BLASTX nr result

ID: Glycyrrhiza24_contig00001681 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00001681
         (1653 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606020.1| F-box family protein [Medicago truncatula] g...   346   9e-93
ref|XP_003526558.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...   325   2e-86
ref|XP_003608305.1| F-box/LRR-repeat protein [Medicago truncatul...   291   3e-76
ref|XP_003602875.1| FBD-associated F-box protein [Medicago trunc...   280   6e-73
ref|XP_003608293.1| FBD-associated F-box protein [Medicago trunc...   271   5e-70

>ref|XP_003606020.1| F-box family protein [Medicago truncatula]
            gi|357476013|ref|XP_003608292.1| F-box family protein
            [Medicago truncatula] gi|355507075|gb|AES88217.1| F-box
            family protein [Medicago truncatula]
            gi|355509347|gb|AES90489.1| F-box family protein
            [Medicago truncatula]
          Length = 489

 Score =  346 bits (888), Expect = 9e-93
 Identities = 194/321 (60%), Positives = 225/321 (70%), Gaps = 4/321 (1%)
 Frame = +3

Query: 222  MSNSVGE--IMVPPKAKRGKHDESEDEEIRDRLSDLPDCVLLHVLSFLNTKYAVRTCVLS 395
            MSNS  E  +M+P K ++ K  +  +EE  D LSDLPDCV+LH+LSFLN K AVRTC+LS
Sbjct: 1    MSNSAVEDDLMIPSKLRKTKKLKQGNEE--DNLSDLPDCVILHILSFLNAKEAVRTCILS 58

Query: 396  TRWKHLWKHIPTLILHSSDFWTFKGFAKFVSMILSLRDGSTALQGLDFRSRGLVEPDLLK 575
             RWK++WK +PTL+LHSSDF TFK F KFVS ILS RDG+ ALQ LDF   G +EP LLK
Sbjct: 59   NRWKNVWKCVPTLVLHSSDFSTFKNFTKFVSKILSHRDGTIALQELDFERVGSIEPHLLK 118

Query: 576  RIVKYVISHNVQRLGISLHCDIQDILPCFXXXXXXXXXXXXVYPKDRS--GKPLFPKSLN 749
            RIV Y  SHNVQRLGIS+  DI  ILPC             V PK R   G+ LFPKSL+
Sbjct: 119  RIVNYAFSHNVQRLGISVKGDICHILPCVSSCRTLTSLKLSVSPKGRHNYGRTLFPKSLD 178

Query: 750  LPALTSLDLVNFAFCASDNCRACAEPFSAFIRLKSLILQRCTVRDAKILCISSRTLVNLT 929
            LPALTSL L NF FCASD  R   EPFS F +L SL++  CTV+DA+ILCI S TLVNLT
Sbjct: 179  LPALTSLHLGNFVFCASDKGR--TEPFSGFNKLNSLVIDNCTVKDAQILCILSETLVNLT 236

Query: 930  MQSNHASEFFEIELSAPSLCSFAFTGTPRQKLCGRNLSSVTQVNIDAVMXXXXXXXXXXX 1109
            M+ NH+S+ ++IELSAPSL +FAFTGTP QKLCG NLSSV QVNIDA M           
Sbjct: 237  MR-NHSSDVYKIELSAPSLSTFAFTGTPYQKLCGSNLSSVKQVNIDAEMLSNYTEPPLVL 295

Query: 1110 XXXXXXXAHIKSLTVTASTLQ 1172
                   A+IKSLTV+ASTLQ
Sbjct: 296  LSWLLELANIKSLTVSASTLQ 316


>ref|XP_003526558.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g78750-like [Glycine max]
          Length = 384

 Score =  325 bits (833), Expect = 2e-86
 Identities = 173/305 (56%), Positives = 210/305 (68%), Gaps = 2/305 (0%)
 Frame = +3

Query: 264  KRGKHDESEDEEIRDRLSDLPDCVLLHVLSFLNTKYAVRTCVLSTRWKHLWKHIPTLILH 443
            KR K   SE     DRLSDLP+CVLLH+L+FLN K+AVRTCVLSTRWK LWK +PTLILH
Sbjct: 2    KRRKRSHSEGRNEEDRLSDLPECVLLHILTFLNAKHAVRTCVLSTRWKDLWKRLPTLILH 61

Query: 444  SSDFWTFKGFAKFVSMILSLRDGSTALQGLDFRSRGLVEPDLLKRIVKYVISHNVQRLGI 623
            SSDFWTFKGF KFVS +LSLRD S AL  LDF   G +EP LLKRIVKY +SHNV++LGI
Sbjct: 62   SSDFWTFKGFTKFVSRLLSLRDASLALLKLDFERHGCIEPQLLKRIVKYAVSHNVRQLGI 121

Query: 624  SLHCDIQDILPCFXXXXXXXXXXXXVYPKDR-SGKPLFPKSLNLPALTSLDLVNFAFC-A 797
            S+ CDI+D+  C             V P+    G  LFPKSLNL ALT+L L +F FC  
Sbjct: 122  SVKCDIRDVPQCVFSCQTLTSLKLSVCPRGYIYGSTLFPKSLNLTALTTLHLQHFTFCKG 181

