BLASTX nr result

ID: Glycyrrhiza24_contig00001259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00001259
         (1002 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK42557.1| unknown [Lotus japonicus]                              153   6e-35
ref|NP_001235783.1| uncharacterized protein LOC100500282 [Glycin...   143   7e-32
ref|NP_001241516.1| uncharacterized protein LOC100809961 [Glycin...   132   2e-28
ref|XP_002532085.1| conserved hypothetical protein [Ricinus comm...   131   3e-28
ref|XP_003610078.1| hypothetical protein MTR_4g127690 [Medicago ...   129   9e-28

>gb|AFK42557.1| unknown [Lotus japonicus]
          Length = 196

 Score =  153 bits (387), Expect = 6e-35
 Identities = 97/182 (53%), Positives = 105/182 (57%), Gaps = 3/182 (1%)
 Frame = -1

Query: 813 FLTNALTPLINPKLRT---RSTPVKTTVYXXXXXXXXXXXPRKNEKNKLGKLAMVALAAG 643
           FLTN LTPL     RT    ST +KT +Y           P KNE NKL KLA+ ALAAG
Sbjct: 17  FLTNTLTPLTTSNFRTLHPSSTSLKT-IYCSSSQQKSPTPPSKNE-NKLAKLAIAALAAG 74

Query: 642 VLTLGSVHDASAAKTGGRVGGQAFXXXXXXXXXXXXXXXXXXIYVNPPVAPPLVXXXXXX 463
           VLTLGSVHDASAAK+GGR+GGQ+F                   YVNP VAPPLV      
Sbjct: 75  VLTLGSVHDASAAKSGGRIGGQSFKSSAPRSAPRINNNSRTNTYVNPRVAPPLVGGYGYG 134

Query: 462 XXXXXXXXXXWSPFSFFXXXXXXXXXXXXGFDTIVLFMLLGAGAAVVRRFLRSRNEDDDD 283
                     WSPFSFF            GFDTIVLFMLLGAGAAVVRRF R +N+DDDD
Sbjct: 135 YGVPSYGGWGWSPFSFFAPGPSVAVGVGGGFDTIVLFMLLGAGAAVVRRFFRPKNDDDDD 194

Query: 282 DY 277
           DY
Sbjct: 195 DY 196


>ref|NP_001235783.1| uncharacterized protein LOC100500282 [Glycine max]
           gi|255629930|gb|ACU15317.1| unknown [Glycine max]
          Length = 189

 Score =  143 bits (360), Expect = 7e-32
 Identities = 96/179 (53%), Positives = 102/179 (56%), Gaps = 3/179 (1%)
 Frame = -1

Query: 813 FLTNALTPLI-NPKLRTRSTPVKT--TVYXXXXXXXXXXXPRKNEKNKLGKLAMVALAAG 643
           FLTNAL PL  NPK RT  T   +  TV            PRK  +NKL KLA+VALAAG
Sbjct: 11  FLTNALIPLTHNPKFRTTVTFPSSLKTVSCSSPQHEQQQSPRKKNENKLAKLAIVALAAG 70

Query: 642 VLTLGSVHDASAAKTGGRVGGQAFXXXXXXXXXXXXXXXXXXIYVNPPVAPPLVXXXXXX 463
           VLTLGSVHDASAAKTGGR+GGQAF                  IY+NP VAPPLV      
Sbjct: 71  VLTLGSVHDASAAKTGGRIGGQAF-KSAAPRSSPRINNSRTNIYINPRVAPPLVGGYGYG 129

Query: 462 XXXXXXXXXXWSPFSFFXXXXXXXXXXXXGFDTIVLFMLLGAGAAVVRRFLRSRNEDDD 286
                     WSPFSFF            GFDTI+LFM LGA AAVVRRF  SRNEDDD
Sbjct: 130 YGVPFYGGWGWSPFSFFAPGPSVAVGVGGGFDTILLFMFLGAAAAVVRRFFGSRNEDDD 188


>ref|NP_001241516.1| uncharacterized protein LOC100809961 [Glycine max]
           gi|255633768|gb|ACU17244.1| unknown [Glycine max]
          Length = 176

 Score =  132 bits (331), Expect = 2e-28
 Identities = 89/176 (50%), Positives = 96/176 (54%)
 Frame = -1

Query: 813 FLTNALTPLINPKLRTRSTPVKTTVYXXXXXXXXXXXPRKNEKNKLGKLAMVALAAGVLT 634
           FLTNAL P   PK RT      T +             +KN +NKL KLAMVA+A GVLT
Sbjct: 15  FLTNALIP---PKFRT------TRISIVSCSSPQQSPRKKNNENKLAKLAMVAVAVGVLT 65

