BLASTX nr result

ID: Glycyrrhiza24_contig00001297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00001297
         (2084 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549495.1| PREDICTED: xylose isomerase-like [Glycine max]    871   0.0  
ref|XP_003610179.1| Xylose isomerase [Medicago truncatula] gi|35...   865   0.0  
gb|AFK39166.1| unknown [Medicago truncatula]                          861   0.0  
emb|CBI17768.3| unnamed protein product [Vitis vinifera]              837   0.0  
ref|XP_002277520.2| PREDICTED: xylose isomerase-like [Vitis vini...   835   0.0  

>ref|XP_003549495.1| PREDICTED: xylose isomerase-like [Glycine max]
          Length = 480

 Score =  871 bits (2250), Expect = 0.0
 Identities = 418/479 (87%), Positives = 437/479 (91%)
 Frame = +3

Query: 354  MKMKSGKIXXXXXXXNVFCYAVIAAPETCPAKDVGNCGDSDDWEGEFFPDIPKIKYEGPS 533
            MKMK  K         +FCYAVI AP+TCPA +   CGDSD+W+GEFFPDIPKIKYEGPS
Sbjct: 2    MKMKLVKTLLLLLCVKLFCYAVIGAPQTCPANNEDKCGDSDEWKGEFFPDIPKIKYEGPS 61

Query: 534  SKNPLSYKWYNAEEEILGKKMKDWFRFSVAFWHTFRGTGGDPFGAPTKYWPWEDGTNSLN 713
            SKN LS+KWYNAEEEILGKKMKDW RFSVAFWHTFRGTG DPFGAPTKYW WEDGTNSLN
Sbjct: 62   SKNVLSFKWYNAEEEILGKKMKDWLRFSVAFWHTFRGTGADPFGAPTKYWLWEDGTNSLN 121

Query: 714  MAKRRMRANFEFINKLGVDFWCFHDRDIAPDGKTLEETNANLDEVVALAKELQTKGKKSV 893
            MAKRRMRANFEFI+KLGVDFWCFHDRDIAPDGKTLEE+NANLDEVVALA+ELQTK KK V
Sbjct: 122  MAKRRMRANFEFISKLGVDFWCFHDRDIAPDGKTLEESNANLDEVVALAQELQTKAKKRV 181

Query: 894  LWGTAQLFMHPRYMHGGATSSELXXXXXXXXXXXXXMEVTHYLGGENYVFWGGREGYQSL 1073
            LWGTAQLFMHPRYMHG ATSSEL             +EVTHYLGGENYVFWGGREGYQSL
Sbjct: 182  LWGTAQLFMHPRYMHGAATSSELKVYAYAAAQVKKAIEVTHYLGGENYVFWGGREGYQSL 241

Query: 1074 LNTDMERELNHLARFLEAAVAHKKKIGFNGTLLIEPKPQEPTKHQYDWDAATTANFLRKY 1253
            LNTDMERELNHLARF EAAVA+KKKIGFNGT LIEPKPQEPTKHQYDWDAAT+ANFLRKY
Sbjct: 242  LNTDMERELNHLARFFEAAVAYKKKIGFNGTFLIEPKPQEPTKHQYDWDAATSANFLRKY 301

Query: 1254 GLIGEFKLNIECNHATLSGHSCHHELETARINGLLGNIDANTGDPQVGWDTDQFLVDIQE 1433
            GL GEFKLNIECNHATLSGHSCHHELETARINGLLGNIDANTGDPQVGWDTDQFLVDIQE
Sbjct: 302  GLTGEFKLNIECNHATLSGHSCHHELETARINGLLGNIDANTGDPQVGWDTDQFLVDIQE 361

Query: 1434 ATMIMLSIIRNGGIAPGGFNFDAKLRRESTDVEDLFIAHIVGIDTMARGLRNAAKLIEDG 1613
            AT+IMLS+IRNGG+APGGFNFDAKLRRESTDVEDLFIAHIVG+DT+ARGLRNAAKLIEDG
Sbjct: 362  ATLIMLSVIRNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTLARGLRNAAKLIEDG 421

