BLASTX nr result

ID: Glycyrrhiza24_contig00001211 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00001211
         (1890 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543573.1| PREDICTED: protein SHORT-ROOT-like [Glycine ...   609   e-172
ref|XP_003546837.1| PREDICTED: protein SHORT-ROOT-like [Glycine ...   606   e-171
ref|XP_002327997.1| GRAS family transcription factor [Populus tr...   593   e-167
ref|XP_002309782.1| GRAS family transcription factor [Populus tr...   591   e-166
emb|CAN61051.1| hypothetical protein VITISV_023622 [Vitis vinifera]   588   e-165

>ref|XP_003543573.1| PREDICTED: protein SHORT-ROOT-like [Glycine max]
          Length = 443

 Score =  609 bits (1570), Expect = e-172
 Identities = 310/384 (80%), Positives = 329/384 (85%), Gaps = 2/384 (0%)
 Frame = +2

Query: 332  KWSSKLLRECARAISERDSNKIHHLLWMLNELASPYGDTDQKLASYFLQALFCKATESGH 511
            KW+ KLLRECA+AISERDS K HHLLWMLNELASPYGD DQKLASYFLQALFC+ATESG 
Sbjct: 64   KWAPKLLRECAKAISERDSTKTHHLLWMLNELASPYGDCDQKLASYFLQALFCRATESGE 123

Query: 512  KCYNTLSSVSEKNHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALEGETKLHIIDIS 691
            +CY TLSSV+EKNHSFDSAR+LILKFQEVSPWTTFGHVASNGA+LEALEGE KLHIID+S
Sbjct: 124  RCYKTLSSVAEKNHSFDSARRLILKFQEVSPWTTFGHVASNGALLEALEGEPKLHIIDLS 183

Query: 692  NTLCTQWPTLLEALATRNDETPHLKLTVVSIVGSVMKEVGQRMEKFARLMGVPFELNVIS 871
            +TLCTQWPTLLEALATRNDETPHLKLTVV+I GSVMKEVGQRMEKFARLMGVPFE NVIS
Sbjct: 184  STLCTQWPTLLEALATRNDETPHLKLTVVAIAGSVMKEVGQRMEKFARLMGVPFEFNVIS 243

Query: 872  GLSHLGELTKELLGVQEGEAIAVNCVGALRRVQVEEREGVIRMFKSLSPKVVTVVEEEAD 1051
            GLS   ++TKE LGVQE EAIAVNCVGALRRVQVEERE +IR+FKSL PKVVTVVEEEAD
Sbjct: 244  GLS---QITKEGLGVQEDEAIAVNCVGALRRVQVEERENLIRVFKSLGPKVVTVVEEEAD 300

Query: 1052 FVSSGDDFVKCFEECLRFYTLYFEMLEESFPMTSNERLMLERECSRSIVRVLAC--NXXX 1225
            F SS  DF KCFEECL+FYTLYFEML+ESFP TSNERLMLERECSRSIVRVLAC      
Sbjct: 301  FCSSRGDFFKCFEECLKFYTLYFEMLKESFPPTSNERLMLERECSRSIVRVLACCGTGHE 360

Query: 1226 XXXXXXXXXNCERRERGTQWCERFIRNEFSAGGFSXXXXXXXKALLKRYQAGWSLVVPQT 1405
                      CERRERG QWCER +RN FS  GFS       KALLKRYQ+GWSLVV Q 
Sbjct: 361  FEDDHGEFDCCERRERGIQWCER-LRNAFSPSGFSDDVVDDVKALLKRYQSGWSLVVTQG 419

Query: 1406 QGDAAGIYLTWKEEPVVWASAWKP 1477
                +GIYLTWKEEPVVWASAWKP
Sbjct: 420  DEHISGIYLTWKEEPVVWASAWKP 443


>ref|XP_003546837.1| PREDICTED: protein SHORT-ROOT-like [Glycine max]
          Length = 437

 Score =  606 bits (1563), Expect = e-171
 Identities = 305/382 (79%), Positives = 328/382 (85%)
 Frame = +2

