BLASTX nr result

ID: Glycyrrhiza24_contig00001610 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00001610
         (1117 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237870.1| uncharacterized protein LOC100500169 [Glycin...   185   2e-44
gb|AFK34182.1| unknown [Lotus japonicus]                              173   6e-41
ref|XP_003537627.1| PREDICTED: LOW QUALITY PROTEIN: histone H1-l...   168   3e-39
dbj|BAC53940.1| stress-inducible H1 histone-like protein [Nicoti...   166   7e-39
gb|AAF64525.1|AF253416_1 histone H1 variant [Solanum chilense]        166   1e-38

>ref|NP_001237870.1| uncharacterized protein LOC100500169 [Glycine max]
           gi|255629522|gb|ACU15107.1| unknown [Glycine max]
          Length = 202

 Score =  185 bits (470), Expect = 2e-44
 Identities = 103/157 (65%), Positives = 114/157 (72%), Gaps = 6/157 (3%)
 Frame = +2

Query: 227 PKQAKTASHPPYFQMIKEALLALNEKGGSSPYAIAKYMEEKHKSVLPANFKKILGLQLKN 406
           PKQAKTASHPPYFQMIKEAL+ALNEKGGSSPYAIAKYMEEKHK+VLPANFKKILGLQLKN
Sbjct: 39  PKQAKTASHPPYFQMIKEALIALNEKGGSSPYAIAKYMEEKHKAVLPANFKKILGLQLKN 98

Query: 407 QAARGKLVKIKASYKLSEAAKEEKNDAASKKGKKDVPTARATRANADKQKQRPKRSRAVT 586
           QAARGKLVKIKASYKL+EAAK+E              TA+ T+A A+K++ RPKRS+  T
Sbjct: 99  QAARGKLVKIKASYKLTEAAKKEN-------------TAKVTKATAEKKESRPKRSKTAT 145

Query: 587 ATAP------XXXXXXXXXXXXXXXSTLSKHKQPKSI 679
           A AP                     ST +K KQPKSI
Sbjct: 146 AAAPKKTEAVKRAAKKVGPKKTKKVSTPAKPKQPKSI 182


>gb|AFK34182.1| unknown [Lotus japonicus]
          Length = 207

 Score =  173 bits (439), Expect = 6e-41
 Identities = 100/161 (62%), Positives = 111/161 (68%), Gaps = 6/161 (3%)
 Frame = +2

Query: 227 PKQAKTASHPPYFQMIKEALLALNEKGGSSPYAIAKYMEEKHKSVLPANFKKILGLQLKN 406
           PKQ K ASHPPYFQMI+EALLALNEKGGSSPYAIAKYMEEKHKSVLPANFKKILGLQLKN
Sbjct: 41  PKQGKIASHPPYFQMIEEALLALNEKGGSSPYAIAKYMEEKHKSVLPANFKKILGLQLKN 100

Query: 407 QAARGKLVKIKASYKLSEAAKEEKNDAASKKGKKDVPTARATRANADKQKQRPKRSRAVT 586
           QAA+GKLVKIKASYKLS A   +K+ A +K  K       A  A    +++R +   AVT
Sbjct: 101 QAAKGKLVKIKASYKLSGA---KKDGAGAKVAKAKTEKKDAAAAKVAPRQKRTRAVTAVT 157

Query: 587 ATAP------XXXXXXXXXXXXXXXSTLSKHKQPKSIKSPS 691
           A AP                     STL+K KQPKSI+SPS
Sbjct: 158 AAAPKSKKSEAVVKKGGMKKKTRKVSTLAKPKQPKSIRSPS 198


>ref|XP_003537627.1| PREDICTED: LOW QUALITY PROTEIN: histone H1-like [Glycine max]
          Length = 194

 Score =  168 bits (425), Expect = 3e-39
 Identities = 97/157 (61%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
 Frame = +2

