BLASTX nr result

ID: Glycyrrhiza24_contig00001719 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00001719
         (772 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003589057.1| F-box protein [Medicago truncatula] gi|35547...   277   2e-72
ref|XP_004142896.1| PREDICTED: F-box protein At3g12350-like [Cuc...   254   1e-65
ref|XP_002283336.1| PREDICTED: F-box protein At3g12350 [Vitis vi...   252   5e-65
emb|CAN72848.1| hypothetical protein VITISV_013938 [Vitis vinifera]   252   5e-65
ref|XP_003549378.1| PREDICTED: F-box protein At3g12350-like [Gly...   249   6e-64

>ref|XP_003589057.1| F-box protein [Medicago truncatula] gi|355478105|gb|AES59308.1|
           F-box protein [Medicago truncatula]
          Length = 496

 Score =  277 bits (709), Expect = 2e-72
 Identities = 150/261 (57%), Positives = 170/261 (65%), Gaps = 5/261 (1%)
 Frame = +3

Query: 3   CILSFLGPTEIATFACTSKRFRSLCANDAKLWFTLCDRRWGSKTQISKWGKGKIPYRHLY 182
           CILSFL P EIA+FACTSK+F +LC++DAKLW +LCDRRWGSKTQI KWG+GKI YR+LY
Sbjct: 26  CILSFLCPIEIASFACTSKQFGTLCSDDAKLWLSLCDRRWGSKTQIKKWGEGKILYRNLY 85

Query: 183 NTLHEYDNLIGFWRRSGHGSAAISSPSLLHFEWGPSFLSASRVSPSQPAT----YHVTKT 350
             LHE+DNLIGFWRRSG GSA I SPSL+ FEWG SF++ SRVSP+Q  +    Y V K 
Sbjct: 86  TVLHEWDNLIGFWRRSGPGSAVIESPSLVFFEWGSSFIAGSRVSPTQSESEICGYQVKKV 145

Query: 351 PFLNMSLSEEGHAVNLLDPDGTRPDLNLNLNESELMIPVSVSFMGKTHFVLEEDRFGRXX 530
           PFL M LSE+G  VNLLDP+G R DLN N N SEL IPV+V FMGKTHFVLEE+ FGR  
Sbjct: 146 PFLKMGLSEDGQIVNLLDPNG-RADLNFNGNGSEL-IPVNVCFMGKTHFVLEENVFGRSS 203

Query: 531 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPDQLMTEIYQYFANRTSPGSD-XXXXXXX 707
                                          P   M EIYQ+ ANR SPGSD        
Sbjct: 204 SSSPGKNGGEDCGFGGEDGIGIESGS-----PPDRMLEIYQHLANRVSPGSDRSRRQRRK 258

Query: 708 XXXXXXXXXWEPEHFVKIVNC 770
                    WEPEHFVK+VNC
Sbjct: 259 EKERMARRKWEPEHFVKVVNC 279


>ref|XP_004142896.1| PREDICTED: F-box protein At3g12350-like [Cucumis sativus]
           gi|449482721|ref|XP_004156384.1| PREDICTED: F-box
           protein At3g12350-like [Cucumis sativus]
          Length = 465

 Score =  254 bits (649), Expect = 1e-65
 Identities = 136/275 (49%), Positives = 168/275 (61%), Gaps = 19/275 (6%)
 Frame = +3

Query: 3   CILSFLGPTEIATFACTSKRFRSLCANDAKLWFTLCDRRWGSKTQISKWGKGKIPYRHLY 182
           CILSFL P++IATF+CTSKRF SLC ND KLWFT+CDR+WGSKTQI  WGKGKI YR LY
Sbjct: 26  CILSFLSPSDIATFSCTSKRFVSLCRNDRKLWFTMCDRKWGSKTQIKNWGKGKITYRLLY 85

