BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00001230
         (1140 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241288.1| uncharacterized protein LOC100794560 [Glycin...   332   8e-89
ref|XP_003536534.1| PREDICTED: LOW QUALITY PROTEIN: ribosome-rec...   323   4e-86
gb|AFK38022.1| unknown [Medicago truncatula]                          322   1e-85
ref|XP_003590639.1| Ribosome-recycling factor [Medicago truncatu...   322   1e-85
gb|ABK96574.1| unknown [Populus trichocarpa x Populus deltoides]      308   2e-81

>ref|NP_001241288.1| uncharacterized protein LOC100794560 [Glycine max]
           gi|255638439|gb|ACU19529.1| unknown [Glycine max]
          Length = 261

 Score =  332 bits (852), Expect = 8e-89
 Identities = 189/273 (69%), Positives = 209/273 (76%)
 Frame = +2

Query: 65  MATSFSPTTPVRSIFQPHPNPPKTLLSLPAHESSYSFKRSWTPAASYATLKLPRGLTLSG 244
           MATSFSPT  V SI     NPPK LL L   +     +RS+  +ASYATLKLPR   LS 
Sbjct: 1   MATSFSPTASVGSII--FQNPPKGLLLLSQQQQ----QRSFASSASYATLKLPRAFALS- 53

Query: 245 RSRPLLSKGLSRRRMGLVRXXXXXXXXXXXXXXXKDVKNRMERTIENVRSNFNSIRTGRA 424
             RPLLSKG    R  LVR               KD K RM+RTI+NVR+NF+SIRTGRA
Sbjct: 54  -PRPLLSKG----RTTLVRAATIEEIEAEKAAIEKDAKTRMDRTIDNVRTNFSSIRTGRA 108

Query: 425 NPAMLDKIEVEYYGSPVSLKTIAQISTPDASSLLVQPYDKSSLKDIEKAIVNSNLGMTPN 604
           NP+MLDKI+VEYYGSPVSLK+IAQISTPDASSLLVQPYDKSSLK IEKAIV+S+LGMTPN
Sbjct: 109 NPSMLDKIQVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKAIEKAIVSSDLGMTPN 168

Query: 605 NDGELIRLSVPQLTSERRKELSKVVAKQAEEGKVALRNIRRDXXXXXXXXXXXXXXSEDN 784
           NDGELIRLS+PQLTS+RRKELSK+VAKQAEEGKVALRNIRRD              SEDN
Sbjct: 169 NDGELIRLSIPQLTSDRRKELSKIVAKQAEEGKVALRNIRRDALKAYDKLEKEKKLSEDN 228

Query: 785 VKDLTSDLQKLTDDHIKKVDTIFKQKEKELLTV 883
           VKDL+SDLQKLTD+++KKVDTIFKQKEKELLTV
Sbjct: 229 VKDLSSDLQKLTDEYMKKVDTIFKQKEKELLTV 261


>ref|XP_003536534.1| PREDICTED: LOW QUALITY PROTEIN: ribosome-recycling factor,
           chloroplastic-like [Glycine max]
          Length = 256

 Score =  323 bits (829), Expect = 4e-86
 Identities = 184/272 (67%), Positives = 204/272 (75%)
 Frame = +2

Query: 68  ATSFSPTTPVRSIFQPHPNPPKTLLSLPAHESSYSFKRSWTPAASYATLKLPRGLTLSGR 247
           +TSFSPT  VRSI     NPPK LL L       S +RS+  +ASYATLKLPR       
Sbjct: 4   STSFSPTASVRSIIFQKQNPPKALLLL-------SQQRSFASSASYATLKLPR------- 49

Query: 248 SRPLLSKGLSRRRMGLVRXXXXXXXXXXXXXXXKDVKNRMERTIENVRSNFNSIRTGRAN 427
            RPLLS G    R  LVR               KD K+RM+RTI+NVR+NF+SIRTGRAN
Sbjct: 50  -RPLLSXG----RTPLVRAATIEEIEAEKAAIEKDAKSRMDRTIDNVRTNFSSIRTGRAN 104