Query: 1614 SLAELVRKRYQSFDTEIGAQIEAGKADFEMLEKKAKEWGEPKVASAKQELAEMIFQSAM 1790
            SLAELVRKRYQSFDTEIGAQIEAGKADFE+LEKK KEWGEPKVASAKQELAEMI QS +
Sbjct: 422  SLAELVRKRYQSFDTEIGAQIEAGKADFELLEKKVKEWGEPKVASAKQELAEMILQSVL 480


>ref|XP_003610179.1| Xylose isomerase [Medicago truncatula] gi|355511234|gb|AES92376.1|
            Xylose isomerase [Medicago truncatula]
          Length = 478

 Score =  865 bits (2236), Expect = 0.0
 Identities = 417/478 (87%), Positives = 433/478 (90%), Gaps = 1/478 (0%)
 Frame = +3

Query: 360  MKSGKIXXXXXXXNVFCYAVI-AAPETCPAKDVGNCGDSDDWEGEFFPDIPKIKYEGPSS 536
            MKSGK+       NVF YA +  AP+TCPA     CGDSDDW+ EFFP I KIKYEGPSS
Sbjct: 1    MKSGKLLLLLLSFNVFYYAAVNCAPQTCPATKDAKCGDSDDWKAEFFPGISKIKYEGPSS 60

Query: 537  KNPLSYKWYNAEEEILGKKMKDWFRFSVAFWHTFRGTGGDPFGAPTKYWPWEDGTNSLNM 716
            KNPLS+KWYN EEEILGKKMKDWFRFSVAFWHTFRGTG DPFGAPTKYWPWEDGTNSL+M
Sbjct: 61   KNPLSFKWYNPEEEILGKKMKDWFRFSVAFWHTFRGTGVDPFGAPTKYWPWEDGTNSLSM 120

Query: 717  AKRRMRANFEFINKLGVDFWCFHDRDIAPDGKTLEETNANLDEVVALAKELQTKGKKSVL 896
            AKRRMRANFEFINKLGVDFWCFHDRDIAPDGKT+EE+N NLDEVVALA ELQ + KK VL
Sbjct: 121  AKRRMRANFEFINKLGVDFWCFHDRDIAPDGKTIEESNENLDEVVALAHELQRQSKKRVL 180

Query: 897  WGTAQLFMHPRYMHGGATSSELXXXXXXXXXXXXXMEVTHYLGGENYVFWGGREGYQSLL 1076
            WGTAQLF+HPRYMHG ATSSEL             +EVTHYLGGENYVFWGGREGYQSLL
Sbjct: 181  WGTAQLFVHPRYMHGAATSSELAVYAYAAAQVKKALEVTHYLGGENYVFWGGREGYQSLL 240

Query: 1077 NTDMERELNHLARFLEAAVAHKKKIGFNGTLLIEPKPQEPTKHQYDWDAATTANFLRKYG 1256
            NTDMERELNHLARF EAAVAHKKKIGFNGT LIEPKPQEPTKHQYDWDAAT ANFLRKYG
Sbjct: 241  NTDMERELNHLARFFEAAVAHKKKIGFNGTFLIEPKPQEPTKHQYDWDAATAANFLRKYG 300

Query: 1257 LIGEFKLNIECNHATLSGHSCHHELETARINGLLGNIDANTGDPQVGWDTDQFLVDIQEA 1436
            LIGEFKLNIECNHATLSGHSCHHELETARINGLLGNIDANTGDPQVGWDTDQFLVDIQEA
Sbjct: 301  LIGEFKLNIECNHATLSGHSCHHELETARINGLLGNIDANTGDPQVGWDTDQFLVDIQEA 360

Query: 1437 TMIMLSIIRNGGIAPGGFNFDAKLRRESTDVEDLFIAHIVGIDTMARGLRNAAKLIEDGS 1616
            TMIMLS+IRNGGIAPGGFNFDAKLRRESTDVEDLFIAHIVG+DTMARGLRNAAKL+EDGS
Sbjct: 361  TMIMLSVIRNGGIAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTMARGLRNAAKLVEDGS 420

Query: 1617 LAELVRKRYQSFDTEIGAQIEAGKADFEMLEKKAKEWGEPKVASAKQELAEMIFQSAM 1790
            LAELVRKRYQSFDTEIGAQIEAGKADF+ LEKK KEWGEPKVASAKQELAEMIFQ+AM
Sbjct: 421  LAELVRKRYQSFDTEIGAQIEAGKADFDFLEKKVKEWGEPKVASAKQELAEMIFQNAM 478


>gb|AFK39166.1| unknown [Medicago truncatula]
          Length = 480

 Score =  861 bits (2224), Expect = 0.0
 Identities = 415/480 (86%), Positives = 433/480 (90%), Gaps = 1/480 (0%)
 Frame = +3

Query: 354  MKMKSGKIXXXXXXXNVFCYAVI-AAPETCPAKDVGNCGDSDDWEGEFFPDIPKIKYEGP 530
            M MKSGK+       NVF YA +  AP+TCPA     CGDSDDW+ EFFP I KIKYEGP
Sbjct: 1    MIMKSGKLLLLLLSFNVFYYAAVNCAPQTCPATKDAKCGDSDDWKAEFFPGISKIKYEGP 60

Query: 531  SSKNPLSYKWYNAEEEILGKKMKDWFRFSVAFWHTFRGTGGDPFGAPTKYWPWEDGTNSL 710
            SSKNPLS+KW+N EEEILGKKMKDWFRFSVAFWHTFRGTG DPFGAPTKYWPWEDGTNSL
Sbjct: 61   SSKNPLSFKWHNPEEEILGKKMKDWFRFSVAFWHTFRGTGVDPFGAPTKYWPWEDGTNSL 120

Query: 711  NMAKRRMRANFEFINKLGVDFWCFHDRDIAPDGKTLEETNANLDEVVALAKELQTKGKKS 890
            +MAKRRMRANFEFINKLGVDFWCFHDRDIAPDGKT+EE+N NLDEVVALA ELQ + KK 
Sbjct: 121  SMAKRRMRANFEFINKLGVDFWCFHDRDIAPDGKTIEESNENLDEVVALAHELQRQSKKR 180

Query: 891  VLWGTAQLFMHPRYMHGGATSSELXXXXXXXXXXXXXMEVTHYLGGENYVFWGGREGYQS 1070
            VLWGTAQLF+HPRYMHG ATSSEL             +EVTHYLGGENYVFWGGREGYQS
Sbjct: 181  VLWGTAQLFVHPRYMHGAATSSELAVYAYAAAQVKKALEVTHYLGGENYVFWGGREGYQS 240

Query: 1071 LLNTDMERELNHLARFLEAAVAHKKKIGFNGTLLIEPKPQEPTKHQYDWDAATTANFLRK 1250
            LLNTDMERELNHLARF EAAVAHKKKIGFNGT LIEPKPQEPTKHQYDWDAAT ANFLRK
Sbjct: 241  LLNTDMERELNHLARFFEAAVAHKKKIGFNGTFLIEPKPQEPTKHQYDWDAATAANFLRK 300

Query: 1251 YGLIGEFKLNIECNHATLSGHSCHHELETARINGLLGNIDANTGDPQVGWDTDQFLVDIQ 1430
            YGLIGEFKLNIECNHATLSGHSCHHELETARINGLLGNIDANTGDPQVGWDT+QFLVDIQ
Sbjct: 301  YGLIGEFKLNIECNHATLSGHSCHHELETARINGLLGNIDANTGDPQVGWDTNQFLVDIQ 360

Query: 1431 EATMIMLSIIRNGGIAPGGFNFDAKLRRESTDVEDLFIAHIVGIDTMARGLRNAAKLIED 1610
            EATMIMLS+IRNGGIAPGGFNFD KLRRESTDVEDLFIAHIVG+DTMARGLRNAAKL+ED
Sbjct: 361  EATMIMLSVIRNGGIAPGGFNFDVKLRRESTDVEDLFIAHIVGMDTMARGLRNAAKLVED 420

Query: 1611 GSLAELVRKRYQSFDTEIGAQIEAGKADFEMLEKKAKEWGEPKVASAKQELAEMIFQSAM 1790
            GSLAELVRKRYQSFDTEIGAQIEAGKADF+ LEKK KEWGEPKVASAKQELAEMIFQ+AM
Sbjct: 421  GSLAELVRKRYQSFDTEIGAQIEAGKADFDFLEKKVKEWGEPKVASAKQELAEMIFQNAM 480


