BLASTX nr result

ID: Glycyrrhiza24_contig00001005 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00001005
         (1164 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001235884.1| histone deacetylase HDT1 [Glycine max] gi|73...   326   6e-87
ref|XP_003538145.1| PREDICTED: histone deacetylase HDT1-like [Gl...   323   5e-86
gb|AFK35675.1| unknown [Lotus japonicus]                              314   3e-83
ref|NP_001241996.1| uncharacterized protein LOC100792094 [Glycin...   295   1e-77
ref|NP_001242333.1| uncharacterized protein LOC100795506 [Glycin...   295   1e-77

>ref|NP_001235884.1| histone deacetylase HDT1 [Glycine max]
            gi|73919939|sp|Q8LJS2.1|HDT1_SOYBN RecName: Full=Histone
            deacetylase HDT1; AltName: Full=Histone deacetylase 2a;
            Short=HD2a; AltName: Full=Nucleolar histone deacetylase
            HD2-p39 gi|22597156|gb|AAN03465.1| nucleolar histone
            deacetylase HD2-P39 [Glycine max]
          Length = 295

 Score =  326 bits (836), Expect = 6e-87
 Identities = 181/299 (60%), Positives = 201/299 (67%), Gaps = 10/299 (3%)
 Frame = -2

Query: 1079 MEFWGVEVKVAQTVKVDPADPIDGYIHVSQVALGEAKKDKASEPVVLYLKVDGQKLVLGT 900
            MEFWGVEVKV QTV VDP DP+D YIH+SQVALGEAKKDK +EPVVLYLKV  QK+VLGT
Sbjct: 1    MEFWGVEVKVGQTVTVDPMDPVDSYIHISQVALGEAKKDKPNEPVVLYLKVGEQKIVLGT 60

Query: 899  LSRDDFPHLSLDIVLDKESELSHNSKTASVYFCGYKVI---HXXXXXXXXXXXXXDLALM 729
            LSRD  PHLSLD+VLD +SELSH SK+ASV+FCGYKV+                 +LAL 
Sbjct: 61   LSRDGIPHLSLDLVLDSDSELSHTSKSASVFFCGYKVLTGNDNASDFSDSSEEDEELALE 120

Query: 728  DQENGKPETKAEVAKVSKSGK--PVTGASAKQVKIVDPKK-----XXXXXXXXXXXXXXX 570
             Q+NGKPE KAE AKV+K  K  P  GA A   K  DPKK                    
Sbjct: 121  GQDNGKPELKAEGAKVTKPSKSIPKIGAPA---KAADPKKDEDDDSDDESDDDLAGEDES 177

Query: 569  XXXXXXXXXXXXXXXXXXXXXETPAKKVNQGKKRPNESASKTPVPTKKAKNATPEKTDGK 390
                                 ETPAKKV+QGKKRPNESA+KTP+  KKAK ATPEKTDGK
Sbjct: 178  GSSDEMDDDSNSEEESDGDDEETPAKKVDQGKKRPNESAAKTPISAKKAKTATPEKTDGK 237

Query: 389  KGVHTATPHPMKKGGKTPNSVAKDKTPNSGGQLSCQSCNKSFTSESGFQQHKQAKHGGK 213
            K VH ATPHP KKGGKTPNS  K +TPNS GQLSC SC KSFT+E+G QQHK+AKHGG+
Sbjct: 238  KSVHVATPHPSKKGGKTPNS-TKGQTPNSAGQLSCASCKKSFTNEAGLQQHKKAKHGGQ 295


>ref|XP_003538145.1| PREDICTED: histone deacetylase HDT1-like [Glycine max]
          Length = 295

 Score =  323 bits (828), Expect = 5e-86
 Identities = 177/297 (59%), Positives = 201/297 (67%), Gaps = 4/297 (1%)
 Frame = -2

Query: 1091 MEAPMEFWGVEVKVAQTVKVDPADPIDGYIHVSQVALGEAKKDKASEPVVLYLKVDGQKL 912
            M+APMEFWGVEVKV QTV VDP DP+D YIH+SQVALGEAKK+K +E VVLYLKV  QK+
Sbjct: 1    MDAPMEFWGVEVKVGQTVTVDPMDPVDSYIHISQVALGEAKKEKPNESVVLYLKVGEQKI 60

Query: 911  VLGTLSRDDFPHLSLDIVLDKESELSHNSKTASVYFCGYKVI--HXXXXXXXXXXXXXDL 738
            VLGTLSRD  PHLSLD+VLD +SELSH SK+ASV+FCGY+V+                +L
Sbjct: 61   VLGTLSRDGIPHLSLDLVLDSDSELSHTSKSASVFFCGYRVLTGGNNASDFSDSEEDEEL 120

