BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00001745
         (1450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523114.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   331   3e-88
ref|NP_001239665.1| uncharacterized protein LOC100790280 [Glycin...   324   4e-86
emb|CAA74889.1| ribonucleoprotein [Pisum sativum] gi|10179830|gb...   295   2e-77
gb|AFK44430.1| unknown [Medicago truncatula]                          291   3e-76
ref|XP_002867645.1| RNA-binding protein cp31 [Arabidopsis lyrata...   288   2e-75

>ref|XP_003523114.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Glycine max]
          Length = 305

 Score =  331 bits (848), Expect = 3e-88
 Identities = 189/308 (61%), Positives = 210/308 (68%), Gaps = 7/308 (2%)
 Frame = +2

Query: 119  MSITAATAFKS--MAESCLLSPPTFALLFNKTXXXXXXXXXXXXXXXXXXXXXXXXXTLT 292
            MSIT++T+FKS  MAESCLLS P+ +L  NKT                         +L 
Sbjct: 1    MSITSSTSFKSLTMAESCLLSSPS-SLFNNKTKPSLFSPPSKPLTLQFSCINSSVSLSLA 59

Query: 293  AKTHRSLFPLFVAHXXXXXXXXXXXXXXXXE---GVSETEASLSDWEPNGXXXXXXXGDF 463
            A+ HRS     VA                 +   G+SET+A LS WEPNG         F
Sbjct: 60   ARAHRSPLVTRVAQTSDWAQQEEDDTATFQDEEQGLSETQAGLSSWEPNGEDAGEE--SF 117

Query: 464  VEPSEDTKLFVGNLPYDVDSQKLAMLFEQAGTVEIAEVIYNRESDQSRGFGFVTMSTVEE 643
             EP E+ KLFVGNLPYDVDSQKLAMLFEQAGTVEIAEVIYNRE+DQSRGFGFVTMSTVEE
Sbjct: 118  AEPPEEAKLFVGNLPYDVDSQKLAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEE 177

Query: 644  AEEAVEKFNRYDYDGRLLTVNKA--XXXXXXXXXXXXXXXXALRVYVGNLPWDVDNTRLE 817
            AE AVEKF+RYD+DGRLLTVNKA                  +L +YVGNLPWDVDNTRLE
Sbjct: 178  AENAVEKFSRYDFDGRLLTVNKASPRGTRPERPPPRHSFEPSLSIYVGNLPWDVDNTRLE 237

Query: 818  QVFSEHGKVLRAQVVSDRETGRSRGFGFVTMSNETEMNDAIAALDGQSLDGRTIRVSVAE 997
            Q+FSEHG V+ A+VV DRET RSRGFGFVTMS+ETEM DA+AALDGQSLDGR IRVSVAE
Sbjct: 238  QIFSEHGNVVNARVVYDRETRRSRGFGFVTMSDETEMKDAVAALDGQSLDGRPIRVSVAE 297

Query: 998  DRPRRGSF 1021
            DRPRRGSF
Sbjct: 298  DRPRRGSF 305


>ref|NP_001239665.1| uncharacterized protein LOC100790280 [Glycine max]
            gi|255644452|gb|ACU22730.1| unknown [Glycine max]
          Length = 290

 Score =  324 bits (830), Expect = 4e-86
 Identities = 184/303 (60%), Positives = 205/303 (67%), Gaps = 2/303 (0%)
 Frame = +2

Query: 119  MSITAATAFKSMAESCLLSPPTFALLFNKTXXXXXXXXXXXXXXXXXXXXXXXXXTLTAK 298
            MSIT+ T    MAESCLLS P+ +L   KT                         +L A 
Sbjct: 1    MSITSLT----MAESCLLSSPS-SLFHTKTKPSLFTPPSKPLTLQFSCLNSSVSLSLAAP 55

Query: 299  THRSLFPLFVAHXXXXXXXXXXXXXXXXEGVSETEASLSDWEPNGXXXXXXXGDFVEPSE 478
            THRS    FVA                 + ++ETEA L  WEPNG         FVEP E
Sbjct: 56   THRSPLVTFVAQTSDWAQQEEE------QSLAETEAGLESWEPNGEDAGDE--SFVEPPE 107