Query: 332  KWSSKLLRECARAISERDSNKIHHLLWMLNELASPYGDTDQKLASYFLQALFCKATESGH 511
            KW+ KLLRECA+AISERDS+K HH LWMLNELASPYGD DQKLASYFLQALFC+ATESG 
Sbjct: 60   KWAPKLLRECAKAISERDSSKTHHHLWMLNELASPYGDCDQKLASYFLQALFCRATESGE 119

Query: 512  KCYNTLSSVSEKNHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALEGETKLHIIDIS 691
            +CY TLSSV+EKNHSFDSA +LILKFQEVSPWTTFGHVASNGAILEALEGE KLHIID+S
Sbjct: 120  RCYKTLSSVAEKNHSFDSAMRLILKFQEVSPWTTFGHVASNGAILEALEGEPKLHIIDLS 179

Query: 692  NTLCTQWPTLLEALATRNDETPHLKLTVVSIVGSVMKEVGQRMEKFARLMGVPFELNVIS 871
            NTLCTQWPTLLEALATRNDETPHLKLTVV+I GSVMKE+GQRMEKFARLMGVPFE NVIS
Sbjct: 180  NTLCTQWPTLLEALATRNDETPHLKLTVVAIAGSVMKEIGQRMEKFARLMGVPFEFNVIS 239

Query: 872  GLSHLGELTKELLGVQEGEAIAVNCVGALRRVQVEEREGVIRMFKSLSPKVVTVVEEEAD 1051
            GLS   ++TKE LGVQE EAIAVNCVG LRRV++EERE +IR+FKSL PKVVTVVEEEAD
Sbjct: 240  GLS---QITKEGLGVQEDEAIAVNCVGTLRRVEIEERENLIRVFKSLGPKVVTVVEEEAD 296

Query: 1052 FVSSGDDFVKCFEECLRFYTLYFEMLEESFPMTSNERLMLERECSRSIVRVLACNXXXXX 1231
            F SS ++FVKCFEECL+FYTLYFEMLEESFP TSNERLMLERECSR+IVRVLAC      
Sbjct: 297  FCSSRENFVKCFEECLKFYTLYFEMLEESFPPTSNERLMLERECSRTIVRVLACCGSGEF 356

Query: 1232 XXXXXXXNCERRERGTQWCERFIRNEFSAGGFSXXXXXXXKALLKRYQAGWSLVVPQTQG 1411
                    CERRERG QWCER +R+ FS  GFS       KALLKRYQ GWSLVV Q   
Sbjct: 357  EDDGEFDCCERRERGIQWCER-LRSAFSPSGFSDDVVDDVKALLKRYQPGWSLVVSQGDE 415

Query: 1412 DAAGIYLTWKEEPVVWASAWKP 1477
              +GIYLTWKEEPVVWASAWKP
Sbjct: 416  HLSGIYLTWKEEPVVWASAWKP 437


>ref|XP_002327997.1| GRAS family transcription factor [Populus trichocarpa]
            gi|222837406|gb|EEE75785.1| GRAS family transcription
            factor [Populus trichocarpa]
          Length = 411

 Score =  593 bits (1528), Expect = e-167
 Identities = 302/390 (77%), Positives = 335/390 (85%), Gaps = 4/390 (1%)
 Frame = +2

Query: 320  GTNTKWSSKLLRECARAISERDSNKIHHLLWMLNELASPYGDTDQKLASYFLQALFCKAT 499
            G   KW+SKLL ECARAISE+DS+KIHHLLWMLNELASPYGD DQKLASYFLQALFCKAT
Sbjct: 31   GGGNKWASKLLSECARAISEKDSSKIHHLLWMLNELASPYGDCDQKLASYFLQALFCKAT 90

Query: 500  ESGHKCYNTLSSVSEKNHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALEGETKLHI 679
            ESG +C+ TL++V+EK+HSFDSARKLILKFQEVSPWTTFGHVASNGAILEAL+GE+KLHI
Sbjct: 91   ESGQRCFKTLTTVAEKSHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALDGESKLHI 150

