BLASTX nr result
ID: Glycyrrhiza24_contig00000974
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00000974
(1366 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001242641.1| uncharacterized protein LOC100793275 [Glycin... 619 e-175
ref|XP_003541882.1| PREDICTED: F-box protein SKP2B-like isoform ... 615 e-173
ref|XP_003526665.1| PREDICTED: F-box protein SKP2A-like [Glycine... 607 e-171
gb|ACJ84890.1| unknown [Medicago truncatula] 605 e-171
gb|ACJ85491.1| unknown [Medicago truncatula] 603 e-170
>ref|NP_001242641.1| uncharacterized protein LOC100793275 [Glycine max]
gi|255644880|gb|ACU22940.1| unknown [Glycine max]
Length = 371
Score = 619 bits (1597), Expect = e-175
Identities = 303/336 (90%), Positives = 319/336 (94%)
Frame = +3
Query: 54 VITEWKDIPVELLMQILSLVDDRTVMIASEVCRGWRDAICFGLTRLSLSWCSKNMNNLVL 233
VITEWKDIPVELLMQILSLVDD+TV+IASEVCRGWR+AICFGLTRLSLSWCSKNMNNLVL
Sbjct: 38 VITEWKDIPVELLMQILSLVDDQTVIIASEVCRGWREAICFGLTRLSLSWCSKNMNNLVL 97
Query: 234 SLAPKFTKLQTLILRQDKPQLEDNAVEAIAKFCRDLQILDLSKSFKLTDRSLYAIALGCR 413
SL+PKFTKLQTLILRQDKPQLEDNAVE IA FC DLQILDLSKSFKLTDRSLYA+ALGCR
Sbjct: 98 SLSPKFTKLQTLILRQDKPQLEDNAVETIANFCHDLQILDLSKSFKLTDRSLYAVALGCR 157
Query: 414 DLTKLNISGCSAFSDNALAYLASFCRKLKVLNLCGCVRAASDTALQAIGHYCNELQSLNL 593
DLTKLNISGCSAFSDNALAYLASFCRKLKVLNLCGCV+AASDTALQAIGHYCN+LQ LNL
Sbjct: 158 DLTKLNISGCSAFSDNALAYLASFCRKLKVLNLCGCVKAASDTALQAIGHYCNQLQFLNL 217
Query: 594 GWCEHVSDVGVMSLAYGCPDLRTLDLCGCVLITDDSVIALANRCPHLRSLGLYYCRNITD 773
GWCE+VSDVGVMSL YGCPDLRTLDLCGCVLITDDSVI LANRCPHLRSLGLYYC++ITD
Sbjct: 218 GWCENVSDVGVMSLTYGCPDLRTLDLCGCVLITDDSVIVLANRCPHLRSLGLYYCQSITD 277
Query: 774 RAMYSLAQSKVNNRMMWGSSVKGGNDEDGLRTLNISQCTALTPSAVQAVCDSSPALHTCS 953
+AMYSLAQSK+NNR +WGS GGND+DGLRTLNISQCTALTPSAVQAVCDS P+LHTCS
Sbjct: 278 KAMYSLAQSKLNNR-VWGSVKGGGNDDDGLRTLNISQCTALTPSAVQAVCDSCPSLHTCS 336
Query: 954 GRHSLIMSGCLNLTSVHCACAVHPHRAISALPHPAH 1061
GRHSLIMSGCLNLTSVHC CA HRAI+ LPH AH
Sbjct: 337 GRHSLIMSGCLNLTSVHCVCAGQAHRAIT-LPHAAH 371
>ref|XP_003541882.1| PREDICTED: F-box protein SKP2B-like isoform 1 [Glycine max]
gi|356546952|ref|XP_003541883.1| PREDICTED: F-box protein
SKP2B-like isoform 2 [Glycine max]
Length = 375
Score = 615 bits (1585), Expect = e-173
Identities = 306/339 (90%), Positives = 319/339 (94%), Gaps = 3/339 (0%)
Frame = +3
Query: 54 VITEWKDIPVELLMQILSLVDDRTVMIASEVCRGWRDAICFGLTRLSLSWCSKNMNNLVL 233
VITEWKDIPVELLMQILSLVDD+TVMIASEVCRGWR+AICFGLTRLSLSWCSKNMNNLVL
Sbjct: 39 VITEWKDIPVELLMQILSLVDDQTVMIASEVCRGWREAICFGLTRLSLSWCSKNMNNLVL 98
Query: 234 SLAPKFTKLQTLILRQDKPQLEDNAVEAIAKFCRDLQILDLSKSFKLTDRSLYAIALGCR 413
