BLASTX nr result

ID: Glycyrrhiza24_contig00001694 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00001694
         (1358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003590481.1| 30 kDa ribonucleoprotein [Medicago truncatul...   403   e-110
gb|ACJ85252.1| unknown [Medicago truncatula]                          401   e-109
ref|XP_003535181.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   395   e-107
ref|NP_001240946.1| uncharacterized protein LOC100812934 [Glycin...   383   e-104
gb|AFK37653.1| unknown [Lotus japonicus]                              365   1e-98

>ref|XP_003590481.1| 30 kDa ribonucleoprotein [Medicago truncatula]
           gi|355479529|gb|AES60732.1| 30 kDa ribonucleoprotein
           [Medicago truncatula] gi|388503166|gb|AFK39649.1|
           unknown [Medicago truncatula]
          Length = 280

 Score =  403 bits (1036), Expect = e-110
 Identities = 219/285 (76%), Positives = 240/285 (84%), Gaps = 15/285 (5%)
 Frame = +1

Query: 28  MSTTAASLALPTLQTRKPLCSSPQCLSS--RFSLNPNFKPFSIPSASLRPTLSLSCRFVS 201
           MST+A SL LP+L T+    +SPQC SS    SLNPNFKPFS  S SLRP+LS+S RF+S
Sbjct: 1   MSTSATSLVLPSLFTK----NSPQCFSSLPSLSLNPNFKPFSFSSVSLRPSLSISHRFIS 56

Query: 202 RVALSSEFDQEEDTFSDGD-TPNYSRDLRLFVGNLPFSVDSAQLAELFENAGNVEMVEVI 378
           RVA+SSEFDQEEDTF DGD TP+YS + RLFVGNLPFSVDSAQLAE+FENAG+VEMVEVI
Sbjct: 57  RVAVSSEFDQEEDTFDDGDDTPSYSPNQRLFVGNLPFSVDSAQLAEIFENAGDVEMVEVI 116

Query: 379 YDKMTGRSRGFGFVTMSSAVEVEAAAQQFNGYELDGRPLRVNAG-PPPPRTENSRFG--- 546
           YDK TGRSRGFGFVTMSSA EVEAAAQQ NGY +DGR LRVNAG PPPPR+ENSRFG   
Sbjct: 117 YDKSTGRSRGFGFVTMSSAAEVEAAAQQLNGYVVDGRELRVNAGPPPPPRSENSRFGENP 176

Query: 547 --------GPSRGRSPSDNENRVHVGNLAWGVDNLALESLFREQGKVVEAKVIYDRESGR 702
                   GP RG S SD +NRVHVGNLAWGVDNLALESLF EQG+V+EAKVIYDRESGR
Sbjct: 177 RFGGDRPRGPPRGGS-SDGDNRVHVGNLAWGVDNLALESLFGEQGQVLEAKVIYDRESGR 235

Query: 703 SRGFGFVTFSSPDEVNSAIQSLDGADLNGRAIRVSLADGKPKRQF 837
           SRGFGFVTFSS DEV+SAI++LDGADLNGRAIRVS AD +PKRQF
Sbjct: 236 SRGFGFVTFSSADEVDSAIRTLDGADLNGRAIRVSPADSRPKRQF 280


>gb|ACJ85252.1| unknown [Medicago truncatula]
          Length = 280

 Score =  401 bits (1031), Expect = e-109
 Identities = 218/285 (76%), Positives = 240/285 (84%), Gaps = 15/285 (5%)
 Frame = +1

Query: 28  MSTTAASLALPTLQTRKPLCSSPQCLSS--RFSLNPNFKPFSIPSASLRPTLSLSCRFVS 201
           MST+A SL LP+L T+    +SPQC SS    SLNPNFKPFS  S SLRP+LS+S RF+S
Sbjct: 1   MSTSATSLVLPSLFTK----NSPQCFSSLPSLSLNPNFKPFSFSSVSLRPSLSISHRFIS 56

Query: 202 RVALSSEFDQEEDTFSDGD-TPNYSRDLRLFVGNLPFSVDSAQLAELFENAGNVEMVEVI 378
           RVA+SSEFDQEEDTF DGD TP+YS + RLFVG+LPFSVDSAQLAE+FENAG+VEMVEVI
Sbjct: 57  RVAVSSEFDQEEDTFDDGDDTPSYSPNQRLFVGSLPFSVDSAQLAEIFENAGDVEMVEVI 116

