BLASTX nr result

ID: Glycyrrhiza24_contig00000886 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00000886
         (1842 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531612.1| PREDICTED: putative F-box/FBD/LRR-repeat pro...   697   0.0  
ref|XP_003529796.1| PREDICTED: putative F-box/FBD/LRR-repeat pro...   687   0.0  
ref|XP_003627116.1| F-box/LRR-repeat protein [Medicago truncatul...   683   0.0  
gb|ABD28502.1| Cyclin-like F-box [Medicago truncatula]                491   e-136
ref|XP_003597596.1| Polygalacturonase [Medicago truncatula] gi|3...   490   e-136

>ref|XP_003531612.1| PREDICTED: putative F-box/FBD/LRR-repeat protein At1g78840-like
            [Glycine max]
          Length = 450

 Score =  697 bits (1799), Expect = 0.0
 Identities = 343/449 (76%), Positives = 378/449 (84%), Gaps = 7/449 (1%)
 Frame = +3

Query: 279  GNMIDGFNRIDSIKCCEA--RKTGFQESGPVMKKSKNAILASQNVDNCIVAESQGRLDDM 452
            GNM   FN+ DS++CCEA  +K   QESGP +KKSK  ILASQNVDNC + ES+ RL DM
Sbjct: 2    GNMSCSFNQTDSVECCEAEIQKADSQESGPPLKKSKTEILASQNVDNCEMEESEDRLSDM 61

Query: 453  PDCLIHHILSFMETKDAVRTCVLSKRWRYLWTSIPCLNFSSKSFTRLVDFKKFVLWVLSH 632
            PDC+IHHILSFMETKDA++TCVLSKRWRYLW S+PCLNFSSKSF RLVDFKKFVLWVL+H
Sbjct: 62   PDCIIHHILSFMETKDAIQTCVLSKRWRYLWASVPCLNFSSKSFMRLVDFKKFVLWVLNH 121

Query: 633  RDSSHVKFLVYYRFGVDYATDQYLLNKVIEYATSHGVEEIRINLRAKT----SGSPPVEI 800
            RDSSHVK LVYYRFGVDYATDQ LLNKVIEYA SHGVEEI+INLRAKT    SGSPPVEI
Sbjct: 122  RDSSHVKLLVYYRFGVDYATDQGLLNKVIEYAASHGVEEIKINLRAKTAGRTSGSPPVEI 181

Query: 801  PLSLFSCQSLKRLELKDCHPTNATIPL-GCKSLDVLHLEHFTMYPTAADFSNPXXXXXXX 977
            P SLF+CQSLK+LELKDCHPTN +  L GCKSLD+LHLE F+M+P AADFSNP       
Sbjct: 182  PFSLFTCQSLKKLELKDCHPTNGSSSLLGCKSLDILHLEQFSMHPVAADFSNPFASLAEL 241

Query: 978  XXXXXXXXXXXXXXXXCYTGINCLDPFANCVNLKNLHLSEMSFKSDLNPKDFVISAPQLC 1157
                            CYTG +CLDPFANCV+LKNLHLSEMSFKSDLNPKDFVISAP+L 
Sbjct: 242  FGFTTLTTLHLNNFILCYTGTDCLDPFANCVHLKNLHLSEMSFKSDLNPKDFVISAPKLS 301

Query: 1158 NLSLMCNRFRCKIVVAAPRLTNFTYLYSTPCAFFEFSLPSLDGLVIDIHESHDRLEKPHR 1337
            NL+LMCNRF+CKIVVAAP+L+NF YLYSTPCAFFEF LPS+DGLVIDIHE HDRLEK  R
Sbjct: 302  NLNLMCNRFKCKIVVAAPQLSNFIYLYSTPCAFFEFRLPSMDGLVIDIHEPHDRLEKCRR 361