Query: 183 NTLHEYDNLIGFWRRSGHGSAAISSPSLLHFEWGPSFLSASRVSPSQPATYHVTKTPFLN 362
            TLH+++NLIGFWRRSG  + +++SP L+ FEWGP FL+  RVSPS+  TY V K+PFL 
Sbjct: 86  KTLHQWENLIGFWRRSGSSTISVTSPPLVFFEWGPDFLAGCRVSPSKNGTYDVFKSPFLW 145

Query: 363 MSLSEEGHAVNLLDPDGTRPDLN--LNLNESEL----MIPVSVSFMGKTHFVLEE----- 509
           M+LS EG A++ ++ DG         +L ES+     +IP+ +SFMGK HFV+EE     
Sbjct: 146 MTLSSEGQAMSFINLDGRSEFAGKFADLGESDFSDCDLIPIDLSFMGKNHFVIEENLAFP 205

Query: 510 -----DRFGR-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPDQLMTEIYQYFANRT 671
                +R  +                                 LPD+LM+EIYQ+FANRT
Sbjct: 206 YPTSPERSKKGFRRSSSSANLLAEDGAAAITDVSRVESGSPGSLPDRLMSEIYQHFANRT 265

Query: 672 SPGSD--XXXXXXXXXXXXXXXXWEPEHFVKIVNC 770
           SPG D                  WEPEHFVKIVNC
Sbjct: 266 SPGGDRASRRQRRRERERLGKRKWEPEHFVKIVNC 300


>ref|XP_002283336.1| PREDICTED: F-box protein At3g12350 [Vitis vinifera]
          Length = 469

 Score =  252 bits (644), Expect = 5e-65
 Identities = 138/274 (50%), Positives = 159/274 (58%), Gaps = 18/274 (6%)
 Frame = +3

Query: 3   CILSFLGPTEIATFACTSKRFRSLCANDAKLWFTLCDRRWGSKTQISKWGKGKIPYRHLY 182
           CILSFL P+EIATFACTSKRF SLC  D+KLWFTLCDRRWGSKTQI KWG GKI YR LY
Sbjct: 24  CILSFLTPSEIATFACTSKRFLSLCTCDSKLWFTLCDRRWGSKTQIKKWGSGKITYRLLY 83

Query: 183 NTLHEYDNLIGFWRRSGHGSAAISSPSLLHFEWGPSFLSASRVSPSQPATYHVTKTPFLN 362
            TL E++NLIGFWRRSG  +  ++SP L+ FEW PSF+  SRVSPS+  TYHV K PFL 
Sbjct: 84  RTLIEWENLIGFWRRSGQVTLGVASPPLIFFEWCPSFIIGSRVSPSRLGTYHVIKAPFLC 143

Query: 363 MSLSEEGHAVNLLDPDGTRPDLNLNLNESEL------MIPVSVSFMGKTHFVLEE----- 509
           MS++ EG  +N LDPDG        +N  +       +IPV VSFMGK H V+EE     
Sbjct: 144 MSITPEGETMNFLDPDGKIESSEDFVNAVQAGFLENDLIPVHVSFMGKNHVVVEENLSFT 203

Query: 510 -----DRFGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPDQLMTEIYQYFANRTS 674
                +                                    LPD+ M+EIYQYFANRTS
Sbjct: 204 SLNSQEPKNTGFRRSSSSGNVRAEDIGVVEDMIGAESGSPGSLPDRFMSEIYQYFANRTS 263

Query: 675 PGSD--XXXXXXXXXXXXXXXXWEPEHFVKIVNC 770
           PG +                  W PEHFVKIVNC
Sbjct: 264 PGGERASRRQRKREKARQGRRKWMPEHFVKIVNC 297


>emb|CAN72848.1| hypothetical protein VITISV_013938 [Vitis vinifera]
          Length = 469

 Score =  252 bits (644), Expect = 5e-65
 Identities = 138/274 (50%), Positives = 159/274 (58%), Gaps = 18/274 (6%)
 Frame = +3