Query: 379 YDKMTGRSRGFGFVTMSSAVEVEAAAQQFNGYELDGRPLRVNAGPPPP-RTENSRFG--- 546
           YDK TGRSRGFGFVTMSSA EVEAAAQQ NGY +DGR LRVNAGPPPP R+ENSRFG   
Sbjct: 117 YDKSTGRSRGFGFVTMSSAAEVEAAAQQLNGYVVDGRELRVNAGPPPPPRSENSRFGENP 176

Query: 547 --------GPSRGRSPSDNENRVHVGNLAWGVDNLALESLFREQGKVVEAKVIYDRESGR 702
                   GP RG S SD +NRVHVGNLAWGVDNLALESLF EQG+V+EAKVIYDRESGR
Sbjct: 177 RFGGDRPRGPPRGGS-SDGDNRVHVGNLAWGVDNLALESLFGEQGQVLEAKVIYDRESGR 235

Query: 703 SRGFGFVTFSSPDEVNSAIQSLDGADLNGRAIRVSLADGKPKRQF 837
           SRGFGFVTFSS DEV+SAI++LDGADLNGRAIRVS AD +PKRQF
Sbjct: 236 SRGFGFVTFSSADEVDSAIRTLDGADLNGRAIRVSPADSRPKRQF 280


>ref|XP_003535181.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Glycine
           max]
          Length = 275

 Score =  395 bits (1015), Expect = e-107
 Identities = 209/275 (76%), Positives = 232/275 (84%), Gaps = 7/275 (2%)
 Frame = +1

Query: 28  MSTTAASLALPTL--QTRKPLCSSPQCLSSRFSLNPNFKPFSIPSASLRPTLSLSCRFVS 201
           MST+AASLALPTL  +TR+PLCS PQC SS  SL PN KP SI +  L+PT   S RFV 
Sbjct: 1   MSTSAASLALPTLTLRTRQPLCS-PQCFSSSLSLTPNNKPISISAVFLKPTTLSSSRFVP 59

Query: 202 RVALSSEFDQEEDTFSDGDTPNYSRDLRLFVGNLPFSVDSAQLAELFENAGNVEMVEVIY 381
            V +SS+  QEEDTFSDGD P++S DL+LFVGNLPF+VDSAQLAELFE+AGNVE+VEVIY
Sbjct: 60  HVVVSSDLGQEEDTFSDGDGPSFSPDLKLFVGNLPFNVDSAQLAELFESAGNVEVVEVIY 119

Query: 382 DKMTGRSRGFGFVTMSSAVEVEAAAQQFNGYELDGRPLRVNAGPPPPRTENS-RFGG--- 549
           DK TGRSRGFGFVTMSS  E EAAAQQFNGYELDGR LRVN+GPPP R E++ RF G   
Sbjct: 120 DKTTGRSRGFGFVTMSSVEEAEAAAQQFNGYELDGRALRVNSGPPPARNESAPRFRGGSS 179

Query: 550 -PSRGRSPSDNENRVHVGNLAWGVDNLALESLFREQGKVVEAKVIYDRESGRSRGFGFVT 726
             SRG  PSD+ENRVHV NLAWGVDN+AL+SLFREQG V+EA+VIYDRESGRSRGFGFVT
Sbjct: 180 FGSRGGGPSDSENRVHVSNLAWGVDNVALKSLFREQGNVLEARVIYDRESGRSRGFGFVT 239

Query: 727 FSSPDEVNSAIQSLDGADLNGRAIRVSLADGKPKR 831
           FSSPDEVNSAIQSL+G DLNGRAIRVSLAD KPK+
Sbjct: 240 FSSPDEVNSAIQSLNGVDLNGRAIRVSLADSKPKQ 274


>ref|NP_001240946.1| uncharacterized protein LOC100812934 [Glycine max]
           gi|255639723|gb|ACU20155.1| unknown [Glycine max]
          Length = 279

 Score =  383 bits (983), Expect = e-104
 Identities = 210/282 (74%), Positives = 233/282 (82%), Gaps = 14/282 (4%)
 Frame = +1

Query: 28  MSTTAASLALPTL--QTRKPLCSSPQCLSSRFSLNPNFKPFSIPSASLRPTLS------L 183
           MST+AASLALPTL  +TR+PLCS PQC SS  SL PN KP SI +  L+ TLS      L
Sbjct: 1   MSTSAASLALPTLTLRTRQPLCS-PQCFSSSLSLTPNSKPISISAVFLKTTLSSSSPLSL 59