Query: 479  DTKLFVGNLPYDVDSQKLAMLFEQAGTVEIAEVIYNRESDQSRGFGFVTMSTVEEAEEAV 658
            + KLFVGNLPYDVDSQKLAMLFEQAGTVEIAEVIYNRE+DQSRGFGFVTMSTVEEAE AV
Sbjct: 108  EAKLFVGNLPYDVDSQKLAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAESAV 167

Query: 659  EKFNRYDYDGRLLTVNKA--XXXXXXXXXXXXXXXXALRVYVGNLPWDVDNTRLEQVFSE 832
            EKFNRYD DGRLLTVNKA                  +L +YVGNLPWDVDNTRL+Q+FS+
Sbjct: 168  EKFNRYDIDGRLLTVNKASPRGTRPERPPPRRSFESSLSIYVGNLPWDVDNTRLKQIFSK 227

Query: 833  HGKVLRAQVVSDRETGRSRGFGFVTMSNETEMNDAIAALDGQSLDGRTIRVSVAEDRPRR 1012
            HG V+ A+VV DRE+GRSRGFGFVTMS+ETEMNDA+AALDG+SLDGR I+VSVAEDRPRR
Sbjct: 228  HGNVVNARVVYDRESGRSRGFGFVTMSDETEMNDAVAALDGESLDGRAIKVSVAEDRPRR 287

Query: 1013 GSF 1021
            GSF
Sbjct: 288  GSF 290


>emb|CAA74889.1| ribonucleoprotein [Pisum sativum] gi|10179830|gb|AAG13900.1| 33 kDa
            ribonucleoprotein [Pisum sativum]
          Length = 291

 Score =  295 bits (756), Expect = 2e-77
 Identities = 167/254 (65%), Positives = 182/254 (71%), Gaps = 8/254 (3%)
 Frame = +2

Query: 284  TLTAKTHRSLFPLFVAHXXXXXXXXXXXXXXXXEGVSETEASLSDWEPNGXXXXXXX--- 454
            TL+ KT+R+  PLF A                 EGV ETE  L DWEP            
Sbjct: 48   TLSLKTNRAT-PLFAAQEGETLTTE--------EGVVETEG-LIDWEPEAAENETGGEDY 97

Query: 455  --GDFVEPSEDTKLFVGNLPYDVDSQKLAMLFEQAGTVEIAEVIYNRESDQSRGFGFVTM 628
              GDF EPSED KLFVGNLPYDVDS+KLAMLFE AGTVEIAEVIYNRE+DQSRGFGFVTM
Sbjct: 98   AGGDFAEPSEDAKLFVGNLPYDVDSEKLAMLFEPAGTVEIAEVIYNRETDQSRGFGFVTM 157

Query: 629  STVEEAEEAVEKFNRYDYDGRLLTVNKA---XXXXXXXXXXXXXXXXALRVYVGNLPWDV 799
            STVEEAE    KFNRYDY+GR LTVNKA                    LRVYVGNL W++
Sbjct: 158  STVEEAEAGAAKFNRYDYNGRPLTVNKAAPRGSRPEREERPPRTFEPVLRVYVGNLSWEL 217

Query: 800  DNTRLEQVFSEHGKVLRAQVVSDRETGRSRGFGFVTMSNETEMNDAIAALDGQSLDGRTI 979
            D++RLEQVFSEHGKV+ A+VV DRETGRSRGFGFVTMS+E EMNDAIAALDGQ L+GRTI
Sbjct: 218  DDSRLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEKEMNDAIAALDGQILEGRTI 277

Query: 980  RVSVAEDRPRRGSF 1021
            +VSVAEDRPRRGSF
Sbjct: 278  KVSVAEDRPRRGSF 291


>gb|AFK44430.1| unknown [Medicago truncatula]
          Length = 291

 Score =  291 bits (745), Expect = 3e-76
 Identities = 183/324 (56%), Positives = 204/324 (62%), Gaps = 23/324 (7%)
 Frame = +2

Query: 119  MSITAATA-FKS--MAESCLLSP-----PTFALLFNKTXXXXXXXXXXXXXXXXXXXXXX 274
            MSIT+ T  FKS  MAESCLLS      PTF  L +K+                      
Sbjct: 1    MSITSTTPLFKSLTMAESCLLSSQSKSKPTFFSLPSKSLNLH------------------ 42

Query: 275  XXXTLTAKTHRSLF----PLFVAHXXXXXXXXXXXXXXXXEGVSETEASLS-DWEPNGXX 439
                L+ KT+RS+     PLFVA                     + EA LS DWEP    
Sbjct: 43   ----LSLKTNRSISISPSPLFVAQEGDTLTTSL-----------DEEAGLSLDWEPTADA 87

Query: 440  XXXXXGD-------FVEPSEDTKLFVGNLPYDVDSQKLAMLFEQAGTVEIAEVIYNRESD 598
                 G        FVEP ED KLFVGN P+DVDS+KLAMLF QAGTVEIAEVIYNR++D
Sbjct: 88   AETETGADDSAEGYFVEPPEDAKLFVGNFPFDVDSEKLAMLFGQAGTVEIAEVIYNRQTD 147

Query: 599  QSRGFGFVTMSTVEEAEEAVEKFNRYDYDGRLLTVNKAXXXXXXXXXXXXXXXX---ALR 769
             SRGFGFVTM+TVEEAE AVEKFN YDY+GR L VNKA                    LR
Sbjct: 148  LSRGFGFVTMNTVEEAESAVEKFNGYDYNGRSLVVNKASPKGSRPERTERAPRTFEPVLR 207

Query: 770  VYVGNLPWDVDNTRLEQVFSEHGKVLRAQVVSDRETGRSRGFGFVTMSNETEMNDAIAAL 949
            +YV NL W+VDN+RLEQVFSEHGK++ A+VV DRETGRSRGFGFVTMS+ETEMNDAIAAL
Sbjct: 208  IYVANLAWEVDNSRLEQVFSEHGKIVSARVVYDRETGRSRGFGFVTMSDETEMNDAIAAL 267

Query: 950  DGQSLDGRTIRVSVAEDRPRRGSF 1021
            DGQSL+GRTIRVSVAEDRPRRGSF
Sbjct: 268  DGQSLEGRTIRVSVAEDRPRRGSF 291


>ref|XP_002867645.1| RNA-binding protein cp31 [Arabidopsis lyrata subsp. lyrata]
            gi|297313481|gb|EFH43904.1| RNA-binding protein cp31
            [Arabidopsis lyrata subsp. lyrata]
          Length = 305

 Score =  288 bits (738), Expect = 2e-75
 Identities = 160/246 (65%), Positives = 176/246 (71%), Gaps = 2/246 (0%)
 Frame = +2

Query: 284  TLTAKTH--RSLFPLFVAHXXXXXXXXXXXXXXXXEGVSETEASLSDWEPNGXXXXXXXG 457
            +L +KTH  +S F  FVA                   V E E S    +  G        
Sbjct: 65   SLKSKTHLKKSPFVSFVAQTSDWAEEGGEGSV----AVEENEDSFESQDAEGDVSEG--A 118

Query: 458  DFVEPSEDTKLFVGNLPYDVDSQKLAMLFEQAGTVEIAEVIYNRESDQSRGFGFVTMSTV 637
            +F EPSE+ KLFVGNL YDVDSQ LAMLFEQAGTVEIAEVIYNRE+DQSRGFGFVTMSTV
Sbjct: 119  EFPEPSEEAKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTV 178

Query: 638  EEAEEAVEKFNRYDYDGRLLTVNKAXXXXXXXXXXXXXXXXALRVYVGNLPWDVDNTRLE 817
            EEAE AVEKFNRYD +GRLLTVNKA                A RVYVGNLPWDVDN RLE
Sbjct: 179  EEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLE 238

Query: 818  QVFSEHGKVLRAQVVSDRETGRSRGFGFVTMSNETEMNDAIAALDGQSLDGRTIRVSVAE 997
            QVFSEHGKV+ A+VV DRETGRSRGFGFVTMSNE E+NDAIAALDGQ+++GR IRV+VAE
Sbjct: 239  QVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNENELNDAIAALDGQNMEGRAIRVNVAE 298

Query: 998  DRPRRG 1015
            +RPRRG
Sbjct: 299  ERPRRG 304