BLASTX nr result
ID: Glycyrrhiza24_contig00000932
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00000932 (292 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003520093.1| PREDICTED: pentatricopeptide repeat-containi... 169 3e-40 ref|XP_003629226.1| Pentatricopeptide repeat-containing protein ... 169 3e-40 gb|ACU21153.1| unknown [Glycine max] 169 3e-40 ref|XP_004146207.1| PREDICTED: pentatricopeptide repeat-containi... 137 7e-31 emb|CBI24452.3| unnamed protein product [Vitis vinifera] 137 9e-31 >ref|XP_003520093.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like [Glycine max] Length = 503 Score = 169 bits (427), Expect = 3e-40 Identities = 76/97 (78%), Positives = 90/97 (92%) Frame = +1 Query: 1 ARAVFDQISDRNIIVWNAIIRCYGTHGLAREALSMFRQLVESGLCPDGIVFLCLLSACSH 180 ARA+FD+ISDR++IVW+AIIRCYGTHGLA+EAL++FRQLV +GL PDG+VFLCLLSACSH Sbjct: 275 ARAIFDRISDRSVIVWSAIIRCYGTHGLAQEALALFRQLVGAGLRPDGVVFLCLLSACSH 334 Query: 181 AGMLAQGWNLFQTMETYGVVKGEAHYACMVDLMGRAG 291 AG+L QGW+LF METYGV K EAHYAC+VDL+GRAG Sbjct: 335 AGLLEQGWHLFNAMETYGVAKSEAHYACIVDLLGRAG 371 >ref|XP_003629226.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|355523248|gb|AET03702.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 510 Score = 169 bits (427), Expect = 3e-40 Identities = 81/97 (83%), Positives = 88/97 (90%) Frame = +1 Query: 1 ARAVFDQISDRNIIVWNAIIRCYGTHGLAREALSMFRQLVESGLCPDGIVFLCLLSACSH 180 A+AVFDQI DRN+IVW+AIIRCYG HG A+EALSMFRQLVE GL DGIVFL LLSACSH Sbjct: 277 AKAVFDQIPDRNVIVWSAIIRCYGMHGFAQEALSMFRQLVELGLHLDGIVFLSLLSACSH 336 Query: 181 AGMLAQGWNLFQTMETYGVVKGEAHYACMVDLMGRAG 291 AGM +GW+LFQTMETYGVVKGEAHYACMVDL+GRAG Sbjct: 337 AGMHEEGWHLFQTMETYGVVKGEAHYACMVDLLGRAG 373 >gb|ACU21153.1| unknown [Glycine max] Length = 529 Score = 169 bits (427), Expect = 3e-40 Identities = 76/97 (78%), Positives = 90/97 (92%) Frame = +1 Query: 1 ARAVFDQISDRNIIVWNAIIRCYGTHGLAREALSMFRQLVESGLCPDGIVFLCLLSACSH 180 ARA+FD+ISDR++IVW+AIIRCYGTHGLA+EAL++FRQLV +GL PDG+VFLCLLSACSH Sbjct: 275 ARAIFDRISDRSVIVWSAIIRCYGTHGLAQEALALFRQLVGAGLRPDGVVFLCLLSACSH 334 Query: 181 AGMLAQGWNLFQTMETYGVVKGEAHYACMVDLMGRAG 291 AG+L QGW+LF METYGV K EAHYAC+VDL+GRAG Sbjct: 335 AGLLEQGWHLFNAMETYGVAKSEAHYACIVDLLGRAG 371 >ref|XP_004146207.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like [Cucumis sativus] Length = 480 Score = 137 bits (346), Expect = 7e-31 Identities = 61/97 (62%), Positives = 81/97 (83%) Frame = +1 Query: 1 ARAVFDQISDRNIIVWNAIIRCYGTHGLAREALSMFRQLVESGLCPDGIVFLCLLSACSH 180 AR VFD+I D+N+IVW+AIIRCYG HG A EA +MFR+L E+G+ PDG++FL LLSACSH Sbjct: 252 ARDVFDRIDDKNVIVWSAIIRCYGMHGFADEAFNMFRRLEEAGVKPDGLIFLNLLSACSH 311 Query: 181 AGMLAQGWNLFQTMETYGVVKGEAHYACMVDLMGRAG 291 AG++A+G +++ ME YG+ + + HYACMVDL+GRAG Sbjct: 312 AGLVAKGHEIYEKMEAYGLERKDNHYACMVDLLGRAG 348 >emb|CBI24452.3| unnamed protein product [Vitis vinifera] Length = 503 Score = 137 bits (345), Expect = 9e-31 Identities = 64/97 (65%), Positives = 77/97 (79%) Frame = +1 Query: 1 ARAVFDQISDRNIIVWNAIIRCYGTHGLAREALSMFRQLVESGLCPDGIVFLCLLSACSH 180 AR VFD+I D+NI+VWNAIIRCYG HG A EAL MF L++SGL PDG++FLCLLSA SH Sbjct: 266 ARDVFDRIDDKNIVVWNAIIRCYGMHGHADEALKMFSGLIDSGLHPDGVIFLCLLSAFSH 325 Query: 181 AGMLAQGWNLFQTMETYGVVKGEAHYACMVDLMGRAG 291 AGM+A+G LF+ M YGV K HYA +VD++GRAG Sbjct: 326 AGMVAEGMELFEKMGDYGVEKSSEHYASVVDILGRAG 362