BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00001106
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533266.1| PREDICTED: pentatricopeptide repeat-containi...   140   1e-31
ref|XP_003619716.1| Pentatricopeptide repeat-containing protein ...   111   5e-23
ref|XP_002512332.1| pentatricopeptide repeat-containing protein,...    96   3e-18
ref|XP_002272959.2| PREDICTED: uncharacterized protein LOC100251...    95   5e-18
emb|CBI25450.3| unnamed protein product [Vitis vinifera]               95   5e-18

>ref|XP_003533266.1| PREDICTED: pentatricopeptide repeat-containing protein At2g40240,
           mitochondrial-like [Glycine max]
          Length = 332

 Score =  140 bits (352), Expect = 1e-31
 Identities = 74/126 (58%), Positives = 90/126 (71%)
 Frame = +2

Query: 2   SFLRKSPXXXXXXXXXXXXXFATLTTAKPFPDDPTSAYYDELAAASFVSGNHESLRDLLN 181
           SFLRKSP             FAT   AKPFPDDPT+AYYD+LA A+  SG+  +LRD+LN
Sbjct: 2   SFLRKSPNKTLTTLRR----FATTLAAKPFPDDPTAAYYDQLAFAAGDSGDFHALRDVLN 57

Query: 182 KRVQDRCYNTKRTFKFITHKNLSPSLVDDVVKTLSTLNPGFTRRNAFDSLVTRLCSLKRP 361
           KR+QD   NTK TF F+   N SPS++D++V+TLS LN G TRR+A DSLVTRLC L+R 
Sbjct: 58  KRIQDGFLNTKITFNFLKDTNFSPSVIDNLVQTLSHLNQGATRRSALDSLVTRLCKLRRA 117

Query: 362 DDALRV 379
           D+ALRV
Sbjct: 118 DEALRV 123


>ref|XP_003619716.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355494731|gb|AES75934.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 333

 Score =  111 bits (278), Expect = 5e-23
 Identities = 64/126 (50%), Positives = 78/126 (61%)
 Frame = +2

Query: 2   SFLRKSPXXXXXXXXXXXXXFATLTTAKPFPDDPTSAYYDELAAASFVSGNHESLRDLLN 181
           SFLRK               F+ LT   P P   TS  YD LAA    SG+  SL  +LN
Sbjct: 2   SFLRKHLNNISHSPLSTLRRFSNLT---PPPTSATS--YDTLAANFATSGDFTSLHSILN 56

Query: 182 KRVQDRCYNTKRTFKFITHKNLSPSLVDDVVKTLSTLNPGFTRRNAFDSLVTRLCSLKRP 361
           KR+Q   +NTK TF FIT+ N +PSL+ +++ TLS LNPGFTRRNAFDSL+TRLC L+  
Sbjct: 57  KRIQHGFFNTKHTFNFITNSNFTPSLLQNLITTLSRLNPGFTRRNAFDSLITRLCKLRLI 116

Query: 362 DDALRV 379
           +DAL V
Sbjct: 117 EDALTV 122


>ref|XP_002512332.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548293|gb|EEF49784.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 619

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 45/97 (46%), Positives = 68/97 (70%)
 Frame = +2

Query: 89  FPDDPTSAYYDELAAASFVSGNHESLRDLLNKRVQDRCYNTKRTFKFITHKNLSPSLVDD 268
           FPD PT+AYYD L  A+    + ++L  LLNKRV+D C+NT  TFKFIT+ + S S++DD
Sbjct: 321 FPDKPTAAYYDGLVNAAGHERDFKTLHHLLNKRVRDHCFNTTNTFKFITNTDNSLSVLDD 380

Query: 269 VVKTLSTLNPGFTRRNAFDSLVTRLCSLKRPDDALRV 379
           +++TL+ L+ G  R +A++ L+ RLC L R  ++L +
Sbjct: 381 LIQTLARLDKGIPRMSAYNMLIARLCKLDRIQESLHI 417


>ref|XP_002272959.2| PREDICTED: uncharacterized protein LOC100251820 [Vitis vinifera]
          Length = 613

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 46/101 (45%), Positives = 70/101 (69%)
 Frame = +2

Query: 77  TAKPFPDDPTSAYYDELAAASFVSGNHESLRDLLNKRVQDRCYNTKRTFKFITHKNLSPS 256
           T  P P +PT AYYD L   +  + +  S+ +LLNKRV+D C+NT  TF FIT+ +   S
Sbjct: 27  TQNPNPYEPTVAYYDNLINTAGRNRDFASVCNLLNKRVRDGCFNTNHTFDFITNTDAGLS 86

Query: 257 LVDDVVKTLSTLNPGFTRRNAFDSLVTRLCSLKRPDDALRV 379
           ++D++ + L+ L+ GF R++A+DSL+ RLC LKR D++LR+
Sbjct: 87  VLDELSQALAHLDKGFLRKSAYDSLIARLCRLKRVDESLRL 127


>emb|CBI25450.3| unnamed protein product [Vitis vinifera]
          Length = 527

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 46/101 (45%), Positives = 70/101 (69%)
 Frame = +2

Query: 77  TAKPFPDDPTSAYYDELAAASFVSGNHESLRDLLNKRVQDRCYNTKRTFKFITHKNLSPS 256
           T  P P +PT AYYD L   +  + +  S+ +LLNKRV+D C+NT  TF FIT+ +   S
Sbjct: 27  TQNPNPYEPTVAYYDNLINTAGRNRDFASVCNLLNKRVRDGCFNTNHTFDFITNTDAGLS 86

Query: 257 LVDDVVKTLSTLNPGFTRRNAFDSLVTRLCSLKRPDDALRV 379
           ++D++ + L+ L+ GF R++A+DSL+ RLC LKR D++LR+
Sbjct: 87  VLDELSQALAHLDKGFLRKSAYDSLIARLCRLKRVDESLRL 127