Query: 1338 KKREETLHGLINMLRGRQKAEAVKLSFCTVAVTCGNAASIKPECLSYSKLKSLNFGVGST 1517
            +K+EETLHGLINML+G   AEAVKLSFCTV VTCG +A +KP CL  +KLKSLNFGVGST
Sbjct: 362  RKKEETLHGLINMLQGHHNAEAVKLSFCTVKVTCGASALVKPACLPSTKLKSLNFGVGST 421

Query: 1518 YKIFINNLDHITAYFRDCSQHADFEILTV 1604
            YKIFINNLDHITAYFR+CSQHADFEI+TV
Sbjct: 422  YKIFINNLDHITAYFRNCSQHADFEIVTV 450


>ref|XP_003529796.1| PREDICTED: putative F-box/FBD/LRR-repeat protein At1g78840-like
            [Glycine max]
          Length = 449

 Score =  687 bits (1774), Expect = 0.0
 Identities = 339/448 (75%), Positives = 372/448 (83%), Gaps = 6/448 (1%)
 Frame = +3

Query: 279  GNMIDGFNRIDSIKCCEA--RKTGFQESGPVMKKSKNAILASQNVDNCIVAESQGRLDDM 452
            GNM   FN+ DSI+CCEA  +K   QESGP +KKSK  ILASQNVDNC + ESQ RL DM
Sbjct: 2    GNMTCSFNKTDSIECCEAEMQKADSQESGPALKKSKTKILASQNVDNCEMEESQDRLSDM 61

Query: 453  PDCLIHHILSFMETKDAVRTCVLSKRWRYLWTSIPCLNFSSKSFTRLVDFKKFVLWVLSH 632
            PDCLIHHILSFMETKDA++TCVLSKRWRYLW S+PCL+FSSKSF RLV+FKKFVLWVL+H
Sbjct: 62   PDCLIHHILSFMETKDAIQTCVLSKRWRYLWASVPCLSFSSKSFMRLVNFKKFVLWVLNH 121

Query: 633  RDSSHVKFLVYYRFGVDYATDQYLLNKVIEYATSHGVEEIRINLRAKT----SGSPPVEI 800
            RDSSHVK LVYYRFGVDY TDQ LLNKVIEYA SHGVEEI+INLRAKT    SGSPPVEI
Sbjct: 122  RDSSHVKLLVYYRFGVDYTTDQGLLNKVIEYAASHGVEEIKINLRAKTAGRTSGSPPVEI 181

Query: 801  PLSLFSCQSLKRLELKDCHPTNATIPLGCKSLDVLHLEHFTMYPTAADFSNPXXXXXXXX 980
            PLSLF+CQSLK+LEL DCHPTN + PLGC SLD+LHLE F+M+P AADFSNP        
Sbjct: 182  PLSLFTCQSLKKLELTDCHPTNGSSPLGCTSLDMLHLEQFSMHPAAADFSNPFASLAELF 241

Query: 981  XXXXXXXXXXXXXXXCYTGINCLDPFANCVNLKNLHLSEMSFKSDLNPKDFVISAPQLCN 1160
                           CYTG +CLDPFANCV+LKNLHLSEMSF SDLN KDFVISAP+L N
Sbjct: 242  GFTTLTTLHLNNFILCYTGTDCLDPFANCVHLKNLHLSEMSFNSDLNSKDFVISAPKLSN 301

Query: 1161 LSLMCNRFRCKIVVAAPRLTNFTYLYSTPCAFFEFSLPSLDGLVIDIHESHDRLEKPHRK 1340
            L+LMCNRF+CKIVVAAP+L+NF YLYSTPCAFFEF LPS+DGL+IDIHE H R EK  R+
Sbjct: 302  LNLMCNRFKCKIVVAAPQLSNFIYLYSTPCAFFEFRLPSMDGLIIDIHEPHYRFEKCRRR 361

