BLASTX nr result

ID: Glycyrrhiza24_contig00000968 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00000968
         (566 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK42944.1| unknown [Medicago truncatula]                          139   2e-31
ref|XP_003624198.1| Ycf60-like protein [Medicago truncatula] gi|...   139   2e-31
ref|XP_003552457.1| PREDICTED: tic20 family protein-like [Glycin...   124   1e-26
ref|XP_002328962.1| predicted protein [Populus trichocarpa] gi|1...   117   1e-24
gb|AAK91363.1| At2g47840/F17A22.23 [Arabidopsis thaliana] gi|203...   117   1e-24

>gb|AFK42944.1| unknown [Medicago truncatula]
          Length = 178

 Score =  139 bits (351), Expect = 2e-31
 Identities = 78/131 (59%), Positives = 86/131 (65%), Gaps = 3/131 (2%)
 Frame = -1

Query: 392 SLSLLHRPCIIRTHTPNXXXXXXXXXXXXXXXXXXXXXP---RLRNGVVTARMXXXXXSP 222
           SLS+LHRPCI   HTP                          +LRNGVV A        P
Sbjct: 3   SLSILHRPCIFH-HTPKSSTLTLKPKPNSLSFSPLTKPSLKLKLRNGVVKASTST----P 57

Query: 221 QATERVISIAAYTLPFFNSLQYGRYILSQYPKIAILFDPIIPFLSLYRSIPYASFVAFFA 42
            A ER+ISIAAY LPFFNSLQYG  IL+QYPK+A+LFDPIIPFLS YRS+PYASF+AFFA
Sbjct: 58  AAPERLISIAAYALPFFNSLQYGHNILTQYPKVALLFDPIIPFLSFYRSLPYASFIAFFA 117

Query: 41  LYLGIVRNPNF 9
           LYLGIVRNP F
Sbjct: 118 LYLGIVRNPIF 128


>ref|XP_003624198.1| Ycf60-like protein [Medicago truncatula]
           gi|355499213|gb|AES80416.1| Ycf60-like protein [Medicago
           truncatula]
          Length = 327

 Score =  139 bits (351), Expect = 2e-31
 Identities = 78/131 (59%), Positives = 86/131 (65%), Gaps = 3/131 (2%)
 Frame = -1

Query: 392 SLSLLHRPCIIRTHTPNXXXXXXXXXXXXXXXXXXXXXP---RLRNGVVTARMXXXXXSP 222
           SLS+LHRPCI   HTP                          +LRNGVV A        P
Sbjct: 3   SLSILHRPCIFH-HTPKSSTLTLKPKPNSLSFSPLTKPSLKLKLRNGVVKASTST----P 57

Query: 221 QATERVISIAAYTLPFFNSLQYGRYILSQYPKIAILFDPIIPFLSLYRSIPYASFVAFFA 42
            A ER+ISIAAY LPFFNSLQYG  IL+QYPK+A+LFDPIIPFLS YRS+PYASF+AFFA
Sbjct: 58  AAPERLISIAAYALPFFNSLQYGHNILTQYPKVALLFDPIIPFLSFYRSLPYASFIAFFA 117

Query: 41  LYLGIVRNPNF 9
           LYLGIVRNP F
Sbjct: 118 LYLGIVRNPIF 128


>ref|XP_003552457.1| PREDICTED: tic20 family protein-like [Glycine max]
          Length = 201

 Score =  124 bits (310), Expect = 1e-26
 Identities = 60/87 (68%), Positives = 71/87 (81%)
 Frame = -1

Query: 269 RNGVVTARMXXXXXSPQATERVISIAAYTLPFFNSLQYGRYILSQYPKIAILFDPIIPFL 90
           +NG V  RM      P  TER+ISIA+Y LPFFNSLQYGRY+L+Q P +A+LFDPI+P L
Sbjct: 38  QNGAVGTRMSNTATPPP-TERLISIASYALPFFNSLQYGRYLLAQNPTLAVLFDPIVPLL 96

Query: 89  SLYRSIPYASFVAFFALYLGIVRNPNF 9
           + YRSIPY+SFVAFFALYLGIVRNP+F
Sbjct: 97  AFYRSIPYSSFVAFFALYLGIVRNPSF 123


>ref|XP_002328962.1| predicted protein [Populus trichocarpa] gi|118482664|gb|ABK93251.1|
           unknown [Populus trichocarpa]
           gi|222839196|gb|EEE77547.1| predicted protein [Populus
           trichocarpa]
          Length = 209

 Score =  117 bits (293), Expect = 1e-24
 Identities = 52/71 (73%), Positives = 64/71 (90%)
 Frame = -1

Query: 218 ATERVISIAAYTLPFFNSLQYGRYILSQYPKIAILFDPIIPFLSLYRSIPYASFVAFFAL 39
           AT+R++S  +YTLPFFNSLQYGR++ + YP +A+L DP+IP LSLYRSIPYASFVAFFAL
Sbjct: 59  ATDRLVSAVSYTLPFFNSLQYGRFLFTTYPSLALLVDPLIPLLSLYRSIPYASFVAFFAL 118

Query: 38  YLGIVRNPNFS 6
           YLG+VRNP+FS
Sbjct: 119 YLGVVRNPSFS 129


>gb|AAK91363.1| At2g47840/F17A22.23 [Arabidopsis thaliana]
           gi|20334890|gb|AAM16201.1| At2g47840/F17A22.23
           [Arabidopsis thaliana]
          Length = 208

 Score =  117 bits (293), Expect = 1e-24
 Identities = 52/71 (73%), Positives = 64/71 (90%)
 Frame = -1

Query: 218 ATERVISIAAYTLPFFNSLQYGRYILSQYPKIAILFDPIIPFLSLYRSIPYASFVAFFAL 39
           ATERVISIA+Y LPFFNSLQYGR++ +QYP++ +LF+PI P L+LYRS+PYASFVAFF L
Sbjct: 57  ATERVISIASYALPFFNSLQYGRFLFAQYPRLGLLFEPIFPILNLYRSVPYASFVAFFGL 116

Query: 38  YLGIVRNPNFS 6
           YLG+VRN +FS
Sbjct: 117 YLGVVRNTSFS 127