BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00001337
         (789 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516886.1| PREDICTED: pentatricopeptide repeat-containi...   338   6e-91
ref|XP_003516901.1| PREDICTED: pentatricopeptide repeat-containi...   337   1e-90
ref|XP_003533450.1| PREDICTED: pentatricopeptide repeat-containi...   336   3e-90
ref|XP_003612704.1| Pentatricopeptide repeat-containing protein ...   291   8e-77
ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containi...   271   9e-71

>ref|XP_003516886.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31920-like [Glycine max]
          Length = 605

 Score =  338 bits (868), Expect = 6e-91
 Identities = 168/221 (76%), Positives = 186/221 (84%)
 Frame = -1

Query: 663 MTGTFVLSQTHXXXXXXXXXXXXXXSTSFNEKGWLSLLKRCKSMEEFKQVHAKVIKLGLF 484
           M+GT VL Q+H              +  FNE+GWLSLLKRCKSMEEFKQVHA ++KLGLF
Sbjct: 1   MSGTSVLCQSHLLSLPNSPPQSSELNAKFNEQGWLSLLKRCKSMEEFKQVHAHILKLGLF 60

Query: 483 WEDSFCGSNLVATCALTKWGSMEYACSIFRQIEDPGGFEYNTMIRGNVNDMNLEEALLLY 304
           + DSFCGSNLVA+CAL++WGSMEYACSIF QIE+PG FEYNTMIRGNVN M+LEEALLLY
Sbjct: 61  Y-DSFCGSNLVASCALSRWGSMEYACSIFSQIEEPGSFEYNTMIRGNVNSMDLEEALLLY 119

Query: 303 VEMLERGIEPDNFTYPFVFKACSLLGALKEGMQIHGHVFKLGLEGGDIFVQNSLISMYGK 124
           VEMLERGIEPDNFTYPFV KACSLL ALKEG+QIH HVFK GLE  D+FVQN LISMYGK
Sbjct: 120 VEMLERGIEPDNFTYPFVLKACSLLVALKEGVQIHAHVFKAGLE-VDVFVQNGLISMYGK 178

Query: 123 CGAIKHACAVFEKMGEKSVASWSAIIGAHACEEIWHECLML 1
           CGAI+HA  VFE+M EKSVASWS+IIGAHA  E+WHECLML
Sbjct: 179 CGAIEHAGVVFEQMDEKSVASWSSIIGAHASVEMWHECLML 219



 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 50/178 (28%), Positives = 90/178 (50%), Gaps = 4/178 (2%)
 Frame = -1

Query: 555 LLKRCK---SMEEFKQVHAKVIKLGLFWEDSFCGSNLVATCALTKWGSMEYACSIFRQIE 385
           +LK C    +++E  Q+HA V K GL   D F  + L++     K G++E+A  +F Q++
Sbjct: 137 VLKACSLLVALKEGVQIHAHVFKAGLE-VDVFVQNGLISMYG--KCGAIEHAGVVFEQMD 193

Query: 384 DPGGFEYNTMIRGNVNDMNLEEALLLYVEMLERGIE-PDNFTYPFVFKACSLLGALKEGM 208
           +     ++++I  + +     E L+L  +M   G    +         AC+ LG+   G 
Sbjct: 194 EKSVASWSSIIGAHASVEMWHECLMLLGDMSGEGRHRAEESILVSALSACTHLGSPNLGR 253

Query: 207 QIHGHVFKLGLEGGDIFVQNSLISMYGKCGAIKHACAVFEKMGEKSVASWSAIIGAHA 34
            IHG + +  +   ++ V+ SLI MY KCG+++    VF+ M  K+  S++ +I   A
Sbjct: 254 CIHGILLR-NISELNVVVKTSLIDMYVKCGSLEKGLCVFQNMAHKNRYSYTVMIAGLA 310



 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 35/132 (26%), Positives = 61/132 (46%), Gaps = 1/132 (0%)
 Frame = -1

Query: 432 KWGSMEYACSIFRQIEDPGGFEYNTMIRGNVNDMNLEEALLLYVEMLERGIEPDNFTYPF 253
           K GS+E    +F+ +     + Y  MI G        EA+ ++ +MLE G+ PD+  Y  
Sbjct: 280 KCGSLEKGLCVFQNMAHKNRYSYTVMIAGLAIHGRGREAVRVFSDMLEEGLTPDDVVYVG 339