Query: 1341 KREETLHGLINMLRGRQKAEAVKLSFCTVAVTCGNAASIKPECLSYSKLKSLNFGVGSTY 1520
            KR+ETLHGLINMLRG   AEAVKLSF TV V CG +A +KPECL  SKLKSLNFGVGSTY
Sbjct: 362  KRKETLHGLINMLRGHHSAEAVKLSFSTVKVICGASALVKPECLPSSKLKSLNFGVGSTY 421

Query: 1521 KIFINNLDHITAYFRDCSQHADFEILTV 1604
            KIFINNLDHITAYFR+CSQHADFEI+TV
Sbjct: 422  KIFINNLDHITAYFRNCSQHADFEIVTV 449


>ref|XP_003627116.1| F-box/LRR-repeat protein [Medicago truncatula]
            gi|355521138|gb|AET01592.1| F-box/LRR-repeat protein
            [Medicago truncatula]
          Length = 425

 Score =  683 bits (1763), Expect = 0.0
 Identities = 329/423 (77%), Positives = 357/423 (84%)
 Frame = +3

Query: 336  KTGFQESGPVMKKSKNAILASQNVDNCIVAESQGRLDDMPDCLIHHILSFMETKDAVRTC 515
            KT FQESG VMK+SK   L SQ+V NC+    Q RL DMPDCLIHHILSFMET+DA+RTC
Sbjct: 3    KTSFQESGSVMKRSKKTTLISQHVYNCVATGHQDRLGDMPDCLIHHILSFMETRDAIRTC 62

Query: 516  VLSKRWRYLWTSIPCLNFSSKSFTRLVDFKKFVLWVLSHRDSSHVKFLVYYRFGVDYATD 695
            VLSKRWRY+W SIPCL F+SKSFTRLVDFKKFVLWVLSHRD+SHVK L+YYRFGVDYATD
Sbjct: 63   VLSKRWRYIWKSIPCLYFNSKSFTRLVDFKKFVLWVLSHRDNSHVKVLIYYRFGVDYATD 122

Query: 696  QYLLNKVIEYATSHGVEEIRINLRAKTSGSPPVEIPLSLFSCQSLKRLELKDCHPTNATI 875
            QYLLNKVIEYA  HGVEEIRINLRAKTSG PP+EIPL LF+CQSLKRLELKDCHPTN + 
Sbjct: 123  QYLLNKVIEYAALHGVEEIRINLRAKTSGCPPIEIPLPLFTCQSLKRLELKDCHPTNVSS 182

Query: 876  PLGCKSLDVLHLEHFTMYPTAADFSNPXXXXXXXXXXXXXXXXXXXXXXXCYTGINCLDP 1055
            P GCKSLD+LHLEHF+M+PTAADFSNP                       CYTG+ CLDP
Sbjct: 183  PFGCKSLDILHLEHFSMFPTAADFSNPFASLSELFGFTTLTALHLNSFALCYTGMECLDP 242

Query: 1056 FANCVNLKNLHLSEMSFKSDLNPKDFVISAPQLCNLSLMCNRFRCKIVVAAPRLTNFTYL 1235
            FANCVNLK L LSEMSFKSDL+PKDFVISAPQL NLSL+CNRFRCKI V +P+L NF+YL
Sbjct: 243  FANCVNLKILQLSEMSFKSDLSPKDFVISAPQLSNLSLICNRFRCKIAVTSPQLLNFSYL 302

Query: 1236 YSTPCAFFEFSLPSLDGLVIDIHESHDRLEKPHRKKREETLHGLINMLRGRQKAEAVKLS 1415
            YSTPCAFFEFSLPSLDGL+ID+HE H+ LEK HR KREETLHGLINMLRG  KAEAVKLS
Sbjct: 303  YSTPCAFFEFSLPSLDGLIIDVHELHEPLEKSHRNKREETLHGLINMLRGHHKAEAVKLS 362

