BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00001417
         (1307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526761.1| PREDICTED: 30S ribosomal protein 1, chloropl...   411   e-112
ref|NP_001241953.1| uncharacterized protein LOC100784915 [Glycin...   401   e-109
ref|XP_003602381.1| 30S ribosomal protein [Medicago truncatula] ...   390   e-106
gb|AFK39464.1| unknown [Medicago truncatula]                          389   e-106
ref|XP_002524427.1| Plastid-specific 30S ribosomal protein 1, ch...   352   1e-94

>ref|XP_003526761.1| PREDICTED: 30S ribosomal protein 1, chloroplastic-like [Glycine max]
          Length = 291

 Score =  411 bits (1056), Expect = e-112
 Identities = 218/276 (78%), Positives = 233/276 (84%)
 Frame = -2

Query: 1210 PHFYKNNTPSTTFFAPPQWLKLKYATSPTTTTKRRASLSVRMSWDGPLSSVKLIIQGKNM 1031
            PHF  +NT STTF      + LKYA   T+T+ R  SLS RMSWDGPLSSVKLIIQGKN+
Sbjct: 26   PHF--SNTLSTTFLG--HIVTLKYAA--TSTSNRGRSLSTRMSWDGPLSSVKLIIQGKNL 79

Query: 1030 ELTDAVKQHVEEKVGKAVQKHSHIVREVDVRLSTRGGGEFGRGPRTRRCEVTLFTKRHGV 851
            ELTDAVKQHVE+KVGKAVQKHSH+VREVDVRLS RGGGEFGRGPRTRRCEVTLFTKRHGV
Sbjct: 80   ELTDAVKQHVEDKVGKAVQKHSHLVREVDVRLSIRGGGEFGRGPRTRRCEVTLFTKRHGV 139

Query: 850  VRAEEDAESTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGFNRLKVREPVEQLPLPLDX 671
            VRAEEDAESTYGSIDLVSSIIQRKLRKIKEK +DHGRHMKGFNRLKVREPVEQLP+  D 
Sbjct: 140  VRAEEDAESTYGSIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNRLKVREPVEQLPMEED- 198

Query: 670  XXXXXXXXXXXXXXXXXXVRTKYFDMPPLTVSEAIYQLENVDHDFYGFRNEETGEINIVY 491
                              VRTKYFDMPPLTV+EAI QLENVDHDFYGFRNEETGEINIVY
Sbjct: 199  ---EILSPREEEESIDEVVRTKYFDMPPLTVAEAIEQLENVDHDFYGFRNEETGEINIVY 255

Query: 490  KRKEGGYGLIIPKGDGEADKLESVVVDPAREHTIKE 383
            KRKEGGYGLIIPKGDGEA+KLESVV++PA E ++KE
Sbjct: 256  KRKEGGYGLIIPKGDGEAEKLESVVLEPAIESSLKE 291


>ref|NP_001241953.1| uncharacterized protein LOC100784915 [Glycine max]
            gi|255634767|gb|ACU17745.1| unknown [Glycine max]
          Length = 291

 Score =  401 bits (1030), Expect = e-109
 Identities = 212/276 (76%), Positives = 228/276 (82%)
 Frame = -2

Query: 1210 PHFYKNNTPSTTFFAPPQWLKLKYATSPTTTTKRRASLSVRMSWDGPLSSVKLIIQGKNM 1031
            PHF+K  T STTF      + LKYA +  +   R  SLS  MSWDGPLSSVKL IQGKN+
Sbjct: 26   PHFFK--TLSTTFLG--HTVTLKYAATSASIPPR--SLSAHMSWDGPLSSVKLTIQGKNL 79

Query: 1030 ELTDAVKQHVEEKVGKAVQKHSHIVREVDVRLSTRGGGEFGRGPRTRRCEVTLFTKRHGV 851
            ELTDAVKQHVE+KVGKAVQKHSH+VREVDVRLS RGGGEFGRGPRTRRCEVTLFTKRHGV
Sbjct: 80   ELTDAVKQHVEDKVGKAVQKHSHLVREVDVRLSIRGGGEFGRGPRTRRCEVTLFTKRHGV 139

Query: 850  VRAEEDAESTYGSIDLVSSIIQRKLRKIKEKETDHGRHMKGFNRLKVREPVEQLPLPLDX 671
            VRAEEDAESTYGSIDLVSSIIQRKLRKIKEK +DHGRHMKGFNRLKVREPVEQLP+  D 
Sbjct: 140  VRAEEDAESTYGSIDLVSSIIQRKLRKIKEKVSDHGRHMKGFNRLKVREPVEQLPVEED- 198