Query: 633 LGSVHDASAAKTGGRVGGQAFXXXXXXXXXXXXXXXXXXIYVNPPVAPPLVXXXXXXXXX 454
           LGSVHDASAAKTGGR+GGQAF                  IY+NP VAPPLV         
Sbjct: 66  LGSVHDASAAKTGGRIGGQAF-KSAAPRSAPRINNSRTNIYINPRVAPPLV-----GGYG 119

Query: 453 XXXXXXXWSPFSFFXXXXXXXXXXXXGFDTIVLFMLLGAGAAVVRRFLRSRNEDDD 286
                  WSPFSFF            GFDTI+LFM LG  AAVVRRF  SRNEDDD
Sbjct: 120 YGYGGWGWSPFSFFAPGPSVAVGVGGGFDTILLFMFLGVAAAVVRRFFGSRNEDDD 175


>ref|XP_002532085.1| conserved hypothetical protein [Ricinus communis]
           gi|223528245|gb|EEF30299.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 184

 Score =  131 bits (329), Expect = 3e-28
 Identities = 85/176 (48%), Positives = 96/176 (54%), Gaps = 1/176 (0%)
 Frame = -1

Query: 813 FLTNALTPLIN-PKLRTRSTPVKTTVYXXXXXXXXXXXPRKNEKNKLGKLAMVALAAGVL 637
           F  N+L PLI  PK +  ST   +T+             R   +NKL KLA+V LAAGVL
Sbjct: 12  FFANSLAPLIQKPKTKLVST---STISCKHSQDDHNDSGRTKRENKLAKLAIVTLAAGVL 68

Query: 636 TLGSVHDASAAKTGGRVGGQAFXXXXXXXXXXXXXXXXXXIYVNPPVAPPLVXXXXXXXX 457
           TLGSV DASAAK+GGRVGGQAF                  IYVNPPVAPPLV        
Sbjct: 69  TLGSVGDASAAKSGGRVGGQAFRSSAPRSSPRINNNSRTNIYVNPPVAPPLVGGYGYGYG 128

Query: 456 XXXXXXXXWSPFSFFXXXXXXXXXXXXGFDTIVLFMLLGAGAAVVRRFLRSRNEDD 289
                   WSPFSFF            GFDT+VLFM LGA AAV+RRF  SR+ED+
Sbjct: 129 VPFYGGWGWSPFSFFAPGPGVAVGIGGGFDTLVLFMFLGAAAAVIRRFFGSRDEDE 184


>ref|XP_003610078.1| hypothetical protein MTR_4g127690 [Medicago truncatula]
           gi|217075138|gb|ACJ85929.1| unknown [Medicago
           truncatula] gi|355511133|gb|AES92275.1| hypothetical
           protein MTR_4g127690 [Medicago truncatula]
           gi|388510946|gb|AFK43539.1| unknown [Medicago
           truncatula]
          Length = 196

 Score =  129 bits (325), Expect = 9e-28
 Identities = 85/184 (46%), Positives = 96/184 (52%), Gaps = 10/184 (5%)
 Frame = -1

Query: 798 LTPLINPKLRTRSTPVKTTVYXXXXXXXXXXXP-------RKNEKNKLGKLAMVALAAGV 640
           L  L+NP  R+  T     VY                   RK  +NKLGKLAM+A+AAGV
Sbjct: 13  LPTLLNPNFRSSRTRKTVVVYCSCTQPQHDDQQQQSLTPLRKKNENKLGKLAMIAVAAGV 72

Query: 639 LTLGSVHDASAAKTGGRVGGQAF--XXXXXXXXXXXXXXXXXXIYVNPPVAPPLVXXXXX 466
           LT GSVHDASAAKTGGR+GGQ+F                    IY+NP VAPPLV     
Sbjct: 73  LTFGSVHDASAAKTGGRIGGQSFRSSAPRPSSPRINNNNSRTNIYINPRVAPPLVGGYGY 132

Query: 465 XXXXXXXXXXXWSPFSFFXXXXXXXXXXXXGFDTIVLFMLLGAGAAVVRRFL-RSRNEDD 289
                      WSPFSFF            GFDT++LFM  GA AAVVR+FL  SRN DD
Sbjct: 133 GGGYGYGGGWGWSPFSFFAPGPSVAVGVGGGFDTLLLFMFFGAAAAVVRKFLGGSRNVDD 192

Query: 288 DDDY 277
           DDDY
Sbjct: 193 DDDY 196


Top