BLASTX nr result

ID: Glycyrrhiza24_contig00001407 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00001407
         (1793 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549298.1| PREDICTED: poly(rC)-binding protein 3-like [...   568   e-159
ref|XP_003542958.1| PREDICTED: poly(rC)-binding protein 3-like [...   563   e-158
ref|XP_003610050.1| Poly(rC)-binding protein [Medicago truncatul...   554   e-155
ref|XP_003546434.1| PREDICTED: KH domain-containing protein At4g...   551   e-154
ref|XP_003533739.1| PREDICTED: KH domain-containing protein At4g...   545   e-152

>ref|XP_003549298.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
          Length = 436

 Score =  568 bits (1464), Expect = e-159
 Identities = 302/398 (75%), Positives = 328/398 (82%), Gaps = 3/398 (0%)
 Frame = +3

Query: 153  MATAEAIQNGTPSQ-PLAETTYDDANPSTDEPESAEKRWPGWPGHCVFRLIVPVLKVGGI 329
            MAT + IQNG  S  P AE +   A   T +P +AEKRWPGWPGHCVFRLIVPVLKVG I
Sbjct: 1    MATLDPIQNGVSSDNPAAEPSSTPAEDPTPDPAAAEKRWPGWPGHCVFRLIVPVLKVGSI 60

Query: 330  IGRKGELIKKTCEETRARIRVLDAPLGTPDRIVLVSGKEDPEAPLSPAMDAVIRVFKRVS 509
            IGRKGELIKKTCEET+ARIRVLD  +GT DRIVL+SGKE+PEAPLSPAM+AVIRVFKRVS
Sbjct: 61   IGRKGELIKKTCEETKARIRVLDGAVGTSDRIVLISGKEEPEAPLSPAMNAVIRVFKRVS 120

Query: 510  GLSETDGSNVAAGATFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDELPF 689
            G SE D  N A+   FCS+RLLVASTQAINLIGKQGSLIKSIQE+TGASVRVLSGDE+PF
Sbjct: 121  GFSEIDAENKASAVAFCSVRLLVASTQAINLIGKQGSLIKSIQENTGASVRVLSGDEVPF 180

Query: 690  YAASDERIVELQGETLKVLKALEAVVGHLRKFLVDHSVLPLFEKTCNTTISQDRQAD-SW 866
            YAA+DERIVELQGE +KVLKALEAVVGHLRKFLVD+SVLPLFEKT N TISQ+ QAD +W
Sbjct: 181  YAAADERIVELQGEAMKVLKALEAVVGHLRKFLVDNSVLPLFEKTYNATISQEHQADTTW 240

Query: 867  ADKQSLHSASQPSIVSDIPFSTKRDSLFADREXXXXXXXXXXXXXXYGQD-XXXXXXXXX 1043
             DK SLHSASQPSIV+D+P STKRDSLFADRE              YGQD          
Sbjct: 241  VDKPSLHSASQPSIVTDLPLSTKRDSLFADRESQLDSLLPPSTMSIYGQDSSLSGLRSSA 300

Query: 1044 XXXXXXXPIVTTVIQTMQIPMSYAEDIIGIQGTNIDYIRRSSGAILTVQESKVPDEIIVE 1223
                   PIVTTVIQTMQIP+SYAEDIIGIQGTNI+YIR +SGAILTVQES VPDEIIVE
Sbjct: 301  LSRPSAPPIVTTVIQTMQIPLSYAEDIIGIQGTNIEYIRCTSGAILTVQESPVPDEIIVE 360

Query: 1224 IKGTSSEVQTAQQLIQEVISNHKEPVASSYGRLDTGLR 1337
            IKGTSS+VQTAQQLIQEVISNHKEP+AS+Y RLDTGLR
Sbjct: 361  IKGTSSQVQTAQQLIQEVISNHKEPLASNYSRLDTGLR 398


>ref|XP_003542958.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
          Length = 436

 Score =  563 bits (1452), Expect = e-158
 Identities = 302/398 (75%), Positives = 324/398 (81%), Gaps = 3/398 (0%)
 Frame = +3

Query: 153  MATAEAIQNGTPSQPLAETTYDDANPSTDEPESA-EKRWPGWPGHCVFRLIVPVLKVGGI 329
            MAT + IQNG  S   A             P++A EKRWPGWPGHCVFRLIVPVLKVG I
Sbjct: 1    MATLDQIQNGVSSDNPAAAEPPSTTADVPPPDAAAEKRWPGWPGHCVFRLIVPVLKVGSI 60

Query: 330  IGRKGELIKKTCEETRARIRVLDAPLGTPDRIVLVSGKEDPEAPLSPAMDAVIRVFKRVS 509
            IGRKGELIKKTCEET+ARIRVLD  +GT DRIVL+SGKED EAPLSPAMDAVIRVFKRVS
Sbjct: 61   IGRKGELIKKTCEETKARIRVLDGAVGTSDRIVLISGKEDLEAPLSPAMDAVIRVFKRVS 120

Query: 510  GLSETDGSNVAAGATFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDELPF 689
            G SE D  N A+   FCS+RLLVASTQAINLIGKQGSLIKSIQE+TGASVRVLSGDE+PF
Sbjct: 121  GFSEIDAKNKASAVAFCSVRLLVASTQAINLIGKQGSLIKSIQENTGASVRVLSGDEVPF 180

Query: 690  YAASDERIVELQGETLKVLKALEAVVGHLRKFLVDHSVLPLFEKTCNTTISQDRQAD-SW 866
            YAA+DERIVELQGE +KVLKALEAVVGHLRKFLVD+SVLPLFEKT N TISQ+RQAD +W
Sbjct: 181  YAAADERIVELQGEAMKVLKALEAVVGHLRKFLVDNSVLPLFEKTYNATISQERQADTTW 240

Query: 867  ADKQSLHSASQPSIVSDIPFSTKRDSLFADREXXXXXXXXXXXXXXYGQD-XXXXXXXXX 1043
             DK SLHSASQPSIV+DIP STKRDSLFADRE              YGQD          
Sbjct: 241  VDKPSLHSASQPSIVTDIPLSTKRDSLFADRESQLDSLLPPSTMSMYGQDSSLSGLRSSA 300

Query: 1044 XXXXXXXPIVTTVIQTMQIPMSYAEDIIGIQGTNIDYIRRSSGAILTVQESKVPDEIIVE 1223
                   PIVTTVIQTMQIP+SYAEDIIGIQGTNI+YIRR+SGAILTVQES+VPDEIIVE
Sbjct: 301  LSRPSAPPIVTTVIQTMQIPLSYAEDIIGIQGTNIEYIRRTSGAILTVQESRVPDEIIVE 360

Query: 1224 IKGTSSEVQTAQQLIQEVISNHKEPVASSYGRLDTGLR 1337
            IKGTSS+VQTAQQLIQEVISNH EPVAS+Y RLDTGLR
Sbjct: 361  IKGTSSQVQTAQQLIQEVISNHTEPVASNYSRLDTGLR 398


>ref|XP_003610050.1| Poly(rC)-binding protein [Medicago truncatula]
            gi|355511105|gb|AES92247.1| Poly(rC)-binding protein
            [Medicago truncatula]
          Length = 431

 Score =  554 bits (1428), Expect = e-155
 Identities = 301/398 (75%), Positives = 328/398 (82%), Gaps = 3/398 (0%)
 Frame = +3

Query: 153  MATA-EAIQNGTPSQPLAETTYDDANPSTDEPESAEKRWPGWPGHCVFRLIVPVLKVGGI 329
            MATA E I NGT  Q  + T +D A   TDE ES EKRWPGWPGHCVFRLIVPV+KVG I
Sbjct: 1    MATAVEPIPNGT-LQSESYTIFDAAANPTDESES-EKRWPGWPGHCVFRLIVPVVKVGII 58

Query: 330  IGRKGELIKKTCEETRARIRVLDAPLGTPDRIVLVSGKEDPEAPLSPAMDAVIRVFKRVS 509
            IGRKGELIKKTCEET ARIRVLDAP+GTPDRIVL+SGKED EAPLSPAMDA++R+FKRVS
Sbjct: 59   IGRKGELIKKTCEETHARIRVLDAPVGTPDRIVLISGKEDLEAPLSPAMDAILRIFKRVS 118

Query: 510  GLSETDGSNVAA-GATFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDELP 686
            GLSETD +N AA G   CSIRLLVASTQAINLIGKQGS IK+IQE+TGA +RVLSGDELP
Sbjct: 119  GLSETDNNNTAAAGVALCSIRLLVASTQAINLIGKQGSSIKAIQENTGAVIRVLSGDELP 178

Query: 687  FYAASDERIVELQGETLKVLKALEAVVGHLRKFLVDHSVLPLFEKTCNTTISQDRQADSW 866
             YA +DERI++LQGETLKVLKALEAVVGHLRKFLVD SV+PLFEKTCN TISQDRQ D+W
Sbjct: 179  SYAGADERIIDLQGETLKVLKALEAVVGHLRKFLVDSSVIPLFEKTCNATISQDRQTDAW 238

Query: 867  ADKQSLHSASQPSIVSDIPFSTKRDSLFADREXXXXXXXXXXXXXXYGQD-XXXXXXXXX 1043
            ADK SL+SASQPSIV+DIP  TKRDS FADRE              YGQD          
Sbjct: 239  ADKPSLYSASQPSIVADIP--TKRDSFFADRESQLDSLLSSSTMSLYGQDSSSISGLRSS 296

Query: 1044 XXXXXXXPIVTTVIQTMQIPMSYAEDIIGIQGTNIDYIRRSSGAILTVQESKVPDEIIVE 1223
                    IVTTVIQTMQIP+SYAEDIIGIQGTNIDYIRR+SGAILTVQES+VPDEIIVE
Sbjct: 297  AFNRASASIVTTVIQTMQIPLSYAEDIIGIQGTNIDYIRRTSGAILTVQESRVPDEIIVE 356

Query: 1224 IKGTSSEVQTAQQLIQEVISNHKEPVASSYGRLDTGLR 1337
            IKGTS++VQTAQQLIQEVI+NH E +AS+Y RLDTGLR
Sbjct: 357  IKGTSTQVQTAQQLIQEVITNHNETIASNYARLDTGLR 394


>ref|XP_003546434.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine max]
          Length = 442

 Score =  551 bits (1419), Expect = e-154
 Identities = 294/405 (72%), Positives = 323/405 (79%), Gaps = 10/405 (2%)
 Frame = +3

Query: 153  MATAEAIQNGTPSQPLAETTYDDANPSTDEPESA--------EKRWPGWPGHCVFRLIVP 308
            MATAE +QNGT ++PL       A P T+   +A        EKRWPGWPG CVFRLIVP
Sbjct: 1    MATAEPLQNGT-AEPLLPDNVSAAQPPTETESNAAAAASTPPEKRWPGWPGDCVFRLIVP 59

Query: 309  VLKVGGIIGRKGELIKKTCEETRARIRVLDAPLGTPDRIVLVSGKEDPEAPLSPAMDAVI 488
            V KVG IIGRKGELIKK CEETR+RIRVLDAPLGTPDRIVLVSGKE+PEA LSPAMDAV+
Sbjct: 60   VGKVGSIIGRKGELIKKMCEETRSRIRVLDAPLGTPDRIVLVSGKEEPEAALSPAMDAVV 119

Query: 489  RVFKRVSGLSETDGSNV--AAGATFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVR 662
            R+FKRVSGLSETD  N   AAG  FCSIRLLVASTQAINLIGKQGSLIKSIQE+T ASVR
Sbjct: 120  RIFKRVSGLSETDAENKESAAGLAFCSIRLLVASTQAINLIGKQGSLIKSIQENTSASVR 179

Query: 663  VLSGDELPFYAASDERIVELQGETLKVLKALEAVVGHLRKFLVDHSVLPLFEKTCNTTIS 842
            VLSGDE+  YA  DERIVE+QGE LKVLKALEAVVGHLRKFLVDHSVLPLFEKT N + S
Sbjct: 180  VLSGDEVQSYATVDERIVEIQGEALKVLKALEAVVGHLRKFLVDHSVLPLFEKTYNASTS 239

Query: 843  QDRQADSWADKQSLHSASQPSIVSDIPFSTKRDSLFADREXXXXXXXXXXXXXXYGQDXX 1022
            QDRQA++W+DK  LH+ S+ SI +DIP+STKRDS+ ADRE              YGQD  
Sbjct: 240  QDRQAETWSDKSLLHTTSRTSIFADIPYSTKRDSVLADRESQLDSFLPSSTMSLYGQDSS 299

Query: 1023 XXXXXXXXXXXXXXPIVTTVIQTMQIPMSYAEDIIGIQGTNIDYIRRSSGAILTVQESKV 1202
                          PIVTTVIQTMQIP+SYAEDIIGIQGTNI+YIRR+SGAILTVQES+V
Sbjct: 300  LSGVRSSALGRVGAPIVTTVIQTMQIPLSYAEDIIGIQGTNIEYIRRTSGAILTVQESRV 359

Query: 1203 PDEIIVEIKGTSSEVQTAQQLIQEVISNHKEPVASSYGRLDTGLR 1337
            PDEI+VEIKGTSSEVQTAQQLIQ+VIS+HKEP+ SSYGRLD G R
Sbjct: 360  PDEIVVEIKGTSSEVQTAQQLIQDVISSHKEPITSSYGRLDAGPR 404


>ref|XP_003533739.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine max]
          Length = 443

 Score =  545 bits (1403), Expect = e-152
 Identities = 291/401 (72%), Positives = 317/401 (79%), Gaps = 10/401 (2%)
 Frame = +3

Query: 153  MATAEAIQNGTPSQPLAETTYDDANPSTDEPESA--------EKRWPGWPGHCVFRLIVP 308
            MATAE +QNG+   PL       A P T+    A        EKRWPGWPG CVFRLIVP
Sbjct: 1    MATAEPLQNGSAENPLPVDNAPAAQPPTETEADAAATASTPPEKRWPGWPGDCVFRLIVP 60

Query: 309  VLKVGGIIGRKGELIKKTCEETRARIRVLDAPLGTPDRIVLVSGKEDPEAPLSPAMDAVI 488
            V KVG IIGRKGELIKK CEETR+RIRVLDAPLGTPDRIVLVSGKEDPEA LSPAMDAV+
Sbjct: 61   VGKVGSIIGRKGELIKKMCEETRSRIRVLDAPLGTPDRIVLVSGKEDPEAALSPAMDAVV 120

Query: 489  RVFKRVSGLSETDGSNV--AAGATFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVR 662
            R+FKRVSG SETD  N   AAG  F SIRLLVASTQAINLIGKQGSLIKSIQE+T ASVR
Sbjct: 121  RIFKRVSGFSETDAENQESAAGLAFSSIRLLVASTQAINLIGKQGSLIKSIQENTSASVR 180

Query: 663  VLSGDELPFYAASDERIVELQGETLKVLKALEAVVGHLRKFLVDHSVLPLFEKTCNTTIS 842
            VLSGDE+ FYA ++ERIVE+QGE LKVLKALEAVVGHLRKFLVDHSVLPLFEKT N   S
Sbjct: 181  VLSGDEVQFYATANERIVEIQGEALKVLKALEAVVGHLRKFLVDHSVLPLFEKTYNAPTS 240

Query: 843  QDRQADSWADKQSLHSASQPSIVSDIPFSTKRDSLFADREXXXXXXXXXXXXXXYGQDXX 1022
            QDRQA++W+DK  LH++S+ SI +DIP STKRDS+ ADRE              YGQD  
Sbjct: 241  QDRQAETWSDKSLLHTSSRTSIFADIPLSTKRDSVLADRESQLDLFLPSSTMSLYGQDSS 300

Query: 1023 XXXXXXXXXXXXXXPIVTTVIQTMQIPMSYAEDIIGIQGTNIDYIRRSSGAILTVQESKV 1202
                          PIVTTVIQTMQIP+SYAEDIIGIQGTNI+YIRR+SGAILTVQES+V
Sbjct: 301  LSGVHSSALGRVGAPIVTTVIQTMQIPLSYAEDIIGIQGTNIEYIRRTSGAILTVQESRV 360

Query: 1203 PDEIIVEIKGTSSEVQTAQQLIQEVISNHKEPVASSYGRLD 1325
            PDEI+VEIKGTSSEVQTAQQLIQ+VIS+HKEPV SSYGRLD
Sbjct: 361  PDEIVVEIKGTSSEVQTAQQLIQDVISSHKEPVTSSYGRLD 401


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