BLASTX nr result

ID: Glycyrrhiza24_contig00000949 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00000949
         (1105 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548264.1| PREDICTED: arginine/serine-rich-splicing fac...   397   e-108
ref|XP_003528779.1| PREDICTED: arginine/serine-rich-splicing fac...   391   e-106
gb|ACU23171.1| unknown [Glycine max]                                  389   e-106
gb|AFK41208.1| unknown [Medicago truncatula]                          373   e-101
ref|XP_003627532.1| Arginine/serine-rich splicing factor [Medica...   373   e-101

>ref|XP_003548264.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Glycine
            max]
          Length = 264

 Score =  397 bits (1019), Expect = e-108
 Identities = 193/236 (81%), Positives = 209/236 (88%)
 Frame = -2

Query: 1023 MRPVFVGNFEYDTRQSELERLFAKYGRIERVDMKSGYAFVYYEDEQDAEDAIRVLDNFPF 844
            MRP+F GN EYDTRQSELERLF+KYGRI+RVDMKSG+AFVYYEDE+DAE+AIR LDN PF
Sbjct: 1    MRPIFAGNLEYDTRQSELERLFSKYGRIDRVDMKSGFAFVYYEDERDAEEAIRALDNVPF 60

Query: 843  GYEKRRLSVEWARGERGRPRDGSRANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLH 664
            G+EKRRLSVEWARGERGR RDGS+ANQ+PTKTLFVINFDPIRTRVRDIE+HFEPYG VLH
Sbjct: 61   GHEKRRLSVEWARGERGRHRDGSKANQKPTKTLFVINFDPIRTRVRDIEKHFEPYGNVLH 120

Query: 663  VRIRRNFAFVQFETQEDATKALECTHMSKVLDRVVSVEYALRDDDEKGDSYDSPRRGGYG 484
            VRIRRNFAFVQFETQEDATKA+ECT+MSK+LDRVVSVEYALRDD E+GD+YDSPRRGGY 
Sbjct: 121  VRIRRNFAFVQFETQEDATKAIECTNMSKILDRVVSVEYALRDDGERGDNYDSPRRGGY- 179

Query: 483  XXXXXXXXXXXXPDYGHPRSPVYDRYNGPTYDRRRSPDYGRPRSLDYGRHRSPEYG 316
                        PDYG PRSPVYDRYNG   DRRRSPDYGR RS DYGR RSP+YG
Sbjct: 180  ERSPSPYHRRPSPDYGRPRSPVYDRYNGGGPDRRRSPDYGRHRSPDYGRRRSPDYG 235


>ref|XP_003528779.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Glycine
            max]
          Length = 259

 Score =  391 bits (1004), Expect = e-106
 Identities = 191/236 (80%), Positives = 205/236 (86%)
 Frame = -2

Query: 1023 MRPVFVGNFEYDTRQSELERLFAKYGRIERVDMKSGYAFVYYEDEQDAEDAIRVLDNFPF 844
            MRP+F GN EYDTRQSELERLFAKYGRI+RVDMKSG+AFVYYEDE+DAE+AIR LDN PF
Sbjct: 1    MRPIFAGNLEYDTRQSELERLFAKYGRIDRVDMKSGFAFVYYEDERDAEEAIRALDNVPF 60

Query: 843  GYEKRRLSVEWARGERGRPRDGSRANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLH 664
            G+EKRRLSVEWARGERGR  DGS+ANQ+PTKTLFVINFDPIRTRVRDIE+HFEPYG VLH
Sbjct: 61   GHEKRRLSVEWARGERGRHHDGSKANQKPTKTLFVINFDPIRTRVRDIEKHFEPYGNVLH 120

Query: 663  VRIRRNFAFVQFETQEDATKALECTHMSKVLDRVVSVEYALRDDDEKGDSYDSPRRGGYG 484
            VRIRRNFAFVQFETQEDATKALECT+MSK+LDRVVSVEYALRDD E+GD+YDSPRR G  
Sbjct: 121  VRIRRNFAFVQFETQEDATKALECTNMSKILDRVVSVEYALRDDGERGDNYDSPRRRGGY 180

Query: 483  XXXXXXXXXXXXPDYGHPRSPVYDRYNGPTYDRRRSPDYGRPRSLDYGRHRSPEYG 316
                        PDYG PRSPVYDRYNG   D RRSPDYGR RS DYGR RSP+YG
Sbjct: 181  ERSPSPYHRRPSPDYGRPRSPVYDRYNGGGPDMRRSPDYGRHRSPDYGRRRSPDYG 236


>gb|ACU23171.1| unknown [Glycine max]
          Length = 259

 Score =  389 bits (1000), Expect = e-106
 Identities = 190/236 (80%), Positives = 205/236 (86%)
 Frame = -2

Query: 1023 MRPVFVGNFEYDTRQSELERLFAKYGRIERVDMKSGYAFVYYEDEQDAEDAIRVLDNFPF 844
            MRP+F GN EYDTRQSELERLFAKYGRI+RVDMKSG+AFV+YEDE+DAE+AIR LDN PF
Sbjct: 1    MRPIFAGNLEYDTRQSELERLFAKYGRIDRVDMKSGFAFVFYEDERDAEEAIRALDNVPF 60