Query: 737  ALMDQENGKPETKAEVAKVSKSGKPVTGASAKQVKIVDPKK--XXXXXXXXXXXXXXXXX 564
            AL  Q+NGKPE K E AKV+K  KPV    A   K  DPKK                   
Sbjct: 121  ALEGQDNGKPEIKDEGAKVTKPSKPVPKIGA-PAKTADPKKDEGDDSDDESDDDLAGEDE 179

Query: 563  XXXXXXXXXXXXXXXXXXXETPAKKVNQGKKRPNESASKTPVPTKKAKNATPEKTDGKKG 384
                               ETPAKKV+QGKKRPNESA+KTPV  KKAK ATPEKT+GKK 
Sbjct: 180  FGSSDEMDDDSDSDEESDEETPAKKVDQGKKRPNESAAKTPVSAKKAKTATPEKTNGKKN 239

Query: 383  VHTATPHPMKKGGKTPNSVAKDKTPNSGGQLSCQSCNKSFTSESGFQQHKQAKHGGK 213
            VH ATPHP KKGGKTPNS  K ++P+S GQLSC SC KSFT+E G QQHK+AKHGG+
Sbjct: 240  VHVATPHPSKKGGKTPNS-TKGQSPSSAGQLSCASCKKSFTNEVGLQQHKKAKHGGQ 295


>gb|AFK35675.1| unknown [Lotus japonicus]
          Length = 297

 Score =  314 bits (804), Expect = 3e-83
 Identities = 176/297 (59%), Positives = 201/297 (67%), Gaps = 11/297 (3%)
 Frame = -2

Query: 1091 MEAPMEFWGVEVKVAQTVKVDPADPIDGYIHVSQVALGEA-KKDKASEPVVLYLKVDGQK 915
            MEAPMEFWGVEVKV QTVKV+P++P  GYIH+SQ ALGEA KKDKA+EPV+LYLKV+ +K
Sbjct: 1    MEAPMEFWGVEVKVGQTVKVEPSEPFPGYIHISQAALGEATKKDKAAEPVILYLKVEDKK 60

Query: 914  LVLGTLSRDDFPHLSLDIVLDKESELSHNSKTASVYFCGYKVI-HXXXXXXXXXXXXXDL 738
             VLGTL+RDD PHLS+D+VLD +SELSHNSK ASVYFCGYKV+               + 
Sbjct: 61   YVLGTLNRDDVPHLSMDLVLDDKSELSHNSKGASVYFCGYKVLTDDGDASDFSESDEEEE 120

Query: 737  ALMDQENGKPETKAEVAKVSKSGKP--VTGASAKQVKIVDPKK------XXXXXXXXXXX 582
             LM+QENGKPETK E AKV+K+ KP    G SAKQVKIVDPKK                 
Sbjct: 121  ELMEQENGKPETKTEDAKVAKTAKPAAAAGPSAKQVKIVDPKKDEEEADLDVSSPDVSGY 180

Query: 581  XXXXXXXXXXXXXXXXXXXXXXXXXETPAKKVNQGKKRPNESASKTPVPTKKAKNATPEK 402
                                      TPAKKV+QGKKRPNESASKTPV  KKAKNATPEK
Sbjct: 181  EDDLISADEDSDDESDDESDDEEETPTPAKKVDQGKKRPNESASKTPVSGKKAKNATPEK 240

Query: 401  TDGKKGVHTATPHPMKKGGKTPNSVAKDKTPNSGGQLSCQS-CNKSFTSESGFQQHK 234
             DGKK VHTATPHP K+ GKTPNS  K+K+PNSGG+ S +S  +K F S  G +Q K
Sbjct: 241  PDGKKNVHTATPHPKKQDGKTPNSFGKNKSPNSGGKFSNKSGGSKPFNSNKGGRQKK 297


>ref|NP_001241996.1| uncharacterized protein LOC100792094 [Glycine max]
            gi|255641453|gb|ACU21002.1| unknown [Glycine max]
          Length = 306

 Score =  295 bits (756), Expect = 1e-77
 Identities = 172/308 (55%), Positives = 201/308 (65%), Gaps = 19/308 (6%)
 Frame = -2

Query: 1079 MEFWGVEVKVAQTVKVDPADPIDGYIHVSQVALGEAKKDKASEPVVLYLKVDGQKLVLGT 900
            MEFWG EVKV ++VKVDPA+  +  IH+SQ ALGEAKKDK  EPVVLY+KV  QK VLGT
Sbjct: 1    MEFWGAEVKVGESVKVDPAE-FEACIHLSQAALGEAKKDKP-EPVVLYMKVGEQKFVLGT 58