Query: 1416 FCTVAVTCGNAASIKPECLSYSKLKSLNFGVGSTYKIFINNLDHITAYFRDCSQHADFEI 1595
            FCTVAVTCG AA  KPECLSYSK KSLNFGVGSTYKIFI+ LDHITAYFR+CSQH DFEI
Sbjct: 363  FCTVAVTCGAAALEKPECLSYSKWKSLNFGVGSTYKIFISKLDHITAYFRNCSQHVDFEI 422

Query: 1596 LTV 1604
            + +
Sbjct: 423  VNI 425


>gb|ABD28502.1| Cyclin-like F-box [Medicago truncatula]
          Length = 431

 Score =  491 bits (1264), Expect = e-136
 Identities = 256/432 (59%), Positives = 303/432 (70%), Gaps = 9/432 (2%)
 Frame = +3

Query: 336  KTGFQESGPVMKKSKNAI--LASQNVDNCIVAESQGRLDDMPDCLIHHILSFMETKDAVR 509
            +TGF  S  ++KK + ++   A Q+ DN    E +   DD+PDC++ HILSFMETKDAVR
Sbjct: 3    ETGFPGSRRILKKLRPSMPDSARQDKDNNEAVEGEDMFDDIPDCVVRHILSFMETKDAVR 62

Query: 510  TCVLSKRWRYLWTSIPCLNFSSKSFTRLVDFKKFVLWVLSHRDSSHVKFLVYYRFGVDYA 689
            TCVLSKRW  LWTS+P LNF+SKSF+RL DF+KFVLWVL  RDSS VK L Y R GVDYA
Sbjct: 63   TCVLSKRWTCLWTSVPSLNFNSKSFSRLADFRKFVLWVLFRRDSSAVKVLTYCRAGVDYA 122

Query: 690  TDQYLLNKVIEYATSHGVEEIRINLRAKTSGSPPVEIPLSLFSCQSLKRLELKDCHPTNA 869
            TDQ L NKVI++ATS GVEEIR+NLRAK  GSPPV+IPLSL  C+SLKRLELKDCHP   
Sbjct: 123  TDQNLFNKVIDHATSRGVEEIRVNLRAKVHGSPPVDIPLSLLKCESLKRLELKDCHPMKV 182

Query: 870  TIPLGC-KSLDVLHLEHFTMYPTAADFSNPXXXXXXXXXXXXXXXXXXXXXXXCYTGINC 1046
            T PL C   + +L LEHFTM     DFS                         C TG   
Sbjct: 183  TWPLACVPEIKLLRLEHFTMDHARLDFSKSFATLGNLFGFATLTTLNLSNLILCCTGNES 242

Query: 1047 LDPFANCVNLKNLHLSEMSFKSDLNPKDFVISAPQLCNLSLMCNRFRCKIVVAAPRLTNF 1226
            L+P  +CVNLKNL+L E+ FKS+L P DF+ISAPQL NL+LMCNRF+CK+V+ AP+L NF
Sbjct: 243  LNPIGSCVNLKNLYLREVCFKSELVPNDFMISAPQLNNLTLMCNRFKCKLVIDAPQLINF 302

Query: 1227 TYLYSTPCAFFEFSLPSLDGLVIDIHESHDRLEKPHRKKREETLHGLINMLRGRQKAEAV 1406
            +YLYS+PCAFFEFS+PS + L IDI E ++ LE+ H+K RE+T HGLINM R    AE  
Sbjct: 303  SYLYSSPCAFFEFSIPSANNLTIDIREPNNNLEESHQKTREKTCHGLINMSRECHDAE-- 360

Query: 1407 KLSFCTVAVTCGNA------ASIKPECLSYSKLKSLNFGVGSTYKIFINNLDHITAYFRD 1568
             LSF T  V+CG A       S K EC +  KLKSLN  VGSTYKIFI++LDHITAYFR 
Sbjct: 361  -LSFSTTMVSCGTAVMPKEECSTKEECSTLRKLKSLNLSVGSTYKIFISDLDHITAYFRR 419