Query: 3   CILSFLGPTEIATFACTSKRFRSLCANDAKLWFTLCDRRWGSKTQISKWGKGKIPYRHLY 182
           CILSFL P+EIATFACTSKRF SLC  D+KLWFTLCDRRWGSKTQI KWG GKI YR LY
Sbjct: 24  CILSFLTPSEIATFACTSKRFLSLCTCDSKLWFTLCDRRWGSKTQIKKWGSGKITYRLLY 83

Query: 183 NTLHEYDNLIGFWRRSGHGSAAISSPSLLHFEWGPSFLSASRVSPSQPATYHVTKTPFLN 362
            TL E++NLIGFWRRSG  +  ++SP L+ FEW PSF+  SRVSPS+  TYHV K PFL 
Sbjct: 84  RTLIEWENLIGFWRRSGQVTLGVASPPLIFFEWCPSFIIGSRVSPSRLGTYHVIKAPFLC 143

Query: 363 MSLSEEGHAVNLLDPDGTRPDLNLNLNESEL------MIPVSVSFMGKTHFVLEE----- 509
           MS++ EG  +N LDPDG        +N  +       +IPV VSFMGK H V+EE     
Sbjct: 144 MSITPEGETMNFLDPDGKIESSEDFVNAVQAGFLENDLIPVHVSFMGKNHVVVEENLSFT 203

Query: 510 -----DRFGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPDQLMTEIYQYFANRTS 674
                +                                    LPD+ M+EIYQYFANRTS
Sbjct: 204 SLNSQEPKNTGFRRSSSSGNVRAEDIGVVEDMIGAESGSPGSLPDRFMSEIYQYFANRTS 263

Query: 675 PGSD--XXXXXXXXXXXXXXXXWEPEHFVKIVNC 770
           PG +                  W PEHFVKIVNC
Sbjct: 264 PGGERASRRQRKREKARQGRRKWMPEHFVKIVNC 297


>ref|XP_003549378.1| PREDICTED: F-box protein At3g12350-like [Glycine max]
          Length = 444

 Score =  249 bits (635), Expect = 6e-64
 Identities = 139/264 (52%), Positives = 161/264 (60%), Gaps = 8/264 (3%)
 Frame = +3

Query: 3   CILSFLGPTEIATFACTSKRFRSLCANDAKLWFTLCDRRWGSKTQISKWGKGKIP---YR 173
           CILSFLGP EIAT ACTSKR  SLCA D+KLWF++C+RRWGS T+I++W +GK P   ++
Sbjct: 22  CILSFLGPPEIATLACTSKRMGSLCATDSKLWFSMCERRWGSYTRITQWAQGKNPTLSFK 81

Query: 174 HLYNTLHEYDNLIGFWRRSGHGSAAISSPSLLHFEWGPSFLSASRVSP----SQPATYHV 341
           HLYNTLH ++NL+GFWRRSG G      PSLL FEWGPSF+SASRVSP    S   TY V
Sbjct: 82  HLYNTLHRWENLLGFWRRSGTG-----IPSLLFFEWGPSFISASRVSPSASDSNSVTYGV 136

Query: 342 TKTPFLNMSLSEEGHAVNLLDPDGTRPDLNLNLNESELMIPVSVSFMGKTHFVLEEDRFG 521
           TKTPFL MSLSEEGH V  LDPDG R D    +     ++ V VSFMGKTH V+EE R  
Sbjct: 137 TKTPFLWMSLSEEGHVVTYLDPDG-RSDFKPEIRSE--LVAVDVSFMGKTHLVVEEKR-- 191

Query: 522 RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPDQLMTEIYQYFANRTSPGSD-XXXX 698
                                             P++LM EIYQ+FAN  SPGSD     
Sbjct: 192 -------------VRGGACHDCGDDVVVVESGSPPEKLMAEIYQHFANPRSPGSDRSRRQ 238

Query: 699 XXXXXXXXXXXXWEPEHFVKIVNC 770
                       WEP+HFVKIVNC
Sbjct: 239 RRREKERLAGRKWEPQHFVKIVNC 262


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