BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00001085
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241242.1| uncharacterized protein LOC100812728 [Glycin...   132   4e-29
ref|XP_003538171.1| PREDICTED: double-stranded RNA-binding prote...   131   6e-29
ref|XP_003541993.1| PREDICTED: double-stranded RNA-binding prote...   119   2e-25
ref|XP_003540172.1| PREDICTED: double-stranded RNA-binding prote...   114   8e-24
gb|AFK41322.1| unknown [Lotus japonicus]                              113   1e-23

>ref|NP_001241242.1| uncharacterized protein LOC100812728 [Glycine max]
           gi|255644888|gb|ACU22944.1| unknown [Glycine max]
          Length = 401

 Score =  132 bits (331), Expect = 4e-29
 Identities = 74/114 (64%), Positives = 78/114 (68%), Gaps = 4/114 (3%)
 Frame = +3

Query: 3   TSKILPLICQKTASRSRH--PATAAAGSSDKSVMPPRSSAPEIRVTHHPKFPAAGAAPYV 176
           TSKILPLICQK A RSRH   A+ A  S D S MP  S+ PE R    PKFPAAGAAPYV
Sbjct: 223 TSKILPLICQKAAPRSRHLVGASPARASCDNSAMPQLSATPESRGIRRPKFPAAGAAPYV 282

Query: 177 PIRQMRPPCQGIAPPVTIRTAIPVFSPPP--ATVSHQAMXXXXXXXXXXXNIRQ 332
           PIRQMR PCQG+APPVTIRTAIPVFSPPP  A VSHQ +            IRQ
Sbjct: 283 PIRQMR-PCQGMAPPVTIRTAIPVFSPPPAAAAVSHQVLRAPHVRVAPPVTIRQ 335


>ref|XP_003538171.1| PREDICTED: double-stranded RNA-binding protein 2-like [Glycine max]
          Length = 411

 Score =  131 bits (329), Expect = 6e-29
 Identities = 74/116 (63%), Positives = 79/116 (68%), Gaps = 6/116 (5%)
 Frame = +3

Query: 3   TSKILPLICQKTASRSRH--PATAAAGSSDKSVMPPRSSAPEIRVTHHPKFPAAGAAPYV 176
           TSKILPLICQK A RSRH   A+ A  SSD SVMP   + P+ R    PKFPAAGAAPYV
Sbjct: 223 TSKILPLICQKGAHRSRHLVAASPAPASSDNSVMPQLPATPDSRGIRRPKFPAAGAAPYV 282

Query: 177 PIRQMRPPCQGIAPPVTIRTAIPVFSPPP----ATVSHQAMXXXXXXXXXXXNIRQ 332
           PIRQMR PCQG+APPVTIRTAIPVFSPPP    A VSHQ +            IRQ
Sbjct: 283 PIRQMR-PCQGMAPPVTIRTAIPVFSPPPPPAAAAVSHQVLRAPHVRVAPPVTIRQ 337


>ref|XP_003541993.1| PREDICTED: double-stranded RNA-binding protein 2-like [Glycine max]
          Length = 393

 Score =  119 bits (299), Expect = 2e-25
 Identities = 66/125 (52%), Positives = 75/125 (60%), Gaps = 15/125 (12%)
 Frame = +3

Query: 3   TSKILPLICQKTASRS---------------RHPATAAAGSSDKSVMPPRSSAPEIRVTH 137
           +SKILPLICQKTA RS               RHP  A A +SD S +P +S + E R T 
Sbjct: 223 SSKILPLICQKTAPRSKPSLATTTTNESPGSRHPQAAVAVTSDNSNLPQQSCSLECRATR 282

Query: 138 HPKFPAAGAAPYVPIRQMRPPCQGIAPPVTIRTAIPVFSPPPATVSHQAMXXXXXXXXXX 317
             KFPAAGAAPYVPIRQMRP CQ IAPPVTIRT +P F+ PPA+V H  +          
Sbjct: 283 PLKFPAAGAAPYVPIRQMRPSCQRIAPPVTIRTVVPAFAAPPASVPHPVIRAPPVRVAPP 342

Query: 318 XNIRQ 332
             IRQ
Sbjct: 343 VTIRQ 347


>ref|XP_003540172.1| PREDICTED: double-stranded RNA-binding protein 2-like [Glycine max]
          Length = 411

 Score =  114 bits (285), Expect = 8e-24
 Identities = 68/128 (53%), Positives = 77/128 (60%), Gaps = 18/128 (14%)
 Frame = +3

Query: 3   TSKILPLICQKTASRS--------------RHPATAAAGSSDKSVMPPRSSAPEIRVTHH 140
           +SKILPLICQKTA RS              RHP   AA +SD S +PP+S + E R T  
Sbjct: 223 SSKILPLICQKTAPRSKPSLATTANESPRSRHPQ--AAMTSDNSTLPPQSCSLESRATRP 280

Query: 141 PKFPAAGAAPYVPIRQMRPPCQGIAPPVTIRTAIPVFS----PPPATVSHQAMXXXXXXX 308
            KF AAGAAPYVPIRQMRP CQ IAPPVTIRT +P F+    PPPA+V H A+       
Sbjct: 281 LKFRAAGAAPYVPIRQMRPSCQRIAPPVTIRTVVPAFATPPCPPPASVPHPAIRAPPVRV 340

Query: 309 XXXXNIRQ 332
                IRQ
Sbjct: 341 APPVTIRQ 348


>gb|AFK41322.1| unknown [Lotus japonicus]
          Length = 285

 Score =  113 bits (283), Expect = 1e-23
 Identities = 71/138 (51%), Positives = 80/138 (57%), Gaps = 28/138 (20%)
 Frame = +3

Query: 3   TSKILPLICQKTASRSRHP--------------ATA----------AAGSSDKSVMPPRS 110
           TSKILPLICQK A RSR                ATA          AA +SD+S +PP+S
Sbjct: 33  TSKILPLICQKAAPRSRPSLVTANDSVRSKPSFATANDNPRSKYPPAAATSDRSGVPPQS 92

Query: 111 SAPEIRVTHHPKFPAAGAAPYVPIRQMRPPCQGIAPPVTIRTAIPVFS----PPPATVSH 278
           SA E RV    KFPAAGAAPYVP+RQMR PC G+APPVT+R  +PVFS    PPP TV H
Sbjct: 93  SALESRVFRPLKFPAAGAAPYVPLRQMRSPCHGVAPPVTVRNMVPVFSAPPLPPPPTV-H 151

Query: 279 QAMXXXXXXXXXXXNIRQ 332
           Q +           NIRQ
Sbjct: 152 QVIRAPPVRVAPPVNIRQ 169