Query: 1569 CSQHADFEILTV 1604
            CSQH DFEI+ V
Sbjct: 420  CSQHEDFEIMPV 431


>ref|XP_003597596.1| Polygalacturonase [Medicago truncatula] gi|355486644|gb|AES67847.1|
            Polygalacturonase [Medicago truncatula]
          Length = 548

 Score =  490 bits (1261), Expect = e-136
 Identities = 255/430 (59%), Positives = 302/430 (70%), Gaps = 9/430 (2%)
 Frame = +3

Query: 336  KTGFQESGPVMKKSKNAI--LASQNVDNCIVAESQGRLDDMPDCLIHHILSFMETKDAVR 509
            +TGF  S  ++KK + ++   A Q+ DN    E +   DD+PDC++ HILSFMETKDAVR
Sbjct: 3    ETGFPGSRRILKKLRPSMPDSARQDKDNNEAVEGEDMFDDIPDCVVRHILSFMETKDAVR 62

Query: 510  TCVLSKRWRYLWTSIPCLNFSSKSFTRLVDFKKFVLWVLSHRDSSHVKFLVYYRFGVDYA 689
            TCVLSKRW  LWTS+P LNF+SKSF+RL DF+KFVLWVL  RDSS VK L Y R GVDYA
Sbjct: 63   TCVLSKRWTCLWTSVPSLNFNSKSFSRLADFRKFVLWVLFRRDSSAVKVLTYCRAGVDYA 122

Query: 690  TDQYLLNKVIEYATSHGVEEIRINLRAKTSGSPPVEIPLSLFSCQSLKRLELKDCHPTNA 869
            TDQ L NKVI++ATS GVEEIR+NLRAK  GSPPV+IPLSL  C+SLKRLELKDCHP   
Sbjct: 123  TDQNLFNKVIDHATSRGVEEIRVNLRAKVHGSPPVDIPLSLLKCESLKRLELKDCHPMKV 182

Query: 870  TIPLGC-KSLDVLHLEHFTMYPTAADFSNPXXXXXXXXXXXXXXXXXXXXXXXCYTGINC 1046
            T PL C   + +L LEHFTM     DFS                         C TG   
Sbjct: 183  TWPLACVPEIKLLRLEHFTMDHARLDFSKSFATLGNLFGFATLTTLNLSNLILCCTGNES 242

Query: 1047 LDPFANCVNLKNLHLSEMSFKSDLNPKDFVISAPQLCNLSLMCNRFRCKIVVAAPRLTNF 1226
            L+P  +CVNLKNL+L E+ FKS+L P DF+ISAPQL NL+LMCNRF+CK+V+ AP+L NF
Sbjct: 243  LNPIGSCVNLKNLYLREVCFKSELVPNDFMISAPQLNNLTLMCNRFKCKLVIDAPQLINF 302

Query: 1227 TYLYSTPCAFFEFSLPSLDGLVIDIHESHDRLEKPHRKKREETLHGLINMLRGRQKAEAV 1406
            +YLYS+PCAFFEFS+PS + L IDI E ++ LE+ H+K RE+T HGLINM R    AE  
Sbjct: 303  SYLYSSPCAFFEFSIPSANNLTIDIREPNNNLEESHQKTREKTCHGLINMSRECHDAE-- 360

Query: 1407 KLSFCTVAVTCGNA------ASIKPECLSYSKLKSLNFGVGSTYKIFINNLDHITAYFRD 1568
             LSF T  V+CG A       S K EC +  KLKSLN  VGSTYKIFI++LDHITAYFR 
Sbjct: 361  -LSFSTTMVSCGTAVMPKEECSTKEECSTLRKLKSLNLSVGSTYKIFISDLDHITAYFRR 419

Query: 1569 CSQHADFEIL 1598
            CSQH DFEI+
Sbjct: 420  CSQHEDFEII 429


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