Query: 252 VFKACSLLGALKEGMQIHGHVFKLGLEGGDIFVQNSLISMYGKCGAIKHACAVFEKMGEK 73
           V  ACS  G + EG+Q    +    +    I     ++ + G+ G +K A  + + M  K
Sbjct: 340 VLSACSHAGLVNEGLQCFNRMQFEHMIKPTIQHYGCMVDLMGRAGMLKEAYDLIKSMPIK 399

Query: 72  -SVASWSAIIGA 40
            +   W +++ A
Sbjct: 400 PNDVVWRSLLSA 411


>ref|XP_003516901.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31920-like [Glycine max]
          Length = 605

 Score =  337 bits (865), Expect = 1e-90
 Identities = 167/221 (75%), Positives = 186/221 (84%)
 Frame = -1

Query: 663 MTGTFVLSQTHXXXXXXXXXXXXXXSTSFNEKGWLSLLKRCKSMEEFKQVHAKVIKLGLF 484
           M+GT VL Q+H              +  FNE+GWLSLLKRCKSMEEFK+VHA ++KLGLF
Sbjct: 1   MSGTSVLCQSHLLSLPNSPLQSSELNAKFNEQGWLSLLKRCKSMEEFKKVHAHILKLGLF 60

Query: 483 WEDSFCGSNLVATCALTKWGSMEYACSIFRQIEDPGGFEYNTMIRGNVNDMNLEEALLLY 304
           + DSFCGSNLVA+CAL++WGSMEYACSIFRQIE+PG FEYNTMIRGNVN M+LEEALLLY
Sbjct: 61  Y-DSFCGSNLVASCALSRWGSMEYACSIFRQIEEPGSFEYNTMIRGNVNSMDLEEALLLY 119

Query: 303 VEMLERGIEPDNFTYPFVFKACSLLGALKEGMQIHGHVFKLGLEGGDIFVQNSLISMYGK 124
           VEMLERGIEPDNFTYPFV KACSLL ALKEG+QIH HVF  GLE  D+FVQN LISMYGK
Sbjct: 120 VEMLERGIEPDNFTYPFVLKACSLLVALKEGVQIHAHVFNAGLE-VDVFVQNGLISMYGK 178

Query: 123 CGAIKHACAVFEKMGEKSVASWSAIIGAHACEEIWHECLML 1
           CGAI+HA  VFE+M EKSVASWS+IIGAHA  E+WHECLML
Sbjct: 179 CGAIEHAGVVFEQMDEKSVASWSSIIGAHASVEMWHECLML 219



 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 51/187 (27%), Positives = 91/187 (48%), Gaps = 4/187 (2%)
 Frame = -1

Query: 555 LLKRCK---SMEEFKQVHAKVIKLGLFWEDSFCGSNLVATCALTKWGSMEYACSIFRQIE 385
           +LK C    +++E  Q+HA V   GL   D F  + L++     K G++E+A  +F Q++
Sbjct: 137 VLKACSLLVALKEGVQIHAHVFNAGLE-VDVFVQNGLISMYG--KCGAIEHAGVVFEQMD 193

Query: 384 DPGGFEYNTMIRGNVNDMNLEEALLLYVEMLERGIE-PDNFTYPFVFKACSLLGALKEGM 208
           +     ++++I  + +     E L+L  +M   G    +         AC+ LG+   G 
Sbjct: 194 EKSVASWSSIIGAHASVEMWHECLMLLGDMSREGRHRAEESILVSALSACTHLGSPNLGR 253

Query: 207 QIHGHVFKLGLEGGDIFVQNSLISMYGKCGAIKHACAVFEKMGEKSVASWSAIIGAHACE 28
            IHG + +  +   ++ V+ SLI MY KCG+++    VF+ M  K+  S++ +I   A  
Sbjct: 254 CIHGILLR-NISELNVVVKTSLIDMYVKCGSLEKGLCVFQNMAHKNRYSYTVMIAGLAIH 312

Query: 27  EIWHECL 7
               E L
Sbjct: 313 GRGREAL 319



 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 1/132 (0%)
 Frame = -1

Query: 432 KWGSMEYACSIFRQIEDPGGFEYNTMIRGNVNDMNLEEALLLYVEMLERGIEPDNFTYPF 253
           K GS+E    +F+ +     + Y  MI G        EAL ++ +MLE G+ PD+  Y  
Sbjct: 280 KCGSLEKGLCVFQNMAHKNRYSYTVMIAGLAIHGRGREALRVFSDMLEEGLTPDDVVYVG 339