Query: 680  IDISNTLCTQWPTLLEALATRNDETPHLKLTVV---SIVGSVMKEVGQRMEKFARLMGVP 850
            IDISNTLCTQWPTLLEALATRNDETP LKLTVV   SIV SVMKE+GQRMEKFARLMGVP
Sbjct: 151  IDISNTLCTQWPTLLEALATRNDETPRLKLTVVVTASIVRSVMKEIGQRMEKFARLMGVP 210

Query: 851  FELNVISGLSHLGELTKELLGVQEGEAIAVNCVGALRRVQVEEREGVIRMFKSLSPKVVT 1030
            FE  VIS L+H+GELTKE LGVQE EA+A+NC+GALRRV+V+ER  VI++F+SL+P+VVT
Sbjct: 211  FEFKVISVLNHIGELTKEGLGVQEDEAVAINCIGALRRVEVDERSSVIQLFRSLNPRVVT 270

Query: 1031 VVEEEADFVSSGDDFVKCFEECLRFYTLYFEMLEESFPMTSNERLMLERECSRSIVRVLA 1210
            +VEEEADF SS  DFVKCFEECLR+YTLYFEMLEESF  TSNERLMLERECSR+IVRVLA
Sbjct: 271  IVEEEADFTSSRYDFVKCFEECLRYYTLYFEMLEESFVPTSNERLMLERECSRNIVRVLA 330

Query: 1211 CNXXXXXXXXXXXXNCERRERGTQWCERFIRNEFSAGGFSXXXXXXXKALLKRYQAGWSL 1390
            C+             CERRERG QW ER +R  FS  GFS       KALLKRY+AGW+L
Sbjct: 331  CD------EETGGGECERRERGVQWSER-LREAFSPVGFSDDVVDDVKALLKRYKAGWAL 383

Query: 1391 VVPQTQGD-AAGIYLTWKEEPVVWASAWKP 1477
            V+P  QGD  +GIYLTWKEEPVVWASAWKP
Sbjct: 384  VLP--QGDHESGIYLTWKEEPVVWASAWKP 411


>ref|XP_002309782.1| GRAS family transcription factor [Populus trichocarpa]
            gi|222852685|gb|EEE90232.1| GRAS family transcription
            factor [Populus trichocarpa]
          Length = 411

 Score =  591 bits (1524), Expect = e-166
 Identities = 300/389 (77%), Positives = 336/389 (86%), Gaps = 3/389 (0%)
 Frame = +2

Query: 320  GTNTKWSSKLLRECARAISERDSNKIHHLLWMLNELASPYGDTDQKLASYFLQALFCKAT 499
            G   KW+S+LL ECARAISE+DS+KIH+LLWMLNELASPYGD +QKLAS+FLQALFCKAT
Sbjct: 31   GAGNKWASRLLSECARAISEKDSSKIHNLLWMLNELASPYGDCEQKLASHFLQALFCKAT 90

Query: 500  ESGHKCYNTLSSVSEKNHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALEGETKLHI 679
            +SG +C+ TL++V+EK+HSFDSARKLILKFQEVSPWTTFGHVASNGAILEAL+G +KLHI
Sbjct: 91   DSGQRCFKTLTTVAEKSHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALDGASKLHI 150

Query: 680  IDISNTLCTQWPTLLEALATRNDETPHLKLTVV---SIVGSVMKEVGQRMEKFARLMGVP 850
            IDIS+TLCTQWPTLLEALATRNDETPHLKLTVV   SIV SVMKE+GQRMEKFARLMGVP
Sbjct: 151  IDISHTLCTQWPTLLEALATRNDETPHLKLTVVVTASIVRSVMKEIGQRMEKFARLMGVP 210

Query: 851  FELNVISGLSHLGELTKELLGVQEGEAIAVNCVGALRRVQVEEREGVIRMFKSLSPKVVT 1030
            FELNVISGL+HLGELTK+ LGVQE EA+A+NC GALRRV VEER  VI+MF+SL+P+VVT
Sbjct: 211  FELNVISGLNHLGELTKDRLGVQEDEAVAINCNGALRRVGVEERNSVIQMFQSLNPRVVT 270