SLAPKFTKLQTLILRQDKPQLEDNAVE I+ FC DLQILDLSKSFKLTD SLYAIALGC+
Sbjct: 99 SLAPKFTKLQTLILRQDKPQLEDNAVETISNFCHDLQILDLSKSFKLTDHSLYAIALGCQ 158
Query: 414 DLTKLNISGCSAFSDNALAYLASFCRKLKVLNLCGCVRAASDTALQAIGHYCNELQSLNL 593
DLTKLNISGCSAFSDNALAYLASFCRKLKVLNLCGCV+AASDTALQAIGHYCN+LQ LNL
Sbjct: 159 DLTKLNISGCSAFSDNALAYLASFCRKLKVLNLCGCVKAASDTALQAIGHYCNQLQFLNL 218
Query: 594 GWCEHVSDVGVMSLAYGCPDLRTLDLCGCVLITDDSVIALANRCPHLRSLGLYYCRNITD 773
GWCE+VSDVGVMSLAYGC DLRTLDLCGCVLITDDSVIALANRCPHLRSLGLY+C+NITD
Sbjct: 219 GWCENVSDVGVMSLAYGCRDLRTLDLCGCVLITDDSVIALANRCPHLRSLGLYFCQNITD 278
Query: 774 RAMYSLAQSKVNNRMMWGSSVKGGN---DEDGLRTLNISQCTALTPSAVQAVCDSSPALH 944
RAMYSLAQSKVNNR MWGS GGN ++DGLRTLNISQCTALTPSAVQAVCDS P+LH
Sbjct: 279 RAMYSLAQSKVNNR-MWGSMKGGGNNDDNDDGLRTLNISQCTALTPSAVQAVCDSCPSLH 337
Query: 945 TCSGRHSLIMSGCLNLTSVHCACAVHPHRAISALPHPAH 1061
TCSGRHSLIMSGCLNLTSVHCACA HRA + LPH AH
Sbjct: 338 TCSGRHSLIMSGCLNLTSVHCACAGQAHRAFT-LPHAAH 375
>ref|XP_003526665.1| PREDICTED: F-box protein SKP2A-like [Glycine max]
Length = 372
Score = 607 bits (1566), Expect = e-171
Identities = 297/336 (88%), Positives = 311/336 (92%)
Frame = +3
Query: 54 VITEWKDIPVELLMQILSLVDDRTVMIASEVCRGWRDAICFGLTRLSLSWCSKNMNNLVL 233
VITEWKDIPVELLMQILSLVDD+TV+IAS VCRGWRDAI FGL RLSLSWCSKNMNNLVL
Sbjct: 38 VITEWKDIPVELLMQILSLVDDQTVIIASGVCRGWRDAIYFGLARLSLSWCSKNMNNLVL 97
Query: 234 SLAPKFTKLQTLILRQDKPQLEDNAVEAIAKFCRDLQILDLSKSFKLTDRSLYAIALGCR 413
SL PKF KLQTLILRQDKPQLEDNAVE IAK C +LQILDLSKSFKLTDRSLY +ALGCR
Sbjct: 98 SLVPKFAKLQTLILRQDKPQLEDNAVETIAKCCHELQILDLSKSFKLTDRSLYELALGCR 157
Query: 414 DLTKLNISGCSAFSDNALAYLASFCRKLKVLNLCGCVRAASDTALQAIGHYCNELQSLNL 593
DLTKLNISGCSAFSDNALAYLASFCRKLKVLNLCGCVRAASDTALQAIG YCN+LQSLNL
Sbjct: 158 DLTKLNISGCSAFSDNALAYLASFCRKLKVLNLCGCVRAASDTALQAIGQYCNQLQSLNL 217
Query: 594 GWCEHVSDVGVMSLAYGCPDLRTLDLCGCVLITDDSVIALANRCPHLRSLGLYYCRNITD 773
GWC++V DVGV +LAYGCPDLR +DLCGCV ITDDSVIALA RCPHLRSLGLYYC+NITD
Sbjct: 218 GWCDNVGDVGVTTLAYGCPDLRIVDLCGCVRITDDSVIALATRCPHLRSLGLYYCKNITD 277
Query: 774 RAMYSLAQSKVNNRMMWGSSVKGGNDEDGLRTLNISQCTALTPSAVQAVCDSSPALHTCS 953
RAMYSLA SKVNNR MWG+ GGNDEDGLRTLNISQCTALTPSAVQAVCDS P+LHTCS
Sbjct: 278 RAMYSLAHSKVNNR-MWGTVKGGGNDEDGLRTLNISQCTALTPSAVQAVCDSFPSLHTCS 336
Query: 954 GRHSLIMSGCLNLTSVHCACAVHPHRAISALPHPAH 1061
GRHSLIMSGCLNLTSVHCACAVH HRA + P+PAH
Sbjct: 337 GRHSLIMSGCLNLTSVHCACAVHAHRAFTTFPYPAH 372
>gb|ACJ84890.1| unknown [Medicago truncatula]
Length = 368
Score = 605 bits (1561), Expect = e-171
Identities = 297/336 (88%), Positives = 310/336 (92%)
Frame = +3