Query: 252 VFKACSLLGALKEGMQIHGHVFKLGLEGGDIFVQNSLISMYGKCGAIKHACAVFEKMGEK 73
           V  ACS  G +KEG Q    +    +    I     ++ + G+ G +K A  + + M  K
Sbjct: 340 VLSACSHAGLVKEGFQCFNRMQFEHMIKPTIQHYGCMVDLMGRAGMLKEAYDLIKSMPIK 399

Query: 72  -SVASWSAIIGA 40
            +   W +++ A
Sbjct: 400 PNDVVWRSLLSA 411


>ref|XP_003533450.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31920-like [Glycine max]
          Length = 604

 Score =  336 bits (862), Expect = 3e-90
 Identities = 169/221 (76%), Positives = 186/221 (84%)
 Frame = -1

Query: 663 MTGTFVLSQTHXXXXXXXXXXXXXXSTSFNEKGWLSLLKRCKSMEEFKQVHAKVIKLGLF 484
           M+ T VL Q+H              +  FN +G LSLLKRCKSMEEFKQVHA ++KLGLF
Sbjct: 1   MSWTSVLCQSHFLSLPNNPPQSSELNAKFNVQG-LSLLKRCKSMEEFKQVHAHILKLGLF 59

Query: 483 WEDSFCGSNLVATCALTKWGSMEYACSIFRQIEDPGGFEYNTMIRGNVNDMNLEEALLLY 304
           + DSFCGSNLVATCAL++WGSMEYACSIFRQIE+PG FEYNTMIRGNVN MNLEEALLLY
Sbjct: 60  Y-DSFCGSNLVATCALSRWGSMEYACSIFRQIEEPGSFEYNTMIRGNVNSMNLEEALLLY 118

Query: 303 VEMLERGIEPDNFTYPFVFKACSLLGALKEGMQIHGHVFKLGLEGGDIFVQNSLISMYGK 124
           VEMLERGIEPDNFTYPFV KACSLLGALKEG+QIH HVFK GLE GD+FVQN LI+MYGK
Sbjct: 119 VEMLERGIEPDNFTYPFVLKACSLLGALKEGVQIHAHVFKAGLE-GDVFVQNGLINMYGK 177

Query: 123 CGAIKHACAVFEKMGEKSVASWSAIIGAHACEEIWHECLML 1
           CGAI+HA  VFE+M EKSVASWS+IIGAHA  E+WHECLML
Sbjct: 178 CGAIEHASVVFEQMDEKSVASWSSIIGAHASVEMWHECLML 218



 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 49/174 (28%), Positives = 88/174 (50%), Gaps = 4/174 (2%)
 Frame = -1

Query: 555 LLKRCK---SMEEFKQVHAKVIKLGLFWEDSFCGSNLVATCALTKWGSMEYACSIFRQIE 385
           +LK C    +++E  Q+HA V K GL   D F  + L+      K G++E+A  +F Q++
Sbjct: 136 VLKACSLLGALKEGVQIHAHVFKAGLEG-DVFVQNGLINMYG--KCGAIEHASVVFEQMD 192

Query: 384 DPGGFEYNTMIRGNVNDMNLEEALLLYVEMLERGIE-PDNFTYPFVFKACSLLGALKEGM 208
           +     ++++I  + +     E L+L  +M   G    +         AC+ LG+   G 
Sbjct: 193 EKSVASWSSIIGAHASVEMWHECLMLLGDMSGEGRHRAEESILVSALSACTHLGSPNFGR 252

Query: 207 QIHGHVFKLGLEGGDIFVQNSLISMYGKCGAIKHACAVFEKMGEKSVASWSAII 46
            IHG + +  +   ++ V+ SLI MY K G+++    VF+ M +K+  S++ II
Sbjct: 253 CIHGILLR-NISELNVAVKTSLIDMYVKSGSLEKGLCVFQNMAQKNRYSYTVII 305


>ref|XP_003612704.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355514039|gb|AES95662.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 572

 Score =  291 bits (746), Expect = 8e-77
 Identities = 138/178 (77%), Positives = 158/178 (88%)
 Frame = -1

