BLASTX nr result

ID: Glycyrrhiza24_contig00000948 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00000948
         (1193 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548264.1| PREDICTED: arginine/serine-rich-splicing fac...   417   e-114
ref|XP_003528779.1| PREDICTED: arginine/serine-rich-splicing fac...   409   e-112
gb|ACU23171.1| unknown [Glycine max]                                  407   e-111
ref|XP_003627532.1| Arginine/serine-rich splicing factor [Medica...   390   e-106
gb|AFK41208.1| unknown [Medicago truncatula]                          389   e-105

>ref|XP_003548264.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Glycine
           max]
          Length = 264

 Score =  417 bits (1073), Expect = e-114
 Identities = 204/244 (83%), Positives = 213/244 (87%), Gaps = 2/244 (0%)
 Frame = +2

Query: 20  MRPVFAGNLEYDTRQSELERLFSKYGRIERVDMKSGFAFVYYXXXXXXXXXXXXLDNVPF 199
           MRP+FAGNLEYDTRQSELERLFSKYGRI+RVDMKSGFAFVYY            LDNVPF
Sbjct: 1   MRPIFAGNLEYDTRQSELERLFSKYGRIDRVDMKSGFAFVYYEDERDAEEAIRALDNVPF 60

Query: 200 GYDKRRLSVEWARGERGRHRDGSKANQRPTKTLFVINFDPIRTRVRDIEKHFEPYGKIHH 379
           G++KRRLSVEWARGERGRHRDGSKANQ+PTKTLFVINFDPIRTRVRDIEKHFEPYG + H
Sbjct: 61  GHEKRRLSVEWARGERGRHRDGSKANQKPTKTLFVINFDPIRTRVRDIEKHFEPYGNVLH 120

Query: 380 VRIRRNFAFVQFETQEDATKALECTNMSKILDRVVSVEYALRDDSERGDNYDSPRRGGYE 559
           VRIRRNFAFVQFETQEDATKA+ECTNMSKILDRVVSVEYALRDD ERGDNYDSPRRGGYE
Sbjct: 121 VRIRRNFAFVQFETQEDATKAIECTNMSKILDRVVSVEYALRDDGERGDNYDSPRRGGYE 180

Query: 560 XXXXXXXXXXXXXDYGRPRSPVYDRYN--GPDRRRSPDYGRHRSPDYGRRRSPDYGRNRS 733
                        DYGRPRSPVYDRYN  GPDRRRSPDYGRHRSPDYGRRRSPDYGR +S
Sbjct: 181 -RSPSPYHRRPSPDYGRPRSPVYDRYNGGGPDRRRSPDYGRHRSPDYGRRRSPDYGRRKS 239

Query: 734 PEYG 745
           P+YG
Sbjct: 240 PDYG 243


>ref|XP_003528779.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Glycine
           max]
          Length = 259

 Score =  409 bits (1050), Expect = e-112
 Identities = 203/245 (82%), Positives = 211/245 (86%), Gaps = 3/245 (1%)
 Frame = +2

Query: 20  MRPVFAGNLEYDTRQSELERLFSKYGRIERVDMKSGFAFVYYXXXXXXXXXXXXLDNVPF 199
           MRP+FAGNLEYDTRQSELERLF+KYGRI+RVDMKSGFAFVYY            LDNVPF
Sbjct: 1   MRPIFAGNLEYDTRQSELERLFAKYGRIDRVDMKSGFAFVYYEDERDAEEAIRALDNVPF 60

Query: 200 GYDKRRLSVEWARGERGRHRDGSKANQRPTKTLFVINFDPIRTRVRDIEKHFEPYGKIHH 379
           G++KRRLSVEWARGERGRH DGSKANQ+PTKTLFVINFDPIRTRVRDIEKHFEPYG + H
Sbjct: 61  GHEKRRLSVEWARGERGRHHDGSKANQKPTKTLFVINFDPIRTRVRDIEKHFEPYGNVLH 120