>emb|CBI17768.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score =  837 bits (2162), Expect = 0.0
 Identities = 406/480 (84%), Positives = 430/480 (89%), Gaps = 2/480 (0%)
 Frame = +3

Query: 357  KMKSGKIXXXXXXXNVFCYAVIAA-PETCPAKDVGN-CGDSDDWEGEFFPDIPKIKYEGP 530
            KM +GK+       NV  +AVIA+ P+TCPA DV + CG SD+WEGEFFP IPKIKYEGP
Sbjct: 48   KMMAGKVFLFLLCLNVVSFAVIASSPQTCPADDVSSKCGASDEWEGEFFPGIPKIKYEGP 107

Query: 531  SSKNPLSYKWYNAEEEILGKKMKDWFRFSVAFWHTFRGTGGDPFGAPTKYWPWEDGTNSL 710
            SSKNPLSYKWYNA+EEILGKKMKDW RFSVAFWHTFRGTGGDPFGAPTK+WPWEDGT+SL
Sbjct: 108  SSKNPLSYKWYNADEEILGKKMKDWMRFSVAFWHTFRGTGGDPFGAPTKFWPWEDGTDSL 167

Query: 711  NMAKRRMRANFEFINKLGVDFWCFHDRDIAPDGKTLEETNANLDEVVALAKELQTKGKKS 890
             MAKRRMRANFEFI KLGVD WCFHDRDIAPDGKTLEE NANLDEVVALAKELQ K K  
Sbjct: 168  AMAKRRMRANFEFIEKLGVDLWCFHDRDIAPDGKTLEEANANLDEVVALAKELQGK-KIH 226

Query: 891  VLWGTAQLFMHPRYMHGGATSSELXXXXXXXXXXXXXMEVTHYLGGENYVFWGGREGYQS 1070
             LWGTAQLF HPRYMHGGATSSE+             MEVTHYLGGENYVFWGGREGYQ+
Sbjct: 227  PLWGTAQLFHHPRYMHGGATSSEVAVYAYAAAQVKKAMEVTHYLGGENYVFWGGREGYQT 286

Query: 1071 LLNTDMERELNHLARFLEAAVAHKKKIGFNGTLLIEPKPQEPTKHQYDWDAATTANFLRK 1250
            LLNTDM REL+HLARFLEAA A+KKKIGFNGTLLIEPKPQEPTKHQYDWDAATTANFLRK
Sbjct: 287  LLNTDMGRELDHLARFLEAAAAYKKKIGFNGTLLIEPKPQEPTKHQYDWDAATTANFLRK 346

Query: 1251 YGLIGEFKLNIECNHATLSGHSCHHELETARINGLLGNIDANTGDPQVGWDTDQFLVDIQ 1430
            YGLIGEFKLNIECNHATLSGHSCHHELETAR+NGLLGNIDANTGDPQ+GWDTDQFL DI 
Sbjct: 347  YGLIGEFKLNIECNHATLSGHSCHHELETARLNGLLGNIDANTGDPQIGWDTDQFLTDIA 406

Query: 1431 EATMIMLSIIRNGGIAPGGFNFDAKLRRESTDVEDLFIAHIVGIDTMARGLRNAAKLIED 1610
            EATM+MLS++RNGG+APGGFNFDAKLRRESTDVEDLFI+HI G+DT+ARGLRN AKLIED
Sbjct: 407  EATMVMLSVVRNGGLAPGGFNFDAKLRRESTDVEDLFISHISGMDTLARGLRNVAKLIED 466

Query: 1611 GSLAELVRKRYQSFDTEIGAQIEAGKADFEMLEKKAKEWGEPKVASAKQELAEMIFQSAM 1790
            GSL  LVRKRYQSFDTEIGAQIEAGKADFEMLEKKA EWGEPKV SAKQELAEMIFQSA+
Sbjct: 467  GSLENLVRKRYQSFDTEIGAQIEAGKADFEMLEKKAMEWGEPKVPSAKQELAEMIFQSAL 526