Query: 428 PAMLDKIEVEYYGSPVSLKTIAQISTPDASSLLVQPYDKSSLKDIEKAIVNSNLGMTPNN 607
           PAMLDKIEVEYYGSPVSLK+IAQISTPDASSLLVQPYDKSSLK IEK IV+S+LGMTPNN
Sbjct: 105 PAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKAIEKTIVSSDLGMTPNN 164

Query: 608 DGELIRLSVPQLTSERRKELSKVVAKQAEEGKVALRNIRRDXXXXXXXXXXXXXXSEDNV 787
           DGE I+L +PQLTS+RRKELSK+VAKQAEEGKVALRNIRRD              SEDNV
Sbjct: 165 DGESIQLRIPQLTSDRRKELSKIVAKQAEEGKVALRNIRRDALKAYDKLEKEKKLSEDNV 224

Query: 788 KDLTSDLQKLTDDHIKKVDTIFKQKEKELLTV 883
           KDL+SDLQKLTD+++KKVDTIFKQKEKELLTV
Sbjct: 225 KDLSSDLQKLTDEYMKKVDTIFKQKEKELLTV 256


>gb|AFK38022.1| unknown [Medicago truncatula]
          Length = 262

 Score =  322 bits (825), Expect = 1e-85
 Identities = 185/275 (67%), Positives = 207/275 (75%), Gaps = 2/275 (0%)
 Frame = +2

Query: 65  MATSFSPTTPVRSIFQPHPNPPKTLLSLPAHESSYSFKRSWTPAASYATLKLPRGLTLSG 244
           MATSFS TTP+RSIFQ  P  PK LLS  AH SS++ KRS T    Y TLKL      SG
Sbjct: 1   MATSFSSTTPLRSIFQNLPVVPKALLS--AH-SSFTIKRSST----YVTLKL------SG 47

Query: 245 RSRPLLSKGLS--RRRMGLVRXXXXXXXXXXXXXXXKDVKNRMERTIENVRSNFNSIRTG 418
             R  LSKGL     R G VR                DVK+RMERT++NV++NF+SIRTG
Sbjct: 48  SGRHSLSKGLLTLHTRKGFVRAATIEEIEAEKASIENDVKSRMERTLDNVKTNFSSIRTG 107

Query: 419 RANPAMLDKIEVEYYGSPVSLKTIAQISTPDASSLLVQPYDKSSLKDIEKAIVNSNLGMT 598
           RA P+MLDKIEVEYYGSPVSLKTIAQISTPDASSLLV PYDKSSLK IEKAIVNS++GMT
Sbjct: 108 RATPSMLDKIEVEYYGSPVSLKTIAQISTPDASSLLVSPYDKSSLKAIEKAIVNSDVGMT 167

Query: 599 PNNDGELIRLSVPQLTSERRKELSKVVAKQAEEGKVALRNIRRDXXXXXXXXXXXXXXSE 778
           PNNDGE+IRLS+PQLTS+RRKEL+K+V+KQ EEGKVALRNIRRD              SE
Sbjct: 168 PNNDGEVIRLSIPQLTSDRRKELTKIVSKQVEEGKVALRNIRRDALKAYEKLEKDKKLSE 227

Query: 779 DNVKDLTSDLQKLTDDHIKKVDTIFKQKEKELLTV 883
           DNVKDL+SDLQKLTDD+IKKVD ++KQKEKELLTV
Sbjct: 228 DNVKDLSSDLQKLTDDYIKKVDALYKQKEKELLTV 262


>ref|XP_003590639.1| Ribosome-recycling factor [Medicago truncatula]
           gi|217072182|gb|ACJ84451.1| unknown [Medicago
           truncatula] gi|217072782|gb|ACJ84751.1| unknown
           [Medicago truncatula] gi|355479687|gb|AES60890.1|
           Ribosome-recycling factor [Medicago truncatula]
          Length = 262

 Score =  322 bits (825), Expect = 1e-85
 Identities = 185/275 (67%), Positives = 207/275 (75%), Gaps = 2/275 (0%)
 Frame = +2

Query: 65  MATSFSPTTPVRSIFQPHPNPPKTLLSLPAHESSYSFKRSWTPAASYATLKLPRGLTLSG 244
           MATSFS TTP+RSIFQ  P  PK LLS  AH SS++ KRS T    Y TLKL      SG
Sbjct: 1   MATSFSSTTPLRSIFQNLPIVPKALLS--AH-SSFTIKRSST----YVTLKL------SG 47