Query: 843  GYEKRRLSVEWARGERGRPRDGSRANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLH 664
            G+EKRRLSVEWARGERGR  DGS+ANQ+PTKTLFVINFDPIRTRVRDIE+HFEPYG VLH
Sbjct: 61   GHEKRRLSVEWARGERGRHHDGSKANQKPTKTLFVINFDPIRTRVRDIEKHFEPYGNVLH 120

Query: 663  VRIRRNFAFVQFETQEDATKALECTHMSKVLDRVVSVEYALRDDDEKGDSYDSPRRGGYG 484
            VRIRRNFAFVQFETQEDATKALECT+MSK+LDRVVSVEYALRDD E+GD+YDSPRR G  
Sbjct: 121  VRIRRNFAFVQFETQEDATKALECTNMSKILDRVVSVEYALRDDGERGDNYDSPRRRGGY 180

Query: 483  XXXXXXXXXXXXPDYGHPRSPVYDRYNGPTYDRRRSPDYGRPRSLDYGRHRSPEYG 316
                        PDYG PRSPVYDRYNG   D RRSPDYGR RS DYGR RSP+YG
Sbjct: 181  ERSPSPYHRRPSPDYGRPRSPVYDRYNGGGPDMRRSPDYGRHRSPDYGRRRSPDYG 236


>gb|AFK41208.1| unknown [Medicago truncatula]
          Length = 249

 Score =  373 bits (958), Expect = e-101
 Identities = 187/238 (78%), Positives = 204/238 (85%), Gaps = 2/238 (0%)
 Frame = -2

Query: 1023 MRPVFVGNFEYDTRQSELERLFAKYGRIERVDMKSGYAFVYYEDEQDAEDAIRVLDNFPF 844
            MRPVF GN EYDTRQSELERLF+KYGRIERVDMKSG+AFVYYEDE+DAE+AIR LDN PF
Sbjct: 1    MRPVFAGNLEYDTRQSELERLFSKYGRIERVDMKSGFAFVYYEDERDAEEAIRALDNIPF 60

Query: 843  GYEKRRLSVEWARGERGRPRDGSRANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLH 664
            G++KRRLSVEWARGERGR RDGS+ NQ+PTKTLFVINFDPIRTRV DIERHF+PYG + H
Sbjct: 61   GHDKRRLSVEWARGERGRHRDGSKPNQKPTKTLFVINFDPIRTRVSDIERHFKPYGPLHH 120

Query: 663  VRIRRNFAFVQFETQEDATKALECTHMSKVLDRVVSVEYALRDDDEKGDSY-DSPRR-GG 490
            VRIRRNFAFVQ+ETQEDATKALECT+MSK+LDRVVSVEYALRDD ++ D+Y  SPRR GG
Sbjct: 121  VRIRRNFAFVQYETQEDATKALECTNMSKILDRVVSVEYALRDDSDRVDNYGGSPRRGGG 180

Query: 489  YGXXXXXXXXXXXXPDYGHPRSPVYDRYNGPTYDRRRSPDYGRPRSLDYGRHRSPEYG 316
                          PDYG PRSPVYDRY GP  DRRRSPDYGR RS DYGR+RSPEYG
Sbjct: 181  LARSPSPGYRRRPSPDYGRPRSPVYDRYTGP--DRRRSPDYGRNRSPDYGRNRSPEYG 236


>ref|XP_003627532.1| Arginine/serine-rich splicing factor [Medicago truncatula]
            gi|355521554|gb|AET02008.1| Arginine/serine-rich splicing
            factor [Medicago truncatula]
          Length = 301

 Score =  373 bits (958), Expect = e-101
 Identities = 187/238 (78%), Positives = 204/238 (85%), Gaps = 2/238 (0%)
 Frame = -2

Query: 1023 MRPVFVGNFEYDTRQSELERLFAKYGRIERVDMKSGYAFVYYEDEQDAEDAIRVLDNFPF 844
            MRPVF GN EYDTRQSELERLF+KYGRIERVDMKSG+AFVYYEDE+DAE+AIR LDN PF
Sbjct: 1    MRPVFAGNLEYDTRQSELERLFSKYGRIERVDMKSGFAFVYYEDERDAEEAIRALDNIPF 60

Query: 843  GYEKRRLSVEWARGERGRPRDGSRANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLH 664
            G++KRRLSVEWARGERGR RDGS+ NQ+PTKTLFVINFDPIRTRV DIERHF+PYG + H
Sbjct: 61   GHDKRRLSVEWARGERGRHRDGSKPNQKPTKTLFVINFDPIRTRVSDIERHFKPYGPLHH 120

Query: 663  VRIRRNFAFVQFETQEDATKALECTHMSKVLDRVVSVEYALRDDDEKGDSY-DSPRR-GG 490
            VRIRRNFAFVQ+ETQEDATKALECT+MSK+LDRVVSVEYALRDD ++ D+Y  SPRR GG
Sbjct: 121  VRIRRNFAFVQYETQEDATKALECTNMSKILDRVVSVEYALRDDSDRVDNYGGSPRRGGG 180

Query: 489  YGXXXXXXXXXXXXPDYGHPRSPVYDRYNGPTYDRRRSPDYGRPRSLDYGRHRSPEYG 316
                          PDYG PRSPVYDRY GP  DRRRSPDYGR RS DYGR+RSPEYG
Sbjct: 181  LARSPSPGYRRRPSPDYGRPRSPVYDRYTGP--DRRRSPDYGRNRSPDYGRNRSPEYG 236


Top