Query: 380 VRIRRNFAFVQFETQEDATKALECTNMSKILDRVVSVEYALRDDSERGDNYDSP-RRGGY 556
           VRIRRNFAFVQFETQEDATKALECTNMSKILDRVVSVEYALRDD ERGDNYDSP RRGGY
Sbjct: 121 VRIRRNFAFVQFETQEDATKALECTNMSKILDRVVSVEYALRDDGERGDNYDSPRRRGGY 180

Query: 557 EXXXXXXXXXXXXXDYGRPRSPVYDRYN--GPDRRRSPDYGRHRSPDYGRRRSPDYGRNR 730
           E             DYGRPRSPVYDRYN  GPD RRSPDYGRHRSPDYGRRRSPDYG+ R
Sbjct: 181 E-RSPSPYHRRPSPDYGRPRSPVYDRYNGGGPDMRRSPDYGRHRSPDYGRRRSPDYGKPR 239

Query: 731 SPEYG 745
           SPEYG
Sbjct: 240 SPEYG 244


>gb|ACU23171.1| unknown [Glycine max]
          Length = 259

 Score =  407 bits (1046), Expect = e-111
 Identities = 202/245 (82%), Positives = 211/245 (86%), Gaps = 3/245 (1%)
 Frame = +2

Query: 20  MRPVFAGNLEYDTRQSELERLFSKYGRIERVDMKSGFAFVYYXXXXXXXXXXXXLDNVPF 199
           MRP+FAGNLEYDTRQSELERLF+KYGRI+RVDMKSGFAFV+Y            LDNVPF
Sbjct: 1   MRPIFAGNLEYDTRQSELERLFAKYGRIDRVDMKSGFAFVFYEDERDAEEAIRALDNVPF 60

Query: 200 GYDKRRLSVEWARGERGRHRDGSKANQRPTKTLFVINFDPIRTRVRDIEKHFEPYGKIHH 379
           G++KRRLSVEWARGERGRH DGSKANQ+PTKTLFVINFDPIRTRVRDIEKHFEPYG + H
Sbjct: 61  GHEKRRLSVEWARGERGRHHDGSKANQKPTKTLFVINFDPIRTRVRDIEKHFEPYGNVLH 120

Query: 380 VRIRRNFAFVQFETQEDATKALECTNMSKILDRVVSVEYALRDDSERGDNYDSP-RRGGY 556
           VRIRRNFAFVQFETQEDATKALECTNMSKILDRVVSVEYALRDD ERGDNYDSP RRGGY
Sbjct: 121 VRIRRNFAFVQFETQEDATKALECTNMSKILDRVVSVEYALRDDGERGDNYDSPRRRGGY 180

Query: 557 EXXXXXXXXXXXXXDYGRPRSPVYDRYN--GPDRRRSPDYGRHRSPDYGRRRSPDYGRNR 730
           E             DYGRPRSPVYDRYN  GPD RRSPDYGRHRSPDYGRRRSPDYG+ R
Sbjct: 181 E-RSPSPYHRRPSPDYGRPRSPVYDRYNGGGPDMRRSPDYGRHRSPDYGRRRSPDYGKPR 239

Query: 731 SPEYG 745
           SPEYG
Sbjct: 240 SPEYG 244


>ref|XP_003627532.1| Arginine/serine-rich splicing factor [Medicago truncatula]
           gi|355521554|gb|AET02008.1| Arginine/serine-rich
           splicing factor [Medicago truncatula]
          Length = 301

 Score =  390 bits (1003), Expect = e-106
 Identities = 204/307 (66%), Positives = 221/307 (71%), Gaps = 2/307 (0%)
 Frame = +2

Query: 20  MRPVFAGNLEYDTRQSELERLFSKYGRIERVDMKSGFAFVYYXXXXXXXXXXXXLDNVPF 199
           MRPVFAGNLEYDTRQSELERLFSKYGRIERVDMKSGFAFVYY            LDN+PF
Sbjct: 1   MRPVFAGNLEYDTRQSELERLFSKYGRIERVDMKSGFAFVYYEDERDAEEAIRALDNIPF 60