Query: 798  SDNCRACAEPFSAFIRLKSLILQRCTVRDAKILCISSRTLVNLTMQSNHASEFFEIELSA 977
             D+    AEPF A  RL  L +  CTV+DA+ILCISS TLV+LTM+S+ + +F++I LS 
Sbjct: 182  DDDDDDMAEPFYACRRLCDLTIDYCTVKDARILCISSATLVSLTMRSDQSGDFYKIVLST 241

Query: 978  PSLCSFAFTGTPRQKLCGRNLSSVTQVNIDAVMXXXXXXXXXXXXXXXXXXAHIKSLTVT 1157
            P+LC+FAFTG P Q+L G NLSS+ +V+IDA +                  A++KSLTV+
Sbjct: 242  PNLCAFAFTGAPYQQLLGSNLSSLERVSIDAEIWSTSLESPLILLSWLLELANVKSLTVS 301

Query: 1158 ASTLQ 1172
            ASTLQ
Sbjct: 302  ASTLQ 306


>ref|XP_003608305.1| F-box/LRR-repeat protein [Medicago truncatula]
            gi|355509360|gb|AES90502.1| F-box/LRR-repeat protein
            [Medicago truncatula]
          Length = 482

 Score =  291 bits (746), Expect = 3e-76
 Identities = 163/308 (52%), Positives = 203/308 (65%), Gaps = 5/308 (1%)
 Frame = +3

Query: 264  KRGKHDESEDEEIRDRLSDLPDCVLLHVLSFLNTKYAVRTCVLSTRWKHLWKHIPTLILH 443
            KR K +   +EE  DRLSDLPD ++LH+LSFLNTK+ VRTCVLS RW+HLWK IPTL+L+
Sbjct: 21   KRRKCENQSNEESEDRLSDLPDGIILHILSFLNTKHVVRTCVLSKRWRHLWKRIPTLMLY 80

Query: 444  SSDFWTFKGFAKFVSMILSLRDGSTALQGLDFRSRGLVEPDLLKRIVKYVISHN--VQRL 617
            +S F T K FA FVS IL+LRD STAL  LD    G +EP LLK+I+ YV SHN  +Q L
Sbjct: 81   ASRFSTVKQFAMFVSNILTLRDTSTALHALDLDRHGNIEPQLLKKILNYVSSHNTHLQDL 140

Query: 618  GISLHCDIQDILPCFXXXXXXXXXXXXVYPKD---RSGKPLFPKSLNLPALTSLDLVNFA 788
            GIS++ D   I+ C             +YPKD    +   LFPKSLNLP LT+L L NF 
Sbjct: 141  GISVNGDCGLIMSCVSSCRALTSLMLSIYPKDGICSNSGILFPKSLNLPTLTNLYLTNFN 200

Query: 789  FCASDNCRACAEPFSAFIRLKSLILQRCTVRDAKILCISSRTLVNLTMQSNHASEFFEIE 968
            FC  +N   CAEPF AF +L SL+++ C VRDA+IL ISS TLVN  M+ N++ +F +IE
Sbjct: 201  FCGGEN--GCAEPFLAFPKLTSLVIRSCRVRDAQILRISSETLVNFKMR-NYSEDFAKIE 257

Query: 969  LSAPSLCSFAFTGTPRQKLCGRNLSSVTQVNIDAVMXXXXXXXXXXXXXXXXXXAHIKSL 1148
            L APSLC+F FTGTP QK+CG  LSSV QV I A M                  A++KSL
Sbjct: 258  LCAPSLCTFTFTGTPVQKICGSGLSSVKQVKIKAEMFSRWDEPPLILFDWLLNLANVKSL 317

Query: 1149 TVTASTLQ 1172
             V+++TL+
Sbjct: 318  MVSSTTLR 325


>ref|XP_003602875.1| FBD-associated F-box protein [Medicago truncatula]
            gi|355491923|gb|AES73126.1| FBD-associated F-box protein
            [Medicago truncatula]
          Length = 403

 Score =  280 bits (717), Expect = 6e-73
 Identities = 165/318 (51%), Positives = 200/318 (62%), Gaps = 1/318 (0%)
 Frame = +3

Query: 222  MSNSVGEIMVPPKAKRGKHDESEDEEIRDRLSDLPDCVLLHVLSFLNTKYAVRTCVLSTR 401
            MSNS  EIM PP +KR K ++SE+E   DRLSDL D ++LH+LSFLN K AV TC+LS R
Sbjct: 1    MSNSAEEIMNPPSSKRLKLNDSENE---DRLSDLHDYIILHILSFLNAKDAVGTCILSPR 57

