BLASTX nr result

ID: Glycyrrhiza24_contig00001268 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00001268
         (789 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549378.1| PREDICTED: F-box protein At3g12350-like [Gly...   302   6e-80
ref|XP_003589057.1| F-box protein [Medicago truncatula] gi|35547...   297   2e-78
ref|XP_003545341.1| PREDICTED: F-box protein At3g12350-like [Gly...   282   5e-74
emb|CBI19395.3| unnamed protein product [Vitis vinifera]              214   2e-53
ref|XP_002283336.1| PREDICTED: F-box protein At3g12350 [Vitis vi...   214   2e-53

>ref|XP_003549378.1| PREDICTED: F-box protein At3g12350-like [Glycine max]
          Length = 444

 Score =  302 bits (773), Expect = 6e-80
 Identities = 144/189 (76%), Positives = 161/189 (85%)
 Frame = -3

Query: 787 PEHFVKIVNCSPTPSRPLQGLWKGICADMSLAFYLVAYDDIGGITCRQLGDPPERFSSNA 608
           P+HFVKIVNCSPTP+RPLQGLWKGIC DMSLAFYLV YDDIGGI CR++GDPP+RFS +A
Sbjct: 253 PQHFVKIVNCSPTPARPLQGLWKGICGDMSLAFYLVGYDDIGGIACRRIGDPPDRFSGHA 312

Query: 607 RVFWASNATXXXXXXXXXXXXLYDSRIHLRPPQPHNEIHEQFPFSDDEGVNRIQQAHLSD 428
            VFW SNAT            LYDSR+HLRP QP NE+ EQFPFSD E VN+IQQ  LSD
Sbjct: 313 PVFWTSNATFLESPFSPEEESLYDSRVHLRPLQPGNEVLEQFPFSDSEVVNQIQQFQLSD 372

Query: 427 NEVVNQILHISSSYDLVIPDLAGTMNPRSAEGRIWQYQDGTFGFGFIRDNFVIDMKHIVR 248
           N VV++ILHISSSYDLV+PDLAGT+NPRSAEGRIWQY++GTFGFGF+ DNFVIDMKHIV 
Sbjct: 373 N-VVDRILHISSSYDLVVPDLAGTLNPRSAEGRIWQYRNGTFGFGFLSDNFVIDMKHIVH 431

Query: 247 DGCIVDTVN 221
           +GCIVDTVN
Sbjct: 432 NGCIVDTVN 440


>ref|XP_003589057.1| F-box protein [Medicago truncatula] gi|355478105|gb|AES59308.1|
           F-box protein [Medicago truncatula]
          Length = 496

 Score =  297 bits (761), Expect = 2e-78
 Identities = 150/221 (67%), Positives = 161/221 (72%), Gaps = 32/221 (14%)
 Frame = -3

Query: 787 PEHFVKIVNCSPTPSRPLQGLWK--------------------------------GICAD 704
           PEHFVK+VNCSPT  RPLQGLWK                                GICAD
Sbjct: 270 PEHFVKVVNCSPTALRPLQGLWKVFLICSLLFMLNYVFSVENYNLIALVLGICHLGICAD 329

Query: 703 MSLAFYLVAYDDIGGITCRQLGDPPERFSSNARVFWASNATXXXXXXXXXXXXLYDSRIH 524
           +SLAFYLVAYDDIGGI CR+LGDPPERFS+ A VFW SNAT            LY SR+H
Sbjct: 330 LSLAFYLVAYDDIGGIACRRLGDPPERFSTYAPVFWTSNATFLEAPFPLEEESLYGSRVH 389

Query: 523 LRPPQPHNEIHEQFPFSDDEGVNRIQQAHLSDNEVVNQILHISSSYDLVIPDLAGTMNPR 344
           L+P QPHNE HEQFP SD EGVN IQQ +LSDNEVVN+ILHI+SSYDLVIPDLAG  NPR
Sbjct: 390 LQPVQPHNENHEQFPMSDVEGVNHIQQFYLSDNEVVNRILHINSSYDLVIPDLAGATNPR 449

Query: 343 SAEGRIWQYQDGTFGFGFIRDNFVIDMKHIVRDGCIVDTVN 221
           SAEGRIWQYQDGTFGFGF+RDNFVIDMK+IVRDGCIVD VN
Sbjct: 450 SAEGRIWQYQDGTFGFGFVRDNFVIDMKNIVRDGCIVDAVN 490


>ref|XP_003545341.1| PREDICTED: F-box protein At3g12350-like [Glycine max]
          Length = 435

 Score =  282 bits (722), Expect = 5e-74
 Identities = 139/189 (73%), Positives = 153/189 (80%)
 Frame = -3