Query: 534 MEEFKQVHAKVIKLGLFWEDSFCGSNLVATCALTKWGSMEYACSIFRQIEDPGGFEYNTM 355
           MEEFKQVHA V+K G+F+ D+FC SNLVATCALTKWGSM+YACSIF QI++P  F+YNTM
Sbjct: 11  MEEFKQVHAHVLKCGIFF-DTFCMSNLVATCALTKWGSMDYACSIFTQIDEPSSFDYNTM 69

Query: 354 IRGNVNDMNLEEALLLYVEMLERGIEPDNFTYPFVFKACSLLGALKEGMQIHGHVFKLGL 175
           IRGNVNDM LEEALLLYV+M+ERG+EPD FTYPFV KACSLLG + EG+Q+HGHVFK+GL
Sbjct: 70  IRGNVNDMKLEEALLLYVDMIERGVEPDKFTYPFVLKACSLLGVVDEGIQVHGHVFKMGL 129

Query: 174 EGGDIFVQNSLISMYGKCGAIKHACAVFEKMGEKSVASWSAIIGAHACEEIWHECLML 1
           E GD+ VQNSLI+MYGKCG IK+AC VF  M EKSVASWSAIIGAHAC E+W+ECLML
Sbjct: 130 E-GDVIVQNSLINMYGKCGEIKNACDVFNGMDEKSVASWSAIIGAHACVEMWNECLML 186



 Score = 59.3 bits (142), Expect = 9e-07
 Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 6/180 (3%)
 Frame = -1

Query: 555 LLKRCKSM---EEFKQVHAKVIKLGLFWEDSFCGS--NLVATCALTKWGSMEYACSIFRQ 391
           +LK C  +   +E  QVH  V K+GL  +     S  N+   C     G ++ AC +F  
Sbjct: 104 VLKACSLLGVVDEGIQVHGHVFKMGLEGDVIVQNSLINMYGKC-----GEIKNACDVFNG 158

Query: 390 IEDPGGFEYNTMIRGNVNDMNLEEALLLYVEMLERG-IEPDNFTYPFVFKACSLLGALKE 214
           +++     ++ +I  +       E L+L  +M   G    +  T   V  AC+ LG+   
Sbjct: 159 MDEKSVASWSAIIGAHACVEMWNECLMLLGKMSSEGRCRVEESTLVNVLSACTHLGSPDL 218

Query: 213 GMQIHGHVFKLGLEGGDIFVQNSLISMYGKCGAIKHACAVFEKMGEKSVASWSAIIGAHA 34
           G  IHG + +  +   ++ V+ SLI MY K G ++    VF+ M EK+  S++ +I   A
Sbjct: 219 GKCIHGILLR-NISELNVVVKTSLIDMYVKSGCLEKGLRVFKNMSEKNRYSYTVMISGLA 277



 Score = 59.3 bits (142), Expect = 9e-07
 Identities = 37/133 (27%), Positives = 67/133 (50%), Gaps = 2/133 (1%)
 Frame = -1

Query: 432 KWGSMEYACSIFRQIEDPGGFEYNTMIRGNVNDMNLEEALLLYVEMLERGIEPDNFTYPF 253
           K G +E    +F+ + +   + Y  MI G       +EAL ++ EM+E G+ PD+  Y  
Sbjct: 247 KSGCLEKGLRVFKNMSEKNRYSYTVMISGLAIHGRGKEALKVFSEMIEEGLAPDDVVYVG 306

Query: 252 VFKACSLLGALKEGMQIHGHV-FKLGLEGGDIFVQNSLISMYGKCGAIKHACAVFEKMGE 76
           VF ACS  G ++EG+Q    + F+  +E   +     ++ + G+ G +K A  + + M  
Sbjct: 307 VFSACSHAGLVEEGLQCFKSMQFEHKIE-PTVQHYGCMVDLLGRFGMLKEAYELIKSMSI 365

Query: 75  K-SVASWSAIIGA 40
           K +   W +++ A
Sbjct: 366 KPNDVIWRSLLSA 378


>ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31920
           [Vitis vinifera] gi|297742017|emb|CBI33804.3| unnamed
           protein product [Vitis vinifera]
          Length = 605

 Score =  271 bits (694), Expect = 9e-71
 Identities = 135/221 (61%), Positives = 165/221 (74%)
 Frame = -1