Query: 670  XXXXXXXXXXXXXXXXXXVRTKYFDMPPLTVSEAIYQLENVDHDFYGFRNEETGEINIVY 491
                              VRTKYFDMPPLTV+EAI QLENVDHDFYGFRNEETGEINIVY
Sbjct: 199  ---EILSPQEEEESIDEVVRTKYFDMPPLTVAEAIEQLENVDHDFYGFRNEETGEINIVY 255

Query: 490  KRKEGGYGLIIPKGDGEADKLESVVVDPAREHTIKE 383
            KRKEGGYGLI+PKGDGEA+KLE VV++PA E ++KE
Sbjct: 256  KRKEGGYGLIVPKGDGEAEKLEPVVLEPAIESSLKE 291


>ref|XP_003602381.1| 30S ribosomal protein [Medicago truncatula]
            gi|355491429|gb|AES72632.1| 30S ribosomal protein
            [Medicago truncatula]
          Length = 313

 Score =  390 bits (1003), Expect = e-106
 Identities = 220/321 (68%), Positives = 240/321 (74%), Gaps = 13/321 (4%)
 Frame = -2

Query: 1306 MATSFHFHTTFMXXXXXXXXXXXXPTRCILA---PPHF--YKNNTPSTTFFA----PPQW 1154
            MAT F FHT+               TRC+     PP     K   PSTTF        Q+
Sbjct: 3    MATHFTFHTS-------SSYSSPSSTRCLSVLSLPPQLSSIKTKLPSTTFLTGEGGTSQF 55

Query: 1153 LKLKYATSPTTTTKRRAS---LSV-RMSWDGPLSSVKLIIQGKNMELTDAVKQHVEEKVG 986
            LKLKYA + TTTTKR  S   LSV RMSWDGPLSSVKLIIQGKNM+L DAVKQHVEEKVG
Sbjct: 56   LKLKYAAT-TTTTKRGGSGGSLSVVRMSWDGPLSSVKLIIQGKNMQLNDAVKQHVEEKVG 114

Query: 985  KAVQKHSHIVREVDVRLSTRGGGEFGRGPRTRRCEVTLFTKRHGVVRAEEDAESTYGSID 806
            +AVQKHS++VREVDVRLSTRGGGEFGRGPRTRRCEVTLFTKRHGVVRAEE AE+TY SID
Sbjct: 115  RAVQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLFTKRHGVVRAEEHAETTYASID 174

Query: 805  LVSSIIQRKLRKIKEKETDHGRHMKGFNRLKVREPVEQLPLPLDXXXXXXXXXXXXXXXX 626
            LVSS+IQRKLRKIKEKETDHGRHMKG NRLK RE V  LPLP +                
Sbjct: 175  LVSSVIQRKLRKIKEKETDHGRHMKGSNRLKFREAV--LPLPTEDETEISPQKEEEEELI 232

Query: 625  XXXVRTKYFDMPPLTVSEAIYQLENVDHDFYGFRNEETGEINIVYKRKEGGYGLIIPKGD 446
               VRTKYFDMPPLTV EAI QLE V HDFY FRNEE+GE+NIVYKRKEGGYGLIIPKG+
Sbjct: 233  EEVVRTKYFDMPPLTVFEAIDQLEMVAHDFYAFRNEESGEVNIVYKRKEGGYGLIIPKGN 292

Query: 445  GEADKLESVVVDPAREHTIKE 383
            GEADKLE +VV+PA+E +++E
Sbjct: 293  GEADKLEPIVVEPAKEPSLQE 313


>gb|AFK39464.1| unknown [Medicago truncatula]
          Length = 353

 Score =  389 bits (999), Expect = e-106
 Identities = 219/321 (68%), Positives = 239/321 (74%), Gaps = 13/321 (4%)
 Frame = -2

Query: 1306 MATSFHFHTTFMXXXXXXXXXXXXPTRCILA---PPHF--YKNNTPSTTFFA----PPQW 1154
            MAT F FHT+               TRC+     PP     K   PSTTF        Q+
Sbjct: 43   MATHFTFHTS-------SSYSSPSSTRCLSVLSLPPQLSSIKTKLPSTTFLTGEGGTSQF 95

