BLASTX nr result

ID: Glycyrrhiza24_contig00000932 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00000932
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520093.1| PREDICTED: pentatricopeptide repeat-containi...   169   3e-40
ref|XP_003629226.1| Pentatricopeptide repeat-containing protein ...   169   3e-40
gb|ACU21153.1| unknown [Glycine max]                                  169   3e-40
ref|XP_004146207.1| PREDICTED: pentatricopeptide repeat-containi...   137   7e-31
emb|CBI24452.3| unnamed protein product [Vitis vinifera]              137   9e-31

>ref|XP_003520093.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Glycine max]
          Length = 503

 Score =  169 bits (427), Expect = 3e-40
 Identities = 76/97 (78%), Positives = 90/97 (92%)
 Frame = +1

Query: 1   ARAVFDQISDRNIIVWNAIIRCYGTHGLAREALSMFRQLVESGLCPDGIVFLCLLSACSH 180
           ARA+FD+ISDR++IVW+AIIRCYGTHGLA+EAL++FRQLV +GL PDG+VFLCLLSACSH
Sbjct: 275 ARAIFDRISDRSVIVWSAIIRCYGTHGLAQEALALFRQLVGAGLRPDGVVFLCLLSACSH 334

Query: 181 AGMLAQGWNLFQTMETYGVVKGEAHYACMVDLMGRAG 291
           AG+L QGW+LF  METYGV K EAHYAC+VDL+GRAG
Sbjct: 335 AGLLEQGWHLFNAMETYGVAKSEAHYACIVDLLGRAG 371


>ref|XP_003629226.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355523248|gb|AET03702.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 510

 Score =  169 bits (427), Expect = 3e-40
 Identities = 81/97 (83%), Positives = 88/97 (90%)
 Frame = +1

Query: 1   ARAVFDQISDRNIIVWNAIIRCYGTHGLAREALSMFRQLVESGLCPDGIVFLCLLSACSH 180
           A+AVFDQI DRN+IVW+AIIRCYG HG A+EALSMFRQLVE GL  DGIVFL LLSACSH
Sbjct: 277 AKAVFDQIPDRNVIVWSAIIRCYGMHGFAQEALSMFRQLVELGLHLDGIVFLSLLSACSH 336

Query: 181 AGMLAQGWNLFQTMETYGVVKGEAHYACMVDLMGRAG 291
           AGM  +GW+LFQTMETYGVVKGEAHYACMVDL+GRAG
Sbjct: 337 AGMHEEGWHLFQTMETYGVVKGEAHYACMVDLLGRAG 373


>gb|ACU21153.1| unknown [Glycine max]
          Length = 529

 Score =  169 bits (427), Expect = 3e-40
 Identities = 76/97 (78%), Positives = 90/97 (92%)
 Frame = +1

Query: 1   ARAVFDQISDRNIIVWNAIIRCYGTHGLAREALSMFRQLVESGLCPDGIVFLCLLSACSH 180
           ARA+FD+ISDR++IVW+AIIRCYGTHGLA+EAL++FRQLV +GL PDG+VFLCLLSACSH
Sbjct: 275 ARAIFDRISDRSVIVWSAIIRCYGTHGLAQEALALFRQLVGAGLRPDGVVFLCLLSACSH 334

Query: 181 AGMLAQGWNLFQTMETYGVVKGEAHYACMVDLMGRAG 291
           AG+L QGW+LF  METYGV K EAHYAC+VDL+GRAG
Sbjct: 335 AGLLEQGWHLFNAMETYGVAKSEAHYACIVDLLGRAG 371


>ref|XP_004146207.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 480

 Score =  137 bits (346), Expect = 7e-31
 Identities = 61/97 (62%), Positives = 81/97 (83%)
 Frame = +1

Query: 1   ARAVFDQISDRNIIVWNAIIRCYGTHGLAREALSMFRQLVESGLCPDGIVFLCLLSACSH 180
           AR VFD+I D+N+IVW+AIIRCYG HG A EA +MFR+L E+G+ PDG++FL LLSACSH
Sbjct: 252 ARDVFDRIDDKNVIVWSAIIRCYGMHGFADEAFNMFRRLEEAGVKPDGLIFLNLLSACSH 311

Query: 181 AGMLAQGWNLFQTMETYGVVKGEAHYACMVDLMGRAG 291
           AG++A+G  +++ ME YG+ + + HYACMVDL+GRAG
Sbjct: 312 AGLVAKGHEIYEKMEAYGLERKDNHYACMVDLLGRAG 348


>emb|CBI24452.3| unnamed protein product [Vitis vinifera]
          Length = 503

 Score =  137 bits (345), Expect = 9e-31
 Identities = 64/97 (65%), Positives = 77/97 (79%)
 Frame = +1

Query: 1   ARAVFDQISDRNIIVWNAIIRCYGTHGLAREALSMFRQLVESGLCPDGIVFLCLLSACSH 180
           AR VFD+I D+NI+VWNAIIRCYG HG A EAL MF  L++SGL PDG++FLCLLSA SH
Sbjct: 266 ARDVFDRIDDKNIVVWNAIIRCYGMHGHADEALKMFSGLIDSGLHPDGVIFLCLLSAFSH 325

Query: 181 AGMLAQGWNLFQTMETYGVVKGEAHYACMVDLMGRAG 291
           AGM+A+G  LF+ M  YGV K   HYA +VD++GRAG
Sbjct: 326 AGMVAEGMELFEKMGDYGVEKSSEHYASVVDILGRAG 362


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