Query: 184 SCRFVSRVALSSEFDQEEDTFSDGDTPNYSRDLRLFVGNLPFSVDSAQLAELFENAGNVE 363
           S RFV  V++    +QEEDTF DGD P++SRDL+LFVGNLPFSVDSA+LAELFE+AGNVE
Sbjct: 60  SSRFVPHVSV---LEQEEDTFGDGDGPSFSRDLKLFVGNLPFSVDSARLAELFESAGNVE 116

Query: 364 MVEVIYDKMTGRSRGFGFVTMSSAVEVEAAAQQFNGYELDGRPLRVNAGPPPPRTENS-R 540
           +VEVIYDK TGRSRGFGFVTMSS  E EAAA+QFNGYELDGR LRVN+GPPP R E++ R
Sbjct: 117 VVEVIYDKTTGRSRGFGFVTMSSVEEAEAAAKQFNGYELDGRSLRVNSGPPPARNESAPR 176

Query: 541 FGG----PSRGRSPSDNENRVHVGNLAWGVDNLALESLFREQG-KVVEAKVIYDRESGRS 705
           F G     SRG  PSD+ENRVHVGNLAWGVD++ALESLFREQG KV+EA+VIYDRESGRS
Sbjct: 177 FRGGSSFGSRGGGPSDSENRVHVGNLAWGVDDVALESLFREQGKKVLEARVIYDRESGRS 236

Query: 706 RGFGFVTFSSPDEVNSAIQSLDGADLNGRAIRVSLADGKPKR 831
           RGFGFVTF SPDEV SAIQSLDG DLNGRAIRVSLAD KPKR
Sbjct: 237 RGFGFVTFGSPDEVKSAIQSLDGVDLNGRAIRVSLADSKPKR 278


>gb|AFK37653.1| unknown [Lotus japonicus]
          Length = 302

 Score =  365 bits (937), Expect = 1e-98
 Identities = 210/303 (69%), Positives = 233/303 (76%), Gaps = 33/303 (10%)
 Frame = +1

Query: 28  MSTTAA-SLALPTLQTRKPLCSSPQCLSSRFSLNPNFKPFSIPSASLRPTLSLSC-RFVS 201
           MSTT+A SLALP LQTR+PL SS Q LSS F LNPNFK  SI +  L  TLSLS  RFV+
Sbjct: 1   MSTTSATSLALPILQTRQPLGSS-QRLSSSFCLNPNFKSISISAVFLPSTLSLSSSRFVT 59

Query: 202 RVALSSEFDQEEDTFSD-GDTPNYSRDLRLFVGNLPFSVDSAQLAELFENAGNVEMVEVI 378
           RVA+SSEFDQEEDTFSD  +T +++ D ++FVGNLPFSVDSAQLAELF++AGNVE+VEVI
Sbjct: 60  RVAVSSEFDQEEDTFSDDAETRSFAPDHKVFVGNLPFSVDSAQLAELFQDAGNVEVVEVI 119

Query: 379 YDKMTGRSRGFGFVTMSSAVEVEAAAQQFNGYELDGRPLRVNAGPPP----------PRT 528
           YDK TG SRGF FVTMSSA E E AAQQFN YEL+GR LRVN+GPPP          PR 
Sbjct: 120 YDKTTGNSRGFAFVTMSSAAEAEVAAQQFNNYELEGRALRVNSGPPPKNENRGFNENPRF 179

Query: 529 ENSRF----------------GGPSRGR----SPSDNENRVHVGNLAWGVDNLALESLFR 648
            N+ F                GG S G     S S +ENRVHVGNLAWGVDN ALESLFR
Sbjct: 180 RNNSFNRGGSDSYRGGSDGYRGGGSDGYRGGGSSSYSENRVHVGNLAWGVDNAALESLFR 239

Query: 649 EQGKVVEAKVIYDRESGRSRGFGFVTFSSPDEVNSAIQSLDGADLNGRAIRVSLADGKPK 828
           EQG+VV+AKVIYDRESGRSRGFGFVTFSSPDEVNSAI+SLDGADLNGRAI+VS AD KPK
Sbjct: 240 EQGRVVDAKVIYDRESGRSRGFGFVTFSSPDEVNSAIRSLDGADLNGRAIKVSQADSKPK 299

Query: 829 RQF 837
           R+F
Sbjct: 300 REF 302


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