Query: 663 MTGTFVLSQTHXXXXXXXXXXXXXXSTSFNEKGWLSLLKRCKSMEEFKQVHAKVIKLGLF 484
           M  T VL QTH              S    EK  +SLLK+C +MEEFKQ HA+++KLGLF
Sbjct: 1   MIRTSVLHQTHVLVSREDPPQSPELSFKLGEKECVSLLKKCSNMEEFKQSHARILKLGLF 60

Query: 483 WEDSFCGSNLVATCALTKWGSMEYACSIFRQIEDPGGFEYNTMIRGNVNDMNLEEALLLY 304
             DSFC SNLVATCAL+ WGSM+YACSIFRQ+++ G F++NTM+RG+V DMN EEAL+ Y
Sbjct: 61  G-DSFCASNLVATCALSDWGSMDYACSIFRQMDELGSFQFNTMMRGHVKDMNTEEALITY 119

Query: 303 VEMLERGIEPDNFTYPFVFKACSLLGALKEGMQIHGHVFKLGLEGGDIFVQNSLISMYGK 124
            EM ERG++PDNFTYP + KAC+ L A++EGMQ+H H+ KLGLE  D+FVQNSLISMYGK
Sbjct: 120 KEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVHAHILKLGLE-NDVFVQNSLISMYGK 178

Query: 123 CGAIKHACAVFEKMGEKSVASWSAIIGAHACEEIWHECLML 1
           CG I   CAVFE+M E+SVASWSA+I AHA   +W +CL L
Sbjct: 179 CGEIGVCCAVFEQMNERSVASWSALITAHASLGMWSDCLRL 219



 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 57/190 (30%), Positives = 96/190 (50%), Gaps = 4/190 (2%)
 Frame = -1

Query: 558 SLLKRCK---SMEEFKQVHAKVIKLGLFWEDSFCGSNLVATCALTKWGSMEYACSIFRQI 388
           +LLK C    ++EE  QVHA ++KLGL   D F  ++L++     K G +   C++F Q+
Sbjct: 136 TLLKACARLPAVEEGMQVHAHILKLGLE-NDVFVQNSLISMYG--KCGEIGVCCAVFEQM 192

Query: 387 EDPGGFEYNTMIRGNVNDMNLEEALLLYVEMLERGI-EPDNFTYPFVFKACSLLGALKEG 211
            +     ++ +I  + +     + L L  +M   G    +      V  AC+ LGAL  G
Sbjct: 193 NERSVASWSALITAHASLGMWSDCLRLLGDMSNEGYWRAEESILVSVLSACTHLGALDLG 252

Query: 210 MQIHGHVFKLGLEGGDIFVQNSLISMYGKCGAIKHACAVFEKMGEKSVASWSAIIGAHAC 31
             +HG + +  + G ++ V+ SLI MY KCG++     +F+KM +K+  S+S +I   A 
Sbjct: 253 RSVHGFLLR-NVSGLNVIVETSLIEMYLKCGSLYKGMCLFQKMAKKNKLSYSVMISGLAM 311

Query: 30  EEIWHECLML 1
                E L +
Sbjct: 312 HGYGREGLRI 321



 Score = 59.3 bits (142), Expect = 9e-07
 Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 8/150 (5%)
 Frame = -1

Query: 465 GSNLVATCALT----KWGSMEYACSIFRQIEDPGGFEYNTMIRGNVNDMNLEEALLLYVE 298
           G N++   +L     K GS+     +F+++       Y+ MI G        E L ++ E
Sbjct: 265 GLNVIVETSLIEMYLKCGSLYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTE 324

Query: 297 MLERGIEPDNFTYPFVFKACSLLGALKEGMQIHGHVFKLGLEGG---DIFVQNSLISMYG 127
           MLE+G+EPD+  Y  V  ACS  G ++EG+Q      ++ LE G    I     ++ + G
Sbjct: 325 MLEQGLEPDDIVYVGVLNACSHAGLVQEGLQCFN---RMKLEHGIEPTIQHYGCMVDLMG 381

Query: 126 KCGAIKHACAVFEKMG-EKSVASWSAIIGA 40
           + G I  A  + + M  E +   W +++ A
Sbjct: 382 RAGKIDEALELIKSMPMEPNDVLWRSLLSA 411