BLASTX nr result

ID: Glycyrrhiza24_contig00000917 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00000917
         (1069 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553635.1| PREDICTED: uncharacterized protein LOC100799...   326   5e-87
ref|XP_003638105.1| Pre-mRNA-splicing factor rse1 [Medicago trun...   326   5e-87
ref|XP_003521514.1| PREDICTED: uncharacterized protein LOC100806...   306   4e-81
ref|XP_004136549.1| PREDICTED: pre-mRNA-splicing factor RSE1-lik...   263   4e-68
emb|CBI29964.3| unnamed protein product [Vitis vinifera]              253   6e-65

>ref|XP_003553635.1| PREDICTED: uncharacterized protein LOC100799711 [Glycine max]
          Length = 1258

 Score =  326 bits (836), Expect = 5e-87
 Identities = 167/191 (87%), Positives = 176/191 (92%), Gaps = 1/191 (0%)
 Frame = +2

Query: 2    VVSDRKGSIAVLCSDHLEDNASPECNLTLSCAYFMAEVAMRIWKGSYSYRLPADDVLPGG 181
            VVSDRKGSIAVLCSDHLEDNA  +CN+TLSCAYFMAE+AM I KGSYSYRLPADDVL GG
Sbjct: 1068 VVSDRKGSIAVLCSDHLEDNAGAQCNMTLSCAYFMAEIAMSIKKGSYSYRLPADDVLEGG 1127

Query: 182  NGPKTNVDSLQNTIIASTLLGSIMTFIPLSRDEYELLEALQARLVLHHLTAPVLGNDHNE 361
            NGPKTNVDSLQNTIIASTLLGSIM FIPLSR+EYELLE +QARLV+HHLTAPVLGNDH+E
Sbjct: 1128 NGPKTNVDSLQNTIIASTLLGSIMIFIPLSREEYELLEVVQARLVVHHLTAPVLGNDHHE 1187

Query: 362  FRSRENPVGVPKILDGDMLTQFLELTSMQQNAILSLEPPDMVKPSLKPILPK-FSVNQVV 538
            FRSREN VGVPKILDGD+LTQFLELTSMQQ  ILSLE PDMVKPSLKP+LP   SVNQVV
Sbjct: 1188 FRSRENRVGVPKILDGDILTQFLELTSMQQKMILSLEQPDMVKPSLKPLLPSHVSVNQVV 1247

Query: 539  QLLERVHYALN 571
            QLLERVH ALN
Sbjct: 1248 QLLERVHDALN 1258


>ref|XP_003638105.1| Pre-mRNA-splicing factor rse1 [Medicago truncatula]
            gi|355504040|gb|AES85243.1| Pre-mRNA-splicing factor rse1
            [Medicago truncatula]
          Length = 1370

 Score =  326 bits (836), Expect = 5e-87
 Identities = 164/192 (85%), Positives = 178/192 (92%), Gaps = 2/192 (1%)
 Frame = +2

Query: 2    VVSDRKGSIAVLCSDHLE--DNASPECNLTLSCAYFMAEVAMRIWKGSYSYRLPADDVLP 175
            +VSDRKGSIAVLCSDHLE  +NAS ECNL LSCAYFMAE+A+ I KGSYSYRLPADD+L 
Sbjct: 1179 IVSDRKGSIAVLCSDHLEAPNNASTECNLRLSCAYFMAEIAVSIRKGSYSYRLPADDLLS 1238

Query: 176  GGNGPKTNVDSLQNTIIASTLLGSIMTFIPLSRDEYELLEALQARLVLHHLTAPVLGNDH 355
            GG GPKTNVDSLQNTI+ STLLGSIM FIPLSR+EYELLEA+QARL +HHLTAPVLGNDH
Sbjct: 1239 GGIGPKTNVDSLQNTILVSTLLGSIMIFIPLSREEYELLEAVQARLAVHHLTAPVLGNDH 1298

Query: 356  NEFRSRENPVGVPKILDGDMLTQFLELTSMQQNAILSLEPPDMVKPSLKPILPKFSVNQV 535
            NEFRSRENPVG PKILDGDMLTQFLELT+MQQN ILS+EP D+VKPSLKP+LP+FSVNQV
Sbjct: 1299 NEFRSRENPVGTPKILDGDMLTQFLELTNMQQNNILSMEPLDVVKPSLKPLLPQFSVNQV 1358

Query: 536  VQLLERVHYALN 571
            VQLLERVHYALN
Sbjct: 1359 VQLLERVHYALN 1370


>ref|XP_003521514.1| PREDICTED: uncharacterized protein LOC100806799 [Glycine max]
          Length = 1278

 Score =  306 bits (785), Expect = 4e-81
 Identities = 156/178 (87%), Positives = 164/178 (92%), Gaps = 1/178 (0%)
 Frame = +2