Query: 54 VITEWKDIPVELLMQILSLVDDRTVMIASEVCRGWRDAICFGLTRLSLSWCSKNMNNLVL 233
VITEWKDIPVELLMQILSLVDD+TV+ S VCRGWRD+I FGL RLSLSWC+KNMNNLVL
Sbjct: 35 VITEWKDIPVELLMQILSLVDDQTVIRVSGVCRGWRDSIYFGLARLSLSWCNKNMNNLVL 94
Query: 234 SLAPKFTKLQTLILRQDKPQLEDNAVEAIAKFCRDLQILDLSKSFKLTDRSLYAIALGCR 413
SL PKF KLQTLILRQDKPQL+DN V IA FC DLQILDLSKSFKLTDRSLYAIA GCR
Sbjct: 95 SLVPKFAKLQTLILRQDKPQLDDNVVGTIANFCHDLQILDLSKSFKLTDRSLYAIAHGCR 154
Query: 414 DLTKLNISGCSAFSDNALAYLASFCRKLKVLNLCGCVRAASDTALQAIGHYCNELQSLNL 593
DLTKLNISGCSAFSDNALAYLA FCRKLKVLNLCGCVRAASDTALQAIGHYCN+LQSLNL
Sbjct: 155 DLTKLNISGCSAFSDNALAYLAGFCRKLKVLNLCGCVRAASDTALQAIGHYCNQLQSLNL 214
Query: 594 GWCEHVSDVGVMSLAYGCPDLRTLDLCGCVLITDDSVIALANRCPHLRSLGLYYCRNITD 773
GWC+ V DVGVMSLAYGCPDLRT+DLCGCV ITDDSVIALAN CPHLRSLGLY+C+NITD
Sbjct: 215 GWCDKVGDVGVMSLAYGCPDLRTVDLCGCVYITDDSVIALANGCPHLRSLGLYFCKNITD 274
Query: 774 RAMYSLAQSKVNNRMMWGSSVKGGNDEDGLRTLNISQCTALTPSAVQAVCDSSPALHTCS 953
AMYSLAQSKV NR MWG SVKGGNDEDGLRTLNISQCT+LTPSAVQAVCDSSPALHTCS
Sbjct: 275 NAMYSLAQSKVKNR-MWG-SVKGGNDEDGLRTLNISQCTSLTPSAVQAVCDSSPALHTCS 332
Query: 954 GRHSLIMSGCLNLTSVHCACAVHPHRAISALPHPAH 1061
GRHSLIMSGCLNLT VHCACA H HRA++A PHPAH
Sbjct: 333 GRHSLIMSGCLNLTEVHCACAGHAHRAMNAFPHPAH 368
>gb|ACJ85491.1| unknown [Medicago truncatula]
Length = 368
Score = 603 bits (1556), Expect = e-170
Identities = 296/336 (88%), Positives = 309/336 (91%)
Frame = +3
Query: 54 VITEWKDIPVELLMQILSLVDDRTVMIASEVCRGWRDAICFGLTRLSLSWCSKNMNNLVL 233
VITEWKDIPVELLMQILSLVDD+TV+ S VCRGWRD+I FGL RLSLSWC+KNMNNLVL
Sbjct: 35 VITEWKDIPVELLMQILSLVDDQTVIRVSGVCRGWRDSIYFGLARLSLSWCNKNMNNLVL 94
Query: 234 SLAPKFTKLQTLILRQDKPQLEDNAVEAIAKFCRDLQILDLSKSFKLTDRSLYAIALGCR 413
SL PKF KLQTLILRQDKPQL+DN V IA FC DLQILDLSKSFKLTD SLYAIA GCR
Sbjct: 95 SLVPKFAKLQTLILRQDKPQLDDNVVGTIANFCHDLQILDLSKSFKLTDHSLYAIAHGCR 154
Query: 414 DLTKLNISGCSAFSDNALAYLASFCRKLKVLNLCGCVRAASDTALQAIGHYCNELQSLNL 593
DLTKLNISGCSAFSDNALAYLA FCRKLKVLNLCGCVRAASDTALQAIGHYCN+LQSLNL
Sbjct: 155 DLTKLNISGCSAFSDNALAYLAGFCRKLKVLNLCGCVRAASDTALQAIGHYCNQLQSLNL 214
Query: 594 GWCEHVSDVGVMSLAYGCPDLRTLDLCGCVLITDDSVIALANRCPHLRSLGLYYCRNITD 773
GWC+ V DVGVMSLAYGCPDLRT+DLCGCV ITDDSVIALAN CPHLRSLGLY+C+NITD
Sbjct: 215 GWCDKVGDVGVMSLAYGCPDLRTVDLCGCVYITDDSVIALANGCPHLRSLGLYFCKNITD 274
Query: 774 RAMYSLAQSKVNNRMMWGSSVKGGNDEDGLRTLNISQCTALTPSAVQAVCDSSPALHTCS 953
AMYSLAQSKV NR MWG SVKGGNDEDGLRTLNISQCT+LTPSAVQAVCDSSPALHTCS
Sbjct: 275 NAMYSLAQSKVKNR-MWG-SVKGGNDEDGLRTLNISQCTSLTPSAVQAVCDSSPALHTCS 332
Query: 954 GRHSLIMSGCLNLTSVHCACAVHPHRAISALPHPAH 1061
GRHSLIMSGCLNLT VHCACA H HRA++A PHPAH
Sbjct: 333 GRHSLIMSGCLNLTEVHCACAGHAHRAMNAFPHPAH 368