Query: 1031 VVEEEADFVSSGDDFVKCFEECLRFYTLYFEMLEESFPMTSNERLMLERECSRSIVRVLA 1210
            +VEEEADF SS  DFVKCFEECLR+YTLYFEMLEESF  TSNERLMLERECSR+IVRVLA
Sbjct: 271  IVEEEADFTSSRYDFVKCFEECLRYYTLYFEMLEESFVPTSNERLMLERECSRNIVRVLA 330

Query: 1211 CNXXXXXXXXXXXXNCERRERGTQWCERFIRNEFSAGGFSXXXXXXXKALLKRYQAGWSL 1390
            C+             CERRERG+QW ER +R  FS  GFS       KALLKRY+AGW+L
Sbjct: 331  CD------EGNDGGECERRERGSQWFER-LREAFSPVGFSDDVVDDVKALLKRYRAGWAL 383

Query: 1391 VVPQTQGDAAGIYLTWKEEPVVWASAWKP 1477
            V+PQ   D +GIYLTWKEEPVVWASAWKP
Sbjct: 384  VLPQGDHD-SGIYLTWKEEPVVWASAWKP 411


>emb|CAN61051.1| hypothetical protein VITISV_023622 [Vitis vinifera]
          Length = 436

 Score =  588 bits (1516), Expect = e-165
 Identities = 299/386 (77%), Positives = 331/386 (85%), Gaps = 4/386 (1%)
 Frame = +2

Query: 332  KWSSKLLRECARAISERDSNKIHHLLWMLNELASPYGDTDQKLASYFLQALFCKATESGH 511
            KW+S LL+ECARAIS++DS++IHHLLWMLNELASPYGD DQKLASYFLQALFCKATESGH
Sbjct: 56   KWASSLLKECARAISDKDSSRIHHLLWMLNELASPYGDCDQKLASYFLQALFCKATESGH 115

Query: 512  KCYNTLSSVSEKNHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALEGETKLHIIDIS 691
            +CY TLSSV+EK+HSFDSARKLILKFQEVSPWTTFGHVASNGAILEALEGETKLHIIDIS
Sbjct: 116  RCYKTLSSVAEKSHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALEGETKLHIIDIS 175

Query: 692  NTLCTQWPTLLEALATRNDETPHLKLTVV---SIVGSVMKEVGQRMEKFARLMGVPFELN 862
            NTLCTQWPTLLEALATRNDETP LKLTVV   S+V SVMKE+GQRMEKFARLMGVPFE  
Sbjct: 176  NTLCTQWPTLLEALATRNDETPRLKLTVVVTASLVRSVMKEIGQRMEKFARLMGVPFEFQ 235

Query: 863  VISGLSHLGELTKELLGVQEGEAIAVNCVGALRRVQVEEREGVIRMFKSLSPKVVTVVEE 1042
            VISG++HLGELTKE LGV++ EA+AVNC+GALRRV+VEER  VI+  +SL P+VVTVVEE
Sbjct: 236  VISGVNHLGELTKEGLGVRDDEAVAVNCIGALRRVEVEERRRVIQTLQSLGPRVVTVVEE 295

Query: 1043 EADFVSSGDDFVKCFEECLRFYTLYFEMLEESFPMTSNERLMLERECSRSIVRVLACNXX 1222
            EADF SS +DFVKCFEECLRFYTLYFEMLEESF  TSNERLMLERECSRSIVRVLAC+  
Sbjct: 296  EADFSSSRNDFVKCFEECLRFYTLYFEMLEESFVPTSNERLMLERECSRSIVRVLACD-- 353

Query: 1223 XXXXXXXXXXNCERRERGTQWCERFIRNEFSAGGFSXXXXXXXKALLKRYQAGWSLVVPQ 1402
                      +CERRE+G QW E  ++  FS  GFS       KALLKRY++GW+LV PQ
Sbjct: 354  --DIEDDTGEDCERREKGIQWSEG-LKEXFSPLGFSEDVVDDVKALLKRYRSGWALVPPQ 410

Query: 1403 T-QGDAAGIYLTWKEEPVVWASAWKP 1477
              +    GIYLTWK+EPVVWASAWKP
Sbjct: 411  QGENHQLGIYLTWKDEPVVWASAWKP 436


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