>ref|XP_002277520.2| PREDICTED: xylose isomerase-like [Vitis vinifera]
          Length = 478

 Score =  835 bits (2157), Expect = 0.0
 Identities = 405/479 (84%), Positives = 429/479 (89%), Gaps = 2/479 (0%)
 Frame = +3

Query: 360  MKSGKIXXXXXXXNVFCYAVIAA-PETCPAKDVGN-CGDSDDWEGEFFPDIPKIKYEGPS 533
            M +GK+       NV  +AVIA+ P+TCPA DV + CG SD+WEGEFFP IPKIKYEGPS
Sbjct: 1    MMAGKVFLFLLCLNVVSFAVIASSPQTCPADDVSSKCGASDEWEGEFFPGIPKIKYEGPS 60

Query: 534  SKNPLSYKWYNAEEEILGKKMKDWFRFSVAFWHTFRGTGGDPFGAPTKYWPWEDGTNSLN 713
            SKNPLSYKWYNA+EEILGKKMKDW RFSVAFWHTFRGTGGDPFGAPTK+WPWEDGT+SL 
Sbjct: 61   SKNPLSYKWYNADEEILGKKMKDWMRFSVAFWHTFRGTGGDPFGAPTKFWPWEDGTDSLA 120

Query: 714  MAKRRMRANFEFINKLGVDFWCFHDRDIAPDGKTLEETNANLDEVVALAKELQTKGKKSV 893
            MAKRRMRANFEFI KLGVD WCFHDRDIAPDGKTLEE NANLDEVVALAKELQ K K   
Sbjct: 121  MAKRRMRANFEFIEKLGVDLWCFHDRDIAPDGKTLEEANANLDEVVALAKELQGK-KIHP 179

Query: 894  LWGTAQLFMHPRYMHGGATSSELXXXXXXXXXXXXXMEVTHYLGGENYVFWGGREGYQSL 1073
            LWGTAQLF HPRYMHGGATSSE+             MEVTHYLGGENYVFWGGREGYQ+L
Sbjct: 180  LWGTAQLFHHPRYMHGGATSSEVAVYAYAAAQVKKAMEVTHYLGGENYVFWGGREGYQTL 239

Query: 1074 LNTDMERELNHLARFLEAAVAHKKKIGFNGTLLIEPKPQEPTKHQYDWDAATTANFLRKY 1253
            LNTDM REL+HLARFLEAA A+KKKIGFNGTLLIEPKPQEPTKHQYDWDAATTANFLRKY
Sbjct: 240  LNTDMGRELDHLARFLEAAAAYKKKIGFNGTLLIEPKPQEPTKHQYDWDAATTANFLRKY 299

Query: 1254 GLIGEFKLNIECNHATLSGHSCHHELETARINGLLGNIDANTGDPQVGWDTDQFLVDIQE 1433
            GLIGEFKLNIECNHATLSGHSCHHELETAR+NGLLGNIDANTGDPQ+GWDTDQFL DI E
Sbjct: 300  GLIGEFKLNIECNHATLSGHSCHHELETARLNGLLGNIDANTGDPQIGWDTDQFLTDIAE 359

Query: 1434 ATMIMLSIIRNGGIAPGGFNFDAKLRRESTDVEDLFIAHIVGIDTMARGLRNAAKLIEDG 1613
            ATM+MLS++RNGG+APGGFNFDAKLRRESTDVEDLFI+HI G+DT+ARGLRN AKLIEDG
Sbjct: 360  ATMVMLSVVRNGGLAPGGFNFDAKLRRESTDVEDLFISHISGMDTLARGLRNVAKLIEDG 419

Query: 1614 SLAELVRKRYQSFDTEIGAQIEAGKADFEMLEKKAKEWGEPKVASAKQELAEMIFQSAM 1790
            SL  LVRKRYQSFDTEIGAQIEAGKADFEMLEKKA EWGEPKV SAKQELAEMIFQSA+
Sbjct: 420  SLENLVRKRYQSFDTEIGAQIEAGKADFEMLEKKAMEWGEPKVPSAKQELAEMIFQSAL 478


Top