Query: 227 PKQAKTASHPPYFQMIKEALLALNEKGGSSPYAIAKYMEEKHKSVLPANFKKILGLQLKN 406
           PKQAKTASHPPY QMIK+AL+ALNEKGGSSPYAIAKYMEEKHK+VLPANFKKILGLQLKN
Sbjct: 38  PKQAKTASHPPYLQMIKDALIALNEKGGSSPYAIAKYMEEKHKAVLPANFKKILGLQLKN 97

Query: 407 QAARGKLVKIKASYKLSEAAKEEKNDAASKKGKKDVPTARATRANADKQKQRPKRSRAVT 586
           QAARGKLVKIKASYKL+EAAK+ K             TA+AT+      + RPKR++  T
Sbjct: 98  QAARGKLVKIKASYKLAEAAKKVKES-----------TAKATK------ESRPKRNKIAT 140

Query: 587 ATAP------XXXXXXXXXXXXXXXSTLSKHKQPKSI 679
           A AP                     ST +K KQP+SI
Sbjct: 141 AVAPKKTEAVKKPAKKVGPKKTKKVSTPAKPKQPRSI 177


>dbj|BAC53940.1| stress-inducible H1 histone-like protein [Nicotiana tabacum]
          Length = 206

 Score =  166 bits (421), Expect = 7e-39
 Identities = 95/160 (59%), Positives = 109/160 (68%), Gaps = 5/160 (3%)
 Frame = +2

Query: 227 PKQAKTASHPPYFQMIKEALLALNEKGGSSPYAIAKYMEEKHKSVLPANFKKILGLQLKN 406
           PK AKT +HPPYFQMIKEALLALNEKGGSSPYAIAKYME+KHK  LPANF+KILGLQLKN
Sbjct: 46  PKSAKTVTHPPYFQMIKEALLALNEKGGSSPYAIAKYMEDKHKDELPANFRKILGLQLKN 105

Query: 407 QAARGKLVKIKASYKLSEAAKEEKNDAASKK-----GKKDVPTARATRANADKQKQRPKR 571
            AA+GKL+KIKASYKLS A K+E+  A++KK      KK   + R+T A A K +     
Sbjct: 106 SAAKGKLMKIKASYKLSVAGKKERTTASTKKVPKADTKKKPRSTRSTTATAKKTE----- 160

Query: 572 SRAVTATAPXXXXXXXXXXXXXXXSTLSKHKQPKSIKSPS 691
              VT  A                ST +K KQPKSIKSP+
Sbjct: 161 ---VTKKAKPTQKPKKVGAKKIRKSTPAKAKQPKSIKSPA 197


>gb|AAF64525.1|AF253416_1 histone H1 variant [Solanum chilense]
          Length = 202

 Score =  166 bits (419), Expect = 1e-38
 Identities = 94/161 (58%), Positives = 109/161 (67%), Gaps = 6/161 (3%)
 Frame = +2

Query: 227 PKQAKTASHPPYFQMIKEALLALNEKGGSSPYAIAKYMEEKHKSVLPANFKKILGLQLKN 406
           PK AK  +HPPYFQMIKEALLALNEKGGSSPYA+AKYME+KHK  LPANF+KILGLQLKN
Sbjct: 41  PKSAKAVTHPPYFQMIKEALLALNEKGGSSPYAVAKYMEDKHKDELPANFRKILGLQLKN 100

Query: 407 QAARGKLVKIKASYKLSEAAKEEKNDAASKK------GKKDVPTARATRANADKQKQRPK 568
            AA+GKL+KIKASYKLSEA K+E     S K       KK   + RAT A A K+ + PK
Sbjct: 101 SAAKGKLIKIKASYKLSEAGKKETTTKTSTKKLLKADSKKKTRSTRAT-ATAAKKTEVPK 159

Query: 569 RSRAVTATAPXXXXXXXXXXXXXXXSTLSKHKQPKSIKSPS 691
           +++A                     ST +K KQPKSIKSP+
Sbjct: 160 KAKAT-------PKPKKVGAKRTRKSTPAKAKQPKSIKSPA 193


Top