BLASTX nr result

ID: Glycyrrhiza24_contig00000970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00000970
         (609 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK48333.1| unknown [Medicago truncatula]                          117   2e-24
ref|NP_001235677.1| uncharacterized protein LOC100527666 [Glycin...   111   9e-23
ref|XP_003546892.1| PREDICTED: photosystem II 5 kDa protein, chl...   111   1e-22
ref|XP_003599257.1| Photosystem II 5 kDa protein [Medicago trunc...   102   5e-20
ref|NP_001237828.1| uncharacterized protein LOC100306374 [Glycin...    97   2e-18

>gb|AFK48333.1| unknown [Medicago truncatula]
          Length = 108

 Score =  117 bits (292), Expect = 2e-24
 Identities = 62/98 (63%), Positives = 73/98 (74%), Gaps = 2/98 (2%)
 Frame = +3

Query: 138 FLGSSAVANRSPVATQRRLVVANAARGVE--KVKVSYESDKEGNSNGRRNIMFXXXXXXX 311
           F GSSA+ANRSPVATQR+LVVANAA+ VE  K+KV+Y+++KE  +NGRRNIMF       
Sbjct: 11  FGGSSAIANRSPVATQRKLVVANAAKAVEGGKMKVNYDNEKE-ETNGRRNIMFAAAAAAV 69

Query: 312 XXXXXXXXXXDEPKPGTPEAKKVYAPVCVTMPTARVCR 425
                     DEPK G+PEAKK YAPVCVTMPTAR+CR
Sbjct: 70  CSVAGMALAADEPKRGSPEAKKAYAPVCVTMPTARICR 107


>ref|NP_001235677.1| uncharacterized protein LOC100527666 [Glycine max]
           gi|255632908|gb|ACU16808.1| unknown [Glycine max]
          Length = 104

 Score =  111 bits (278), Expect = 9e-23
 Identities = 59/96 (61%), Positives = 67/96 (69%)
 Frame = +3

Query: 141 LGSSAVANRSPVATQRRLVVANAARGVEKVKVSYESDKEGNSNGRRNIMFXXXXXXXXXX 320
           LGS  V NRS VATQRR +V NAA+ VE  KVSY++D +G SNGRRN+MF          
Sbjct: 11  LGSPTVTNRSAVATQRRSLVVNAAKAVEAEKVSYDNDMDG-SNGRRNLMFAAAAAAVCSV 69

Query: 321 XXXXXXXDEPKPGTPEAKKVYAPVCVTMPTARVCRN 428
                  DEPKPGTPEAKK YAP+CVTMPTAR+CRN
Sbjct: 70  AGMAVA-DEPKPGTPEAKKKYAPICVTMPTARICRN 104


>ref|XP_003546892.1| PREDICTED: photosystem II 5 kDa protein, chloroplastic-like
           [Glycine max]
          Length = 105

 Score =  111 bits (277), Expect = 1e-22
 Identities = 57/96 (59%), Positives = 65/96 (67%)
 Frame = +3

Query: 141 LGSSAVANRSPVATQRRLVVANAARGVEKVKVSYESDKEGNSNGRRNIMFXXXXXXXXXX 320
           LG  AV NR  VATQRR +V NAA+ VE  KVSY++D +G SNGRRN+MF          
Sbjct: 11  LGGPAVTNRLAVATQRRSLVVNAAKAVEAEKVSYDNDMDG-SNGRRNLMFAAAAAAAVCS 69

Query: 321 XXXXXXXDEPKPGTPEAKKVYAPVCVTMPTARVCRN 428
                  DEPKPGTP AKK YAP+CVTMPTAR+CRN
Sbjct: 70  VAGMAVADEPKPGTPAAKKKYAPICVTMPTARICRN 105


>ref|XP_003599257.1| Photosystem II 5 kDa protein [Medicago truncatula]
           gi|355488305|gb|AES69508.1| Photosystem II 5 kDa protein
           [Medicago truncatula]
          Length = 106

 Score =  102 bits (254), Expect = 5e-20
 Identities = 56/97 (57%), Positives = 65/97 (67%), Gaps = 1/97 (1%)
 Frame = +3

Query: 141 LGSSAVANRSPVATQRRLVVANAARGVEKVK-VSYESDKEGNSNGRRNIMFXXXXXXXXX 317
           LG  AV N+S VA+QRRLVV NA R VE  K + Y++ KEG SNGRR++MF         
Sbjct: 11  LGFPAVTNQSSVASQRRLVVVNAVRAVEGEKMIRYDNSKEG-SNGRRDLMFAAAAAAVST 69

Query: 318 XXXXXXXXDEPKPGTPEAKKVYAPVCVTMPTARVCRN 428
                   +EPK GTPEAKK YAPVCVTMPTAR+CRN
Sbjct: 70  FAGVAMADEEPKRGTPEAKKKYAPVCVTMPTARICRN 106


>ref|NP_001237828.1| uncharacterized protein LOC100306374 [Glycine max]
           gi|255628337|gb|ACU14513.1| unknown [Glycine max]
          Length = 104

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 55/97 (56%), Positives = 61/97 (62%), Gaps = 1/97 (1%)
 Frame = +3

Query: 141 LGSSAVANRSPVATQRRLVVANAA-RGVEKVKVSYESDKEGNSNGRRNIMFXXXXXXXXX 317
           LG  AV NRS  ATQRR VV NAA + VE  KVSY+++    SN RRN+MF         
Sbjct: 11  LGCPAVTNRSAAATQRRSVVVNAASKSVEGEKVSYDNN---GSNARRNLMFATAAAAVCS 67

Query: 318 XXXXXXXXDEPKPGTPEAKKVYAPVCVTMPTARVCRN 428
                   DEPKPGT EAKK YAPVCVT PTAR+CRN
Sbjct: 68  FAAGMALADEPKPGTSEAKKKYAPVCVTNPTARICRN 104


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