Query: 1153 LKLKYATSPTTTTKRRAS---LSV-RMSWDGPLSSVKLIIQGKNMELTDAVKQHVEEKVG 986
            LKLKYA + TTTTKR  S   LSV RMSWDGPLSSVKLIIQGKNM+L DAVKQHVEEKVG
Sbjct: 96   LKLKYAAT-TTTTKRGGSGGSLSVVRMSWDGPLSSVKLIIQGKNMQLNDAVKQHVEEKVG 154

Query: 985  KAVQKHSHIVREVDVRLSTRGGGEFGRGPRTRRCEVTLFTKRHGVVRAEEDAESTYGSID 806
            +AVQKHS++VRE DVRLSTRGGGEFGRGPRTRRCEVTLFTKRHGVVRAEE AE+TY SID
Sbjct: 155  RAVQKHSYLVREADVRLSTRGGGEFGRGPRTRRCEVTLFTKRHGVVRAEEHAETTYASID 214

Query: 805  LVSSIIQRKLRKIKEKETDHGRHMKGFNRLKVREPVEQLPLPLDXXXXXXXXXXXXXXXX 626
            LVSS+IQRKLRKIKEKETDHGRHMKG NRLK RE V  LPLP +                
Sbjct: 215  LVSSVIQRKLRKIKEKETDHGRHMKGSNRLKFREAV--LPLPTEDETEISPQKEEEEELI 272

Query: 625  XXXVRTKYFDMPPLTVSEAIYQLENVDHDFYGFRNEETGEINIVYKRKEGGYGLIIPKGD 446
               VRTKYFDMPPLTV EAI QLE V HDFY FRNEE+GE+NIVYKRKEGGYGLIIPKG+
Sbjct: 273  EEVVRTKYFDMPPLTVFEAIDQLEMVAHDFYAFRNEESGEVNIVYKRKEGGYGLIIPKGN 332

Query: 445  GEADKLESVVVDPAREHTIKE 383
            GEADKLE +VV+PA+E +++E
Sbjct: 333  GEADKLEPIVVEPAKEPSLQE 353


>ref|XP_002524427.1| Plastid-specific 30S ribosomal protein 1, chloroplast precursor,
            putative [Ricinus communis] gi|223536311|gb|EEF37962.1|
            Plastid-specific 30S ribosomal protein 1, chloroplast
            precursor, putative [Ricinus communis]
          Length = 311

 Score =  352 bits (903), Expect = 1e-94
 Identities = 180/244 (73%), Positives = 203/244 (83%)
 Frame = -2

Query: 1114 KRRASLSVRMSWDGPLSSVKLIIQGKNMELTDAVKQHVEEKVGKAVQKHSHIVREVDVRL 935
            KR    +VRMSW+GPLSSVKLI QGKN+ELTD VK+HVE+KVGKAVQKHSH+VREVDVRL
Sbjct: 70   KRGRRSAVRMSWEGPLSSVKLITQGKNLELTDTVKKHVEDKVGKAVQKHSHLVREVDVRL 129

Query: 934  STRGGGEFGRGPRTRRCEVTLFTKRHGVVRAEEDAESTYGSIDLVSSIIQRKLRKIKEKE 755
            S RGG EFG+GP+ RRCEVTLFTK+HGV+RAEEDAE+ Y SIDLVSSIIQRKLRKIKEK 
Sbjct: 130  SVRGG-EFGKGPKIRRCEVTLFTKKHGVIRAEEDAETIYASIDLVSSIIQRKLRKIKEKV 188

Query: 754  TDHGRHMKGFNRLKVREPVEQLPLPLDXXXXXXXXXXXXXXXXXXXVRTKYFDMPPLTVS 575
            +DHGRHMKGFNRLKVREPV + P+  D                   VRTKYFDMPPLTVS
Sbjct: 189  SDHGRHMKGFNRLKVREPVAE-PVKDDTDEVDGVLGDEDEDYIDEVVRTKYFDMPPLTVS 247

Query: 574  EAIYQLENVDHDFYGFRNEETGEINIVYKRKEGGYGLIIPKGDGEADKLESVVVDPAREH 395
            EAI QL+NVDHDFYGFRNEETGEINI+YKRK GGYG+IIPK +G+A+KLE VV++PARE 
Sbjct: 248  EAIEQLKNVDHDFYGFRNEETGEINIIYKRKAGGYGIIIPKENGKAEKLEPVVIEPAREP 307

Query: 394  TIKE 383
            +I E
Sbjct: 308  SIAE 311