Query: 2    VVSDRKGSIAVLCSDHLEDNASPECNLTLSCAYFMAEVAMRIWKGSYSYRLPADDVLPGG 181
            VVSDRKGSIAVLCSDHLEDNA  +CN+ LSCAYFMAE+AM I KGSYSYRLPADDVL GG
Sbjct: 1074 VVSDRKGSIAVLCSDHLEDNAGAQCNMALSCAYFMAEIAMSIKKGSYSYRLPADDVLQGG 1133

Query: 182  NGPKTNVDSLQNTIIASTLLGSIMTFIPLSRDEYELLEALQARLVLHHLTAPVLGNDHNE 361
            NGPKTNVDSLQNTIIA+TLLGSIM FIPLSR+EYELLEA+QARLV+HHLTAPVLGNDHNE
Sbjct: 1134 NGPKTNVDSLQNTIIATTLLGSIMIFIPLSREEYELLEAVQARLVVHHLTAPVLGNDHNE 1193

Query: 362  FRSRENPVGVPKILDGDMLTQFLELTSMQQNAILSLEPPDMVKPSLKPILPK-FSVNQ 532
            FRSREN VGVPKILDGDMLTQFLELTSMQQ  ILSLE PDMVKPSLKP+LP   SVNQ
Sbjct: 1194 FRSRENRVGVPKILDGDMLTQFLELTSMQQKMILSLELPDMVKPSLKPLLPSHVSVNQ 1251


>ref|XP_004136549.1| PREDICTED: pre-mRNA-splicing factor RSE1-like [Cucumis sativus]
          Length = 1376

 Score =  263 bits (673), Expect = 4e-68
 Identities = 135/193 (69%), Positives = 159/193 (82%), Gaps = 3/193 (1%)
 Frame = +2

Query: 2    VVSDRKGSIAVL-CSDHLEDNASPECNLTLSCAYFMAEVAMRIWKGSYSYRLPADDVLPG 178
            VVSDRKGSIA+L CSD LEDNASPECNLTL+CAY+M E+AM + KGS+SY+LPADD+L G
Sbjct: 1184 VVSDRKGSIAILSCSDRLEDNASPECNLTLNCAYYMGEIAMTLRKGSFSYKLPADDLLRG 1243

Query: 179  GNGPKTNVDSLQNTIIASTLLGSIMTFIPLSRDEYELLEALQARLVLHHLTAPVLGNDHN 358
               P ++ DS  NTIIASTLLGSI+ F PLSRDEYELLEA+QA+L +H LT+P+LGNDH 
Sbjct: 1244 CAVPGSDFDSSHNTIIASTLLGSIVIFTPLSRDEYELLEAVQAKLAVHPLTSPILGNDHY 1303

Query: 359  EFRSRENPVGVPKILDGDMLTQFLELTSMQQNAILSLEPPDM--VKPSLKPILPKFSVNQ 532
            E+RSRENP+GVPKILDGD+LTQFLELTSMQQ  +LS     +  VKPS K +     +NQ
Sbjct: 1304 EYRSRENPIGVPKILDGDILTQFLELTSMQQELVLSSSVGSLSAVKPSSKSMPASIPINQ 1363

Query: 533  VVQLLERVHYALN 571
            VVQLLER+HYALN
Sbjct: 1364 VVQLLERIHYALN 1376


>emb|CBI29964.3| unnamed protein product [Vitis vinifera]
          Length = 1363

 Score =  253 bits (646), Expect = 6e-65
 Identities = 134/197 (68%), Positives = 159/197 (80%), Gaps = 7/197 (3%)
 Frame = +2

Query: 2    VVSDRKGSIAVL-CSDHLEDNASPECNLTLSCAYFMAEVAMRIWKGSYSYRLPADDVLPG 178
            VVSDRKGSIAVL CS+HLEDNASPECNLTL+C+Y+M E+AM I KGS+SY+LPADDVL G
Sbjct: 1167 VVSDRKGSIAVLSCSNHLEDNASPECNLTLNCSYYMGEIAMSIKKGSFSYKLPADDVLKG 1226

Query: 179  GNGPKTNVDSLQNTIIASTLLGSIMTFIPLSRDEYELLEALQARLVLHHLTAPVLGNDHN 358
             +G  T +D  +N+I+A TLLGSI+  IP+SR+E+ELLEA+QARL +H LTAP+LGNDHN
Sbjct: 1227 CDGSNTIIDFSENSIMAGTLLGSIIMLIPISREEHELLEAVQARLAVHQLTAPILGNDHN 1286

Query: 359  EFRSRENPV---GVPKILDGDMLTQFLELTSMQQNAILSL---EPPDMVKPSLKPILPKF 520
            EFRSREN V   GV KILDGDML QFLELTSMQQ A+L+L       +   S + +L   
Sbjct: 1287 EFRSRENSVRKAGVSKILDGDMLAQFLELTSMQQEAVLALPLGSLETVTSSSKQTLLSPI 1346

Query: 521  SVNQVVQLLERVHYALN 571
            SVN+VVQLLERVHYALN
Sbjct: 1347 SVNRVVQLLERVHYALN 1363


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