BLASTX nr result

ID: Glycyrrhiza24_contig00000995 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00000995
         (706 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556264.1| PREDICTED: 30S ribosomal protein S16-like [G...   154   1e-35
ref|NP_001237282.1| uncharacterized protein LOC100527012 [Glycin...   149   7e-34
ref|XP_002460467.1| hypothetical protein SORBIDRAFT_02g028880 [S...   147   2e-33
ref|NP_001141389.1| 30S ribosomal protein S16 [Zea mays] gi|1947...   146   3e-33
ref|NP_001063564.1| Os09g0498100 [Oryza sativa Japonica Group] g...   145   6e-33

>ref|XP_003556264.1| PREDICTED: 30S ribosomal protein S16-like [Glycine max]
          Length = 123

 Score =  154 bits (390), Expect = 1e-35
 Identities = 78/123 (63%), Positives = 90/123 (73%), Gaps = 7/123 (5%)
 Frame = -2

Query: 627 MVVRIRFTRLGCRNHPFYRIIATDSKATRDGKHIEVLGYYNPTADKDDARRMALRLERVK 448
           MVV+IR  RLGCRNHPFYR++ TDSK TRDGK +EVLG+YNP A KDD +RM+L+LERVK
Sbjct: 1   MVVKIRLARLGCRNHPFYRVVVTDSKTTRDGKQLEVLGFYNPVAGKDDEKRMSLKLERVK 60

Query: 447 YWLSVGAQPSEPVQSLLLRAGLLPPSPMEAMKREGADQNED-------DGVSPEAIFSIG 289
           YWLSVGA+PSEPV+ LL RAGL            G   N+D       +GVSPEAIFSIG
Sbjct: 61  YWLSVGAKPSEPVEHLLFRAGLGQSHQFPVAALNGHFLNQDQPTNADHNGVSPEAIFSIG 120

Query: 288 LPV 280
           L V
Sbjct: 121 LQV 123


>ref|NP_001237282.1| uncharacterized protein LOC100527012 [Glycine max]
           gi|255631366|gb|ACU16050.1| unknown [Glycine max]
          Length = 124

 Score =  149 bits (375), Expect = 7e-34
 Identities = 75/124 (60%), Positives = 88/124 (70%), Gaps = 8/124 (6%)
 Frame = -2

Query: 627 MVVRIRFTRLGCRNHPFYRIIATDSKATRDGKHIEVLGYYNPTADKDDARRMALRLERVK 448
           MVV+IR  RLGCRNHPFYR++ TDSK TRDGK  EVLG+YNP A KDD +RM+L+LER+K
Sbjct: 1   MVVKIRLARLGCRNHPFYRVVVTDSKTTRDGKQPEVLGFYNPVAGKDDDKRMSLKLERIK 60

Query: 447 YWLSVGAQPSEPVQSLLLRAGLLPPSPMEAMKREGADQNED--------DGVSPEAIFSI 292
           YWLSVGA+PSEPV+ LL RAGL            G   N+D        +G+SPEAIFSI
Sbjct: 61  YWLSVGAKPSEPVEHLLFRAGLGQSHQFPVAALNGHILNQDQPTIAADHNGISPEAIFSI 120

Query: 291 GLPV 280
            L V
Sbjct: 121 ALQV 124


>ref|XP_002460467.1| hypothetical protein SORBIDRAFT_02g028880 [Sorghum bicolor]
           gi|241923844|gb|EER96988.1| hypothetical protein
           SORBIDRAFT_02g028880 [Sorghum bicolor]
          Length = 138

 Score =  147 bits (372), Expect = 2e-33
 Identities = 67/99 (67%), Positives = 80/99 (80%)
 Frame = -2

Query: 627 MVVRIRFTRLGCRNHPFYRIIATDSKATRDGKHIEVLGYYNPTADKDDARRMALRLERVK 448
           MVVRIR  R GCRN PFYR++A DS++ RDGKH+EVLGYYNP   KD  +RM L+ +RVK
Sbjct: 1   MVVRIRLARFGCRNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGKDGGKRMGLKFDRVK 60

Query: 447 YWLSVGAQPSEPVQSLLLRAGLLPPSPMEAMKREGADQN 331
           YWLSVGAQPS+PVQS+L RAGLLPP PM AM R+G  ++
Sbjct: 61  YWLSVGAQPSDPVQSILFRAGLLPPPPMLAMARKGGPRD 99


>ref|NP_001141389.1| 30S ribosomal protein S16 [Zea mays] gi|194704294|gb|ACF86231.1|
           unknown [Zea mays] gi|195622024|gb|ACG32842.1| 30S
           ribosomal protein S16 [Zea mays]
           gi|195658841|gb|ACG48888.1| 30S ribosomal protein S16
           [Zea mays] gi|414886099|tpg|DAA62113.1| TPA: 30S
           ribosomal protein S16 [Zea mays]
          Length = 138

 Score =  146 bits (369), Expect = 3e-33
 Identities = 66/99 (66%), Positives = 80/99 (80%)
 Frame = -2

Query: 627 MVVRIRFTRLGCRNHPFYRIIATDSKATRDGKHIEVLGYYNPTADKDDARRMALRLERVK 448
           MVVRIR  R GCRN PFYR++A DS++ RDGKH+EVLGYYNP   KD  +RM L+ +RVK
Sbjct: 1   MVVRIRLARFGCRNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGKDGGKRMGLKFDRVK 60

Query: 447 YWLSVGAQPSEPVQSLLLRAGLLPPSPMEAMKREGADQN 331
           YWLSVGAQPS+PVQS+L RAGLLPP P+ AM R+G  ++
Sbjct: 61  YWLSVGAQPSDPVQSILFRAGLLPPPPLLAMARKGGPRD 99


>ref|NP_001063564.1| Os09g0498100 [Oryza sativa Japonica Group]
           gi|113631797|dbj|BAF25478.1| Os09g0498100 [Oryza sativa
           Japonica Group] gi|125564238|gb|EAZ09618.1| hypothetical
           protein OsI_31902 [Oryza sativa Indica Group]
           gi|222641852|gb|EEE69984.1| hypothetical protein
           OsJ_29887 [Oryza sativa Japonica Group]
          Length = 136

 Score =  145 bits (367), Expect = 6e-33
 Identities = 66/99 (66%), Positives = 79/99 (79%)
 Frame = -2

Query: 627 MVVRIRFTRLGCRNHPFYRIIATDSKATRDGKHIEVLGYYNPTADKDDARRMALRLERVK 448
           MVVRIR  R GCRN PFYR++A DS++ RDGKH+EVLGYYNP   KD  +RM L+ +RVK
Sbjct: 1   MVVRIRLARFGCRNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGKDGGKRMGLKFDRVK 60

Query: 447 YWLSVGAQPSEPVQSLLLRAGLLPPSPMEAMKREGADQN 331
           YWLSVGAQPS+PVQ +L RAGLLPP PM AM R+G  ++
Sbjct: 61  YWLSVGAQPSDPVQRILFRAGLLPPPPMLAMARKGGPRD 99


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