Query: 402  WKHLWKHIPTLILHSSDFWTFKGFAKFVSMILSLRDGSTALQGLDFRSRGLVEPDLLKRI 581
            +K LWK +P L L S DF TFK F  FVS +LSLRD S AL  L++   G +EP  LK++
Sbjct: 58   YKDLWKQLPNLTLCSYDFRTFKIFTNFVSKVLSLRDSSIALHALEYSKSGCIEPRQLKKV 117

Query: 582  VKYVISHNVQRLGISLHCDIQDILPCFXXXXXXXXXXXXVYPK-DRSGKPLFPKSLNLPA 758
            V Y ISHNVQ L +S  CDI+ I                 YP+ D   K LFPKSLNLPA
Sbjct: 118  VNYAISHNVQELKLSYLCDIELISNSIFSCKTLTCLKLYAYPRTDIKEKTLFPKSLNLPA 177

Query: 759  LTSLDLVNFAFCASDNCRACAEPFSAFIRLKSLILQRCTVRDAKILCISSRTLVNLTMQS 938
            LT L L NFAFC SDN     EPFS F RL SL+L  C ++DA  LCISS TLVN T++S
Sbjct: 178  LTILHLGNFAFCPSDN-NPQVEPFSTFKRLNSLVLYNCALKDAVTLCISSATLVNFTVRS 236

Query: 939  NHASEFFEIELSAPSLCSFAFTGTPRQKLCGRNLSSVTQVNIDAVMXXXXXXXXXXXXXX 1118
             ++ ++++IEL AP L +FAF G P QKL G +LS V  V+IDA +              
Sbjct: 237  -YSYDYYKIELCAPCLGTFAFIGKPFQKLSGSSLSYVKHVDIDAEILSMEMEPPLFLLNW 295

Query: 1119 XXXXAHIKSLTVTASTLQ 1172
                 + KSLTVTASTLQ
Sbjct: 296  LFKLTNTKSLTVTASTLQ 313



 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 24/33 (72%), Positives = 31/33 (93%)
 Frame = +2

Query: 1298 FKAGLEPSPPIPDEVVDFLLQNSPSAEVHIIDC 1396
            FKAGLEPS PIPD +++FLLQNSPSA+V+++DC
Sbjct: 371  FKAGLEPSAPIPDGIINFLLQNSPSAQVYMVDC 403


>ref|XP_003608293.1| FBD-associated F-box protein [Medicago truncatula]
            gi|355509348|gb|AES90490.1| FBD-associated F-box protein
            [Medicago truncatula]
          Length = 798

 Score =  271 bits (692), Expect = 5e-70
 Identities = 162/329 (49%), Positives = 209/329 (63%), Gaps = 12/329 (3%)
 Frame = +3

Query: 222  MSNSVGEIMVPPKAKRGKHDESEDEEIRDRLSDLPDCVLLHVLSFLNTKYAVRTCVLSTR 401
            MS SV E+M+PP  KR + D   +EE +DRL+DLPDCV+LH+LSFL +K+ V+T +LSTR
Sbjct: 1    MSKSVDEVMIPPD-KRVRRD---NEENQDRLTDLPDCVILHILSFLKSKFVVQTSILSTR 56

Query: 402  WKHLWKHIPTLILHSSDFWTFKGFAKFVSMILSLRDGSTALQGLDFRSRGLVEPDLLKRI 581
            WKHLWK IPTL+LHSSDF T K F+ FVS IL+ RD STAL  LD    G +E  LLK I
Sbjct: 57   WKHLWKRIPTLMLHSSDFSTKKLFSVFVSQILANRDRSTALHSLDLERHGKIETYLLKMI 116

Query: 582  VKYVISHN--VQRLGISLHCDIQDILPCFXXXXXXXXXXXXVYPKDRSG---KPLFPKSL 746
            +KY+ SHN  +Q+LGI +  D   IL C             V  + RSG   + LFPKSL
Sbjct: 117  LKYICSHNTHIQQLGIHVTADGCPILSCVSKCRTLTSLKLIVDHR-RSGNQTETLFPKSL 175

Query: 747  NLPALTSLDLVNFAFCASDNCRACAEPFSAFIRLKSLILQRCTVRDAKILCISSRTLVNL 926
            NLP LT+LDL +F+FC  +N   CAEPFSAF +L SL++  C V+DA+IL ISS TLVN 
Sbjct: 176  NLPLLTNLDLSHFSFCGGEN--GCAEPFSAFPKLNSLVISGCKVKDAQILSISSETLVNF 233

Query: 927  TMQSNHASEFFEIELSAPSLCSFAFTGTPRQKLCGRNLSSVTQVNIDAVM-------XXX 1085
             M    +S   +IELS PSLC+F F+G   QK+CG +L SV ++NI+  +          
Sbjct: 234  AMH-YCSSRIAKIELSVPSLCTFTFSGMLVQKICGSSLFSVKKININPFVSLAPEDYALA 292

Query: 1086 XXXXXXXXXXXXXXXAHIKSLTVTASTLQ 1172
                           A+++SL VT++TLQ
Sbjct: 293  LEDYSLVLLSWLQDLANVESLAVTSTTLQ 321


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