BLASTX nr result

ID: Glycyrrhiza24_contig00000933 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00000933
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520093.1| PREDICTED: pentatricopeptide repeat-containi...   158   4e-37
gb|ACU21153.1| unknown [Glycine max]                                  155   2e-36
ref|XP_003629226.1| Pentatricopeptide repeat-containing protein ...   153   1e-35
emb|CBI24452.3| unnamed protein product [Vitis vinifera]              134   6e-30
ref|XP_004146207.1| PREDICTED: pentatricopeptide repeat-containi...   124   6e-27

>ref|XP_003520093.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Glycine max]
          Length = 503

 Score =  158 bits (400), Expect = 4e-37
 Identities = 75/86 (87%), Positives = 84/86 (97%)
 Frame = -1

Query: 259 MGRAGDLEKAVDFIQSMPIQPEKNVYGALLGACRIHKNIELAELAAEKLFILDPNNAGRY 80
           +GRAGDLEKAV+FIQSMPIQP KN+YGALLGACRIHKN+ELAELAAEKLF+LDP+NAGRY
Sbjct: 367 LGRAGDLEKAVEFIQSMPIQPGKNIYGALLGACRIHKNMELAELAAEKLFVLDPDNAGRY 426

Query: 79  VILAQMYEDAGRWQDAARVRKVIREK 2
           VILAQMYEDA RWQDAARVRKV+++K
Sbjct: 427 VILAQMYEDAERWQDAARVRKVVKDK 452


>gb|ACU21153.1| unknown [Glycine max]
          Length = 529

 Score =  155 bits (393), Expect = 2e-36
 Identities = 74/86 (86%), Positives = 83/86 (96%)
 Frame = -1

Query: 259 MGRAGDLEKAVDFIQSMPIQPEKNVYGALLGACRIHKNIELAELAAEKLFILDPNNAGRY 80
           +GRAGDLEKAV+FIQSMPIQP KN+YGALLGACRIHKN+ELAELAAEKLF+LDP+NAGRY
Sbjct: 367 LGRAGDLEKAVEFIQSMPIQPGKNIYGALLGACRIHKNMELAELAAEKLFVLDPDNAGRY 426

Query: 79  VILAQMYEDAGRWQDAARVRKVIREK 2
           VILAQMYEDA RW DAARVRKV+++K
Sbjct: 427 VILAQMYEDAERWLDAARVRKVVKDK 452


>ref|XP_003629226.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355523248|gb|AET03702.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 510

 Score =  153 bits (387), Expect = 1e-35
 Identities = 74/86 (86%), Positives = 82/86 (95%)
 Frame = -1

Query: 259 MGRAGDLEKAVDFIQSMPIQPEKNVYGALLGACRIHKNIELAELAAEKLFILDPNNAGRY 80
           +GRAG+LEKA++ IQSMPIQP KNVYGALLGA RIHKNIELAELAAEKLF+LDPNNAGRY
Sbjct: 369 LGRAGNLEKAMELIQSMPIQPGKNVYGALLGASRIHKNIELAELAAEKLFVLDPNNAGRY 428

Query: 79  VILAQMYEDAGRWQDAARVRKVIREK 2
           VILAQMYED GRW+DAAR+RK+IREK
Sbjct: 429 VILAQMYEDEGRWKDAARLRKIIREK 454


>emb|CBI24452.3| unnamed protein product [Vitis vinifera]
          Length = 503

 Score =  134 bits (338), Expect = 6e-30
 Identities = 60/86 (69%), Positives = 78/86 (90%)
 Frame = -1

Query: 259 MGRAGDLEKAVDFIQSMPIQPEKNVYGALLGACRIHKNIELAELAAEKLFILDPNNAGRY 80
           +GRAG L +AV+F+++MP+QP K+VYGALLGACRIH NIELAE  AEKLF+LDP+NAGRY
Sbjct: 358 LGRAGFLHEAVEFVKNMPVQPGKDVYGALLGACRIHNNIELAEEIAEKLFVLDPDNAGRY 417

Query: 79  VILAQMYEDAGRWQDAARVRKVIREK 2
           +IL +MYEDAG+W++AAR+RK ++EK
Sbjct: 418 IILVKMYEDAGKWENAARLRKALKEK 443


>ref|XP_004146207.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 480

 Score =  124 bits (312), Expect = 6e-27
 Identities = 57/86 (66%), Positives = 73/86 (84%)
 Frame = -1

Query: 259 MGRAGDLEKAVDFIQSMPIQPEKNVYGALLGACRIHKNIELAELAAEKLFILDPNNAGRY 80
           +GRAG LE+AV+FI+ MP+Q  K+VYGALLGACRIH N+ELA+   EKLFILDP  A RY
Sbjct: 344 LGRAGFLEQAVEFIEGMPVQAGKDVYGALLGACRIHNNLELAKEVGEKLFILDPEKASRY 403

Query: 79  VILAQMYEDAGRWQDAARVRKVIREK 2
           V LA MYEDAG+W+DAA++RK++R++
Sbjct: 404 VTLATMYEDAGQWEDAAKLRKLLRDR 429