Query: 245 RSRPLLSKGLS--RRRMGLVRXXXXXXXXXXXXXXXKDVKNRMERTIENVRSNFNSIRTG 418
             R  LSKGL     R G VR                DVK+RMERT++NV++NF+SIRTG
Sbjct: 48  SGRHSLSKGLLTLHTRKGFVRAATIEEIEAEKASIENDVKSRMERTLDNVKTNFSSIRTG 107

Query: 419 RANPAMLDKIEVEYYGSPVSLKTIAQISTPDASSLLVQPYDKSSLKDIEKAIVNSNLGMT 598
           RA P+MLDKIEVEYYGSPVSLKTIAQISTPDASSLLV PYDKSSLK IEKAIVNS++GMT
Sbjct: 108 RATPSMLDKIEVEYYGSPVSLKTIAQISTPDASSLLVSPYDKSSLKAIEKAIVNSDVGMT 167

Query: 599 PNNDGELIRLSVPQLTSERRKELSKVVAKQAEEGKVALRNIRRDXXXXXXXXXXXXXXSE 778
           PNNDGE+IRLS+PQLTS+RRKEL+K+V+KQ EEGKVALRNIRRD              SE
Sbjct: 168 PNNDGEVIRLSIPQLTSDRRKELTKIVSKQVEEGKVALRNIRRDALKAYEKLEKDKKLSE 227

Query: 779 DNVKDLTSDLQKLTDDHIKKVDTIFKQKEKELLTV 883
           DNVKDL+SDLQKLTDD+IKKVD ++KQKEKELLTV
Sbjct: 228 DNVKDLSSDLQKLTDDYIKKVDALYKQKEKELLTV 262


>gb|ABK96574.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 286

 Score =  308 bits (789), Expect = 2e-81
 Identities = 175/289 (60%), Positives = 209/289 (72%), Gaps = 16/289 (5%)
 Frame = +2

Query: 65  MATSFS-PTTP--VRSIFQPHPNPPKTLLSLPA------HESSYSFKRS-------WTPA 196
           MA  FS PTTP  +RSIFQP+PNPPK LLSL        H +   +          W+ +
Sbjct: 1   MAAPFSSPTTPPPLRSIFQPNPNPPKALLSLTGSFHRGPHRAKVGYNSIGAASVSLWSSS 60

Query: 197 ASYATLKLPRGLTLSGRSRPLLSKGLSRRRMGLVRXXXXXXXXXXXXXXXKDVKNRMERT 376
           A+Y++L+      LSG+  P+  K L + R G+VR                D K RME+T
Sbjct: 61  ANYSSLRNGSS-KLSGK--PVAVKRLLQNRRGVVRNATIEEIEAEKSLIEDDAKGRMEKT 117

Query: 377 IENVRSNFNSIRTGRANPAMLDKIEVEYYGSPVSLKTIAQISTPDASSLLVQPYDKSSLK 556
           I+ +R+NFNS+RTGRANP+MLDKIEVEYYG+PVSLK+IAQISTPDASSLLVQPYDKSSLK
Sbjct: 118 IDTMRTNFNSVRTGRANPSMLDKIEVEYYGTPVSLKSIAQISTPDASSLLVQPYDKSSLK 177

Query: 557 DIEKAIVNSNLGMTPNNDGELIRLSVPQLTSERRKELSKVVAKQAEEGKVALRNIRRDXX 736
            IEKAIV+S+LG+TPNNDGE+IR+S+PQLTSERRKELSK+VAK AEEGKVALRNIRRD  
Sbjct: 178 AIEKAIVSSDLGLTPNNDGEVIRMSIPQLTSERRKELSKMVAKLAEEGKVALRNIRRDAL 237

Query: 737 XXXXXXXXXXXXSEDNVKDLTSDLQKLTDDHIKKVDTIFKQKEKELLTV 883
                       SEDNVKDL+SDLQKLTD+++KK+D IFKQKEKELL V
Sbjct: 238 KAYEKLEKEKKLSEDNVKDLSSDLQKLTDEYMKKLDNIFKQKEKELLKV 286