Query: 200 GYDKRRLSVEWARGERGRHRDGSKANQRPTKTLFVINFDPIRTRVRDIEKHFEPYGKIHH 379
           G+DKRRLSVEWARGERGRHRDGSK NQ+PTKTLFVINFDPIRTRV DIE+HF+PYG +HH
Sbjct: 61  GHDKRRLSVEWARGERGRHRDGSKPNQKPTKTLFVINFDPIRTRVSDIERHFKPYGPLHH 120

Query: 380 VRIRRNFAFVQFETQEDATKALECTNMSKILDRVVSVEYALRDDSERGDNY-DSPRR-GG 553
           VRIRRNFAFVQ+ETQEDATKALECTNMSKILDRVVSVEYALRDDS+R DNY  SPRR GG
Sbjct: 121 VRIRRNFAFVQYETQEDATKALECTNMSKILDRVVSVEYALRDDSDRVDNYGGSPRRGGG 180

Query: 554 YEXXXXXXXXXXXXXDYGRPRSPVYDRYNGPDRRRSPDYGRHRSPDYGRRRSPDYGRNRS 733
                          DYGRPRSPVYDRY GPDRRRSPDYGR+RSPDYGR RSP+YGR R 
Sbjct: 181 LARSPSPGYRRRPSPDYGRPRSPVYDRYTGPDRRRSPDYGRNRSPDYGRNRSPEYGRYR- 239

Query: 734 PEYGXXXXXXXXXXXXT*AMSGFWSKMQVCGGTLLLSGC*NSK*DIMY*IVLFGLVWFVS 913
             Y                +   W  +                  +++ ++  GLVWF S
Sbjct: 240 -RYFVHQSLQWHFITTVLMLESVWYIVTYL--------------RVLFRLMWIGLVWFAS 284

Query: 914 LLFSSQC 934
           LL S  C
Sbjct: 285 LLCSIHC 291


>gb|AFK41208.1| unknown [Medicago truncatula]
          Length = 249

 Score =  389 bits (998), Expect = e-105
 Identities = 193/240 (80%), Positives = 203/240 (84%), Gaps = 2/240 (0%)
 Frame = +2

Query: 20  MRPVFAGNLEYDTRQSELERLFSKYGRIERVDMKSGFAFVYYXXXXXXXXXXXXLDNVPF 199
           MRPVFAGNLEYDTRQSELERLFSKYGRIERVDMKSGFAFVYY            LDN+PF
Sbjct: 1   MRPVFAGNLEYDTRQSELERLFSKYGRIERVDMKSGFAFVYYEDERDAEEAIRALDNIPF 60

Query: 200 GYDKRRLSVEWARGERGRHRDGSKANQRPTKTLFVINFDPIRTRVRDIEKHFEPYGKIHH 379
           G+DKRRLSVEWARGERGRHRDGSK NQ+PTKTLFVINFDPIRTRV DIE+HF+PYG +HH
Sbjct: 61  GHDKRRLSVEWARGERGRHRDGSKPNQKPTKTLFVINFDPIRTRVSDIERHFKPYGPLHH 120

Query: 380 VRIRRNFAFVQFETQEDATKALECTNMSKILDRVVSVEYALRDDSERGDNY-DSPRR-GG 553
           VRIRRNFAFVQ+ETQEDATKALECTNMSKILDRVVSVEYALRDDS+R DNY  SPRR GG
Sbjct: 121 VRIRRNFAFVQYETQEDATKALECTNMSKILDRVVSVEYALRDDSDRVDNYGGSPRRGGG 180

Query: 554 YEXXXXXXXXXXXXXDYGRPRSPVYDRYNGPDRRRSPDYGRHRSPDYGRRRSPDYGRNRS 733
                          DYGRPRSPVYDRY GPDRRRSPDYGR+RSPDYGR RSP+YGR RS
Sbjct: 181 LARSPSPGYRRRPSPDYGRPRSPVYDRYTGPDRRRSPDYGRNRSPDYGRNRSPEYGRYRS 240


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