 1461
Query: 901 CALLRMVN*VRFWKD------P*VLGVPCILDVVEADVPSHEINFHVPCYGSLVGWTWDK 740
R +N FW D P CI D+ ++ S W
Sbjct: 1462 VGNGRKIN---FWNDWWVGDGPLASNTDCINQPHMTDIKVEDLTT------SQRRWDTGA 1512
Query: 739 FQHLILLDVREKI-ASICPS*AGDTDLSCWQPSSDGNFTLKSAYKVIASFVNVDACDSYI 563
+++ +++ + + A+ + D W S+ G T+ SAY +IA +I
Sbjct: 1513 LHNILPINMIDMVRATPIAINSEQEDFPSWPHSTTGMVTVSSAYSLIAGHDGDGRSHDWI 1572
Query: 562 FKLV*EWEGPPRIKDLLWRLAHGRLLTNEERACFNSNIDTTCSRYLLESENFMHVLRDCK 383
++ +IK +W++ L+ N ER +C E E H+ R C
Sbjct: 1573 WRAT----CTEKIKLFMWKIVKNGLMVNVERKRRGLADAASCPVCGEEDETLDHLFRRCL 1628
Query: 382 QVLSFWSQLVEPDKWSQFASRRFYSWLKWNLSSQDVGHLLIPWSTMVGVTLDALWRDTNS 203
+ W V P + +SW+K SSQ WS + L LW+ N
Sbjct: 1629 LAEACWDSAVPPLTFQTSNHLHMHSWMKAACSSQQKDGYGTNWSLIFPYILWNLWKARNR 1688
Query: 202 LIFNHKSEIDDNLLQQVIHQARFIYFESQKAIPML----GLPHKKEVDIAWTPPPRLAFK 35
L+F++ ++L + + ES +A +L GL + + W+PP K
Sbjct: 1689 LVFDNNITAPSDILNR-------SFMESSEARCLLAKRTGLQTAFQTWVVWSPPAAGFTK 1741
Query: 34 LNVDGS 17
LN DG+
Sbjct: 1742 LNSDGA 1747
Score = 30.8 bits (68), Expect(2) = 5e-17
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -3
Query: 1539 KVNFHKTHVFFSKNVSREKAHQISGEMNVQETDEIGSYLG 1420
KVNF K+ +F S NV+ I + V + +G+YLG
Sbjct: 1249 KVNFSKSLLFCSSNVNAGLKRAIGSILQVPVAESLGTYLG 1288
>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
gi|7268307|emb|CAB78601.1| reverse transcriptase like
protein [Arabidopsis thaliana]
Length = 929
Score = 74.7 bits (182), Expect(2) = 6e-17
Identities = 53/164 (32%), Positives = 85/164 (51%), Gaps = 5/164 (3%)
Frame = -1
Query: 1328 SLSFAGHVMLAQASVRAIPCYIMQTSLLPASIYEEADKICRDFIWESSQDCSKRHLVSWE 1149
SLS AG + L +A + +IP + M + LLPAS+ E+ DK+ R+F+W S+ + K+HL+SW+
Sbjct: 581 SLSLAGRITLTKAVLMSIPIHTMSSILLPASLLEQLDKVSRNFLWGSTVEKRKQHLLSWK 640
Query: 1148 ETCKPENEGGARLSKSPCLK*SLYDEA--RMENDCSS--SKVVG*SYAEKKYACCVQTIP 981
+ C+P+ GG L S + +L + R+ ND S ++V+ Y +P
Sbjct: 641 KVCRPKAAGGLGLRASKDMNRALLAKVGWRLLNDKVSLWARVLRRKYKVTDVHDSSWLVP 700
Query: 980 RVVN*SFASLTWKAISSSWHRVAANLLCVIKDG-QLGSILERPL 852
+ TW SS+W + L ++G G IL PL
Sbjct: 701 KA--------TW---SSTWRSIGVGL----REGVAKGWILHEPL 729
Score = 40.4 bits (93), Expect(2) = 6e-17
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = -3
Query: 1539 KVNFHKTHVFFSKNVSREKAHQISGEMNVQETDEIGSYLGAL*SIIGRRRNTMLFSSI 1366
KV+ K+ +FFS NVSR+ I+ E + T E+G YLG ++ +R N F +
Sbjct: 511 KVSLEKSKIFFSNNVSRDLEGLITAETGIGSTRELGKYLGM--PVLQKRINKDTFGEV 566
Score = 65.5 bits (158), Expect = 4e-08
Identities = 73/328 (22%), Positives = 126/328 (38%), Gaps = 13/328 (3%)
Frame = -2
Query: 1414 MIHYRKTKEHYAFLLNKMRKKLSGWKAXXXXXXXXXXXXXXXXSGLFLAILCKLPFYRLL 1235
++ R K+ + +L ++ +LSGWK+ L A+L +P + +
Sbjct: 553 VLQKRINKDTFGEVLERVSSRLSGWKSRSLSLAGRIT--------LTKAVLMSIPIHTMS 604
Query: 1234 S-------MRKLTKYAGT-LYGKALRIVVSGI*SLGRKLVNRKMKGGLDFQNLHALNEAY 1079
S + +L K + L+G + + S +K+ K GGL + +N A
Sbjct: 605 SILLPASLLEQLDKVSRNFLWGSTVEKRKQHLLSW-KKVCRPKAAGGLGLRASKDMNRAL 663
Query: 1078 MMKLGWKMIVHPQKLWVEVMQKK----NMHVVFRLFPXXXXXXXXXXXXXXXXXXXXGWL 911
+ K+GW+++ LW V+++K ++H L P W
Sbjct: 664 LAKVGWRLLNDKVSLWARVLRRKYKVTDVHDSSWLVPKATWSST--------------WR 709
Query: 910 RIYCALLRMVN*VRFWKDP*VLGVPCILDVVEADVPSHEINFHVPCYGSLVGWTWDKFQH 731
I L V +P C+L E + E + VGW K
Sbjct: 710 SIGVGLREGVAKGWILHEPLCTRATCLLSPEELNARVEEF------WTEGVGWDMVKLGQ 763
Query: 730 LILLDVREKI-ASICPS*AGDTDLSCWQPSSDGNFTLKSAYKVIASFVNVDACDSYIFKL 554
+ V +++ A + G D WQ +SDG+FT+ SAY ++ C FK
Sbjct: 764 CLPRSVTDRLHAVVIKGVLGLRDRISWQGTSDGDFTVGSAYVLLTQEEESKPCMESFFKR 823
Query: 553 V*EWEGPPRIKDLLWRLAHGRLLTNEER 470
+ P R++ LW + ++TN ER
Sbjct: 824 IWGVIAPERVRVFLWLVGQQVIMTNVER 851