Query: 787 PEHFVKIVNCSPTPSRPLQGLWKGICADMSLAFYLVAYDDIGGITCRQLGDPPERFSSNA 608
           P+HFVKIVNCSPTP+RPLQGLWKGIC DMSLAFYLVAYDDIGGI CR +GDPP+ FS  A
Sbjct: 244 PQHFVKIVNCSPTPARPLQGLWKGICGDMSLAFYLVAYDDIGGIACRWIGDPPDHFSGQA 303

Query: 607 RVFWASNATXXXXXXXXXXXXLYDSRIHLRPPQPHNEIHEQFPFSDDEGVNRIQQAHLSD 428
            VFW SNAT            LYDSR+HL+P Q  NE+ EQFP SD E VN+IQQ  LS 
Sbjct: 304 PVFWTSNATFLESPFSPEEESLYDSRVHLQPLQLGNEVLEQFPLSDCELVNQIQQFQLSG 363

Query: 427 NEVVNQILHISSSYDLVIPDLAGTMNPRSAEGRIWQYQDGTFGFGFIRDNFVIDMKHIVR 248
           N VVN+I HISSSYDLV+P LAGTMN RSAEGRIWQY++GTFGFGF+ DNFVIDMKHIV 
Sbjct: 364 N-VVNRIHHISSSYDLVVPGLAGTMNRRSAEGRIWQYRNGTFGFGFLSDNFVIDMKHIVH 422

Query: 247 DGCIVDTVN 221
           +GCIVDTVN
Sbjct: 423 NGCIVDTVN 431


>emb|CBI19395.3| unnamed protein product [Vitis vinifera]
          Length = 391

 Score =  214 bits (544), Expect = 2e-53
 Identities = 107/189 (56%), Positives = 129/189 (68%), Gaps = 1/189 (0%)
 Frame = -3

Query: 787 PEHFVKIVNCSPTPSRPLQGLWKGICADMSLAFYLVAYDDIGGITCRQLGDPPERFSSNA 608
           PEHFVKIVNCSPTPSRPLQGLWKGI  D +L F+LVAYDDIGGI CR +GD  +  S  +
Sbjct: 210 PEHFVKIVNCSPTPSRPLQGLWKGISDDKNLYFFLVAYDDIGGIACRTIGDSSKPLSGYS 269

Query: 607 RVFWASNATXXXXXXXXXXXXLYDSRIHLRPPQPHNEIHEQFPFSDDEGVNRIQQAHLSD 428
            VFW S  T            LYDSRIHLRP    + IHE  P              L++
Sbjct: 270 PVFWTSKTTFLEAPFSPEEEYLYDSRIHLRPLATADHIHEHHP--------------LTE 315

Query: 427 NEVVNQILHISSSYDLVIPDLAGT-MNPRSAEGRIWQYQDGTFGFGFIRDNFVIDMKHIV 251
           NEVV+ IL I+SSYDLVIPDLAGT  NPR  EGRIW Y+ GTFGFGF+R++F++D+KHI 
Sbjct: 316 NEVVSHILCINSSYDLVIPDLAGTSANPRDVEGRIWLYESGTFGFGFLRNHFIVDLKHIA 375

Query: 250 RDGCIVDTV 224
           + GC+++ +
Sbjct: 376 QHGCLLEAM 384


>ref|XP_002283336.1| PREDICTED: F-box protein At3g12350 [Vitis vinifera]
          Length = 469

 Score =  214 bits (544), Expect = 2e-53
 Identities = 107/189 (56%), Positives = 129/189 (68%), Gaps = 1/189 (0%)
 Frame = -3

Query: 787 PEHFVKIVNCSPTPSRPLQGLWKGICADMSLAFYLVAYDDIGGITCRQLGDPPERFSSNA 608
           PEHFVKIVNCSPTPSRPLQGLWKGI  D +L F+LVAYDDIGGI CR +GD  +  S  +
Sbjct: 288 PEHFVKIVNCSPTPSRPLQGLWKGISDDKNLYFFLVAYDDIGGIACRTIGDSSKPLSGYS 347

Query: 607 RVFWASNATXXXXXXXXXXXXLYDSRIHLRPPQPHNEIHEQFPFSDDEGVNRIQQAHLSD 428
            VFW S  T            LYDSRIHLRP    + IHE  P              L++
Sbjct: 348 PVFWTSKTTFLEAPFSPEEEYLYDSRIHLRPLATADHIHEHHP--------------LTE 393

Query: 427 NEVVNQILHISSSYDLVIPDLAGT-MNPRSAEGRIWQYQDGTFGFGFIRDNFVIDMKHIV 251
           NEVV+ IL I+SSYDLVIPDLAGT  NPR  EGRIW Y+ GTFGFGF+R++F++D+KHI 
Sbjct: 394 NEVVSHILCINSSYDLVIPDLAGTSANPRDVEGRIWLYESGTFGFGFLRNHFIVDLKHIA 453

Query: 250 RDGCIVDTV 224
           + GC+++ +
Sbjct: 454 QHGCLLEAM 462


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