Query: 899  LSRDDFPHLSLDIVLDKESELSHNSKTASVYFCGYKVIH-----XXXXXXXXXXXXXDLA 735
            LSR+  P +SL++VL+KE ELSH+SK+ASV+FCGYK  +                  D+ 
Sbjct: 59   LSREKIPQISLELVLEKEFELSHSSKSASVHFCGYKAYYDADNSDEDEFTDSDEDDEDVP 118

Query: 734  LMDQENGKPETKAEVAKVSKSGKPVTGA--SAKQVKIVDPKK----XXXXXXXXXXXXXX 573
            L++ ENGKPETKAE  KV +S K V  A  SAKQVK+V+PKK                  
Sbjct: 119  LINTENGKPETKAEDLKVPESKKAVAKASGSAKQVKVVEPKKDNEEDSDDDSDDDDFGSS 178

Query: 572  XXXXXXXXXXXXXXXXXXXXXXETPAKKVNQGKKRPNESASKTPVPTKKAKNATPEKTDG 393
                                  ETP KKV+ GKKRPNESASKTPV +KKAKNATPEKTDG
Sbjct: 179  DEEMEDADSDSDDESGDEDDDEETPPKKVDLGKKRPNESASKTPVSSKKAKNATPEKTDG 238

Query: 392  KKGVHTATPHPMKKGGKTPNSVAKDKTPNS--------GGQLSCQSCNKSFTSESGFQQH 237
            KKG HTATPHP KKGGKTPN  AK KTPNS         G LSC++C+KSFT+ESG QQH
Sbjct: 239  KKGGHTATPHPAKKGGKTPNREAKAKTPNSEAKAKTPKSGGLSCKTCSKSFTNESGLQQH 298

Query: 236  KQAKHGGK 213
             +AKHGG+
Sbjct: 299  NKAKHGGQ 306


>ref|NP_001242333.1| uncharacterized protein LOC100795506 [Glycine max]
            gi|255644846|gb|ACU22923.1| unknown [Glycine max]
          Length = 307

 Score =  295 bits (755), Expect = 1e-77
 Identities = 170/308 (55%), Positives = 196/308 (63%), Gaps = 19/308 (6%)
 Frame = -2

Query: 1079 MEFWGVEVKVAQTVKVDPADPIDGYIHVSQVALGEAKKDKASEPVVLYLKVDGQKLVLGT 900
            MEFWG EVKV ++VKVDPA+  +  IH+SQ ALGEAKKDK++EPVVLYLKV  QK VLGT
Sbjct: 1    MEFWGAEVKVGESVKVDPAE-FEACIHLSQAALGEAKKDKSNEPVVLYLKVGQQKFVLGT 59

Query: 899  LSRDDFPHLSLDIVLDKESELSHNSKTASVYFCGYKVIH---XXXXXXXXXXXXXDLALM 729
            LSR+  P + L++VL+KE ELSHNSK ASV+FCGYK  +                D+ L+
Sbjct: 60   LSREKIPQIPLELVLEKEFELSHNSKNASVHFCGYKAFYDTGDDSEEDEFTDSEEDVPLL 119

Query: 728  DQENGKPETKAEVAKVSKSGKPV--TGASAKQVKIVDPKK--------XXXXXXXXXXXX 579
              ENGKPETKAE  KV +S K V    ASAKQVKIV+PKK                    
Sbjct: 120  KAENGKPETKAEELKVPESKKAVAKASASAKQVKIVEPKKDNEEDSDDDSDEDDDFGSSD 179

Query: 578  XXXXXXXXXXXXXXXXXXXXXXXXETPAKKVNQGKKRPNESASKTPVPTKKAKNATPEKT 399
                                        KK + GKKRPNESASKTPV +KKAKNATPEKT
Sbjct: 180  EEMEDADSDSDDESDDKEDDDEETHPKNKKADLGKKRPNESASKTPVSSKKAKNATPEKT 239

Query: 398  DGKKGVHTATPHPMKKGGKTPNSVAKDKTPNS------GGQLSCQSCNKSFTSESGFQQH 237
            DGKKG HTATPHP KKGGKTP+S AK KTPN+       G LSC+SC+KSF SESG QQH
Sbjct: 240  DGKKGGHTATPHPAKKGGKTPSSEAKAKTPNNEAKTPMSGGLSCKSCSKSFNSESGLQQH 299

Query: 236  KQAKHGGK 213
             +AKHGG+
Sbjct: 300  NKAKHGGQ 307


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