BLASTX nr result

ID: Glycyrrhiza24_contig00001405 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00001405
         (1091 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001235745.1| uncharacterized protein LOC100305975 [Glycin...   287   4e-75
ref|XP_003544434.1| PREDICTED: 30S ribosomal protein S9, chlorop...   282   9e-74
ref|XP_002283650.1| PREDICTED: 30S ribosomal protein S9, chlorop...   280   3e-73
ref|XP_002302464.1| predicted protein [Populus trichocarpa] gi|2...   268   2e-69
ref|XP_002326903.1| predicted protein [Populus trichocarpa] gi|1...   267   4e-69

>ref|NP_001235745.1| uncharacterized protein LOC100305975 [Glycine max]
           gi|255627157|gb|ACU13923.1| unknown [Glycine max]
          Length = 207

 Score =  287 bits (734), Expect = 4e-75
 Identities = 152/190 (80%), Positives = 163/190 (85%), Gaps = 2/190 (1%)
 Frame = +3

Query: 162 QKPNTLSFARTNTLSLL--RVPKNPSLXXXXXXXXXXXXXXELEREEIKKHVKSRLPGGF 335
           Q+PNTLSFART +LS+   R PK PS               E E E++K +VKSRLPGGF
Sbjct: 23  QRPNTLSFARTESLSVSVSRFPKTPS-----SLVVSATALAEPETEDLKNYVKSRLPGGF 77

Query: 336 AAQTIIGTGRRKSAIARVVLQEGTGKIIINYREAKEYLQGNPLWLQYIKVPLVTLGYETS 515
           AAQTIIGTGRRKSAIARVVLQEGTGK IINYR+AKEYLQGNPLWLQYIKVPL+TLGYE++
Sbjct: 78  AAQTIIGTGRRKSAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLITLGYESN 137

Query: 516 YDVFVKAEGGGLSGQAQAISLGIARALLKVSEDHRVPLRQEGLLTRDSRVVERKKAGLHK 695
           YDVFVKAEGGGLSGQAQAISLGIARALLKVSEDHRVPLRQEGLLTRDSRVVERKK GL K
Sbjct: 138 YDVFVKAEGGGLSGQAQAISLGIARALLKVSEDHRVPLRQEGLLTRDSRVVERKKVGLKK 197

Query: 696 ARKAPQFSKR 725
           ARKAPQ+SKR
Sbjct: 198 ARKAPQYSKR 207


>ref|XP_003544434.1| PREDICTED: 30S ribosomal protein S9, chloroplastic-like [Glycine
           max]
          Length = 207

 Score =  282 bits (722), Expect = 9e-74
 Identities = 151/190 (79%), Positives = 161/190 (84%), Gaps = 2/190 (1%)
 Frame = +3

Query: 162 QKPNTLSFARTNTLSLL--RVPKNPSLXXXXXXXXXXXXXXELEREEIKKHVKSRLPGGF 335
           Q+P TLSFART +LSL     PK PS               E E E++KK+VKSRLPGGF
Sbjct: 23  QRPCTLSFARTESLSLSVSPFPKTPS-----SLVVTATALAEPETEDLKKYVKSRLPGGF 77

Query: 336 AAQTIIGTGRRKSAIARVVLQEGTGKIIINYREAKEYLQGNPLWLQYIKVPLVTLGYETS 515
           AAQTIIGTGRRKSAIARVVLQEGTGK IINYR+AKEYLQGNPLWLQYIKVPL+TLGYE++
Sbjct: 78  AAQTIIGTGRRKSAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLITLGYESN 137

Query: 516 YDVFVKAEGGGLSGQAQAISLGIARALLKVSEDHRVPLRQEGLLTRDSRVVERKKAGLHK 695
           YDVFVKAEGGGLSGQAQAISLGIARALLKVSEDHR PLRQEGLLTRDSRVVERKK GL K
Sbjct: 138 YDVFVKAEGGGLSGQAQAISLGIARALLKVSEDHRAPLRQEGLLTRDSRVVERKKVGLKK 197

Query: 696 ARKAPQFSKR 725
           ARKAPQ+SKR
Sbjct: 198 ARKAPQYSKR 207


>ref|XP_002283650.1| PREDICTED: 30S ribosomal protein S9, chloroplastic [Vitis vinifera]
           gi|147855629|emb|CAN79164.1| hypothetical protein
           VITISV_019246 [Vitis vinifera]
           gi|302142422|emb|CBI19625.3| unnamed protein product
           [Vitis vinifera]
          Length = 209

 Score =  280 bits (717), Expect = 3e-73
 Identities = 146/188 (77%), Positives = 161/188 (85%)
 Frame = +3

Query: 162 QKPNTLSFARTNTLSLLRVPKNPSLXXXXXXXXXXXXXXELEREEIKKHVKSRLPGGFAA 341
           Q+P++LSF R+N+LS+  + K  SL              ELE  ++KK+VKSRLPGGFAA
Sbjct: 23  QRPSSLSFVRSNSLSISHLTKTSSLAVVASAAAVASPL-ELETADLKKYVKSRLPGGFAA 81

Query: 342 QTIIGTGRRKSAIARVVLQEGTGKIIINYREAKEYLQGNPLWLQYIKVPLVTLGYETSYD 521
           QTIIGTGRRK AIARVVLQEGTGK+IINYR+AKEYLQGNPLWLQY+KVPLVTLGYE+SYD
Sbjct: 82  QTIIGTGRRKCAIARVVLQEGTGKVIINYRDAKEYLQGNPLWLQYVKVPLVTLGYESSYD 141

Query: 522 VFVKAEGGGLSGQAQAISLGIARALLKVSEDHRVPLRQEGLLTRDSRVVERKKAGLHKAR 701
           VFVKA GGGLSGQAQAISLGIARALLKVSEDHR PLR+EGLLTRDSRVVERKK GL KAR
Sbjct: 142 VFVKAHGGGLSGQAQAISLGIARALLKVSEDHRGPLRKEGLLTRDSRVVERKKVGLKKAR 201

Query: 702 KAPQFSKR 725
           KAPQFSKR
Sbjct: 202 KAPQFSKR 209


>ref|XP_002302464.1| predicted protein [Populus trichocarpa] gi|222844190|gb|EEE81737.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score =  268 bits (684), Expect = 2e-69
 Identities = 139/189 (73%), Positives = 156/189 (82%), Gaps = 1/189 (0%)
 Frame = +3

Query: 162 QKPNTLSFARTNTLSLLRVP-KNPSLXXXXXXXXXXXXXXELEREEIKKHVKSRLPGGFA 338
           QKPNTLSF+R+ +LSL   P  N +               E    ++KK VKSRLPGGFA
Sbjct: 23  QKPNTLSFSRSKSLSLSLSPYSNSNKQPFTLRVTATVASPETTTTDLKKLVKSRLPGGFA 82

Query: 339 AQTIIGTGRRKSAIARVVLQEGTGKIIINYREAKEYLQGNPLWLQYIKVPLVTLGYETSY 518
           AQ I GTGRRK AIARVVLQEGTGK+IINYR+AKEYLQGNPLWLQY+KVPLVTLGYE+SY
Sbjct: 83  AQPIHGTGRRKCAIARVVLQEGTGKVIINYRDAKEYLQGNPLWLQYVKVPLVTLGYESSY 142

Query: 519 DVFVKAEGGGLSGQAQAISLGIARALLKVSEDHRVPLRQEGLLTRDSRVVERKKAGLHKA 698
           DVFVKA GGGLSGQAQAISLG+ARALLKVS++HR+PL++EGLLTRDSR+VERKK GL KA
Sbjct: 143 DVFVKAHGGGLSGQAQAISLGVARALLKVSQNHRIPLKREGLLTRDSRIVERKKVGLKKA 202

Query: 699 RKAPQFSKR 725
           RKAPQFSKR
Sbjct: 203 RKAPQFSKR 211


>ref|XP_002326903.1| predicted protein [Populus trichocarpa] gi|118483304|gb|ABK93554.1|
           unknown [Populus trichocarpa]
           gi|222835218|gb|EEE73653.1| predicted protein [Populus
           trichocarpa]
          Length = 210

 Score =  267 bits (682), Expect = 4e-69
 Identities = 137/188 (72%), Positives = 154/188 (81%)
 Frame = +3

Query: 162 QKPNTLSFARTNTLSLLRVPKNPSLXXXXXXXXXXXXXXELEREEIKKHVKSRLPGGFAA 341
           QKPNTLSF+R+N+LS      +                      ++KK VKSRLPGGFAA
Sbjct: 23  QKPNTLSFSRSNSLSFPLSHPSKQPLTLRVSATVASPETTTTTTDLKKLVKSRLPGGFAA 82

Query: 342 QTIIGTGRRKSAIARVVLQEGTGKIIINYREAKEYLQGNPLWLQYIKVPLVTLGYETSYD 521
           QTI GTGRRK AIARVVLQEGTGK+IINYR+AKEYLQGNPLWLQY+KVPLVTLGYE+SYD
Sbjct: 83  QTIHGTGRRKCAIARVVLQEGTGKVIINYRDAKEYLQGNPLWLQYVKVPLVTLGYESSYD 142

Query: 522 VFVKAEGGGLSGQAQAISLGIARALLKVSEDHRVPLRQEGLLTRDSRVVERKKAGLHKAR 701
           VFVKA GGGL+GQAQAISLG+ARALLKVS+DHR+PL++EGLLTRDSR+VERKK GL KAR
Sbjct: 143 VFVKAHGGGLAGQAQAISLGVARALLKVSQDHRIPLKREGLLTRDSRIVERKKVGLKKAR 202

Query: 702 KAPQFSKR 725
           KAPQFSKR
Sbjct